EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND xref_links:"pdb" AND citation_journal_name:"TO BE PUBLISHED" AND release_date:[2022-01-01T00:00:00Z TO 2022-12-31T23:59:59Z] AND author_orcid:"0000-0003-4446-5128"

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EMD-25527

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Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 1(delta dII)

Release date: July 13, 2022
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7syg
Q-score: 0.327

Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J

To Be Published

Sample:

Us10 (13 kDa, Protein from Oryctolagus cuniculus)
Es29 (6 kDa, Protein from Oryctolagus cuniculus)
Us8 (14 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal small subunit with hcv ires (2 MDa, Complex from Oryctolagus cuniculus)
40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
Es6 (28 kDa, Protein from Oryctolagus cuniculus)
Es28 (7 kDa, Protein from Oryctolagus cuniculus)
Es21 (9 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s2 (24 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein sa (32 kDa, Protein from Oryctolagus cuniculus)
Us9 (19 kDa, Protein from Oryctolagus cuniculus)
60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
Us13 (17 kDa, Protein from Oryctolagus cuniculus)
Us19 (17 kDa, Protein from Oryctolagus cuniculus)
Es19 (16 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
Us15 (17 kDa, Protein from Oryctolagus cuniculus)
Es17 (15 kDa, Protein from Oryctolagus cuniculus)
Us4 (22 kDa, Protein from Oryctolagus cuniculus)
Es30 (14 kDa, Protein from Oryctolagus cuniculus)
Zinc ion (65 Da, Ligand)
Es8 (24 kDa, Protein from Oryctolagus cuniculus)
Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
Us7 (22 kDa, Protein from Oryctolagus cuniculus)
Es27 (9 kDa, Protein from Oryctolagus cuniculus)
Us11 (18 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s27a (21 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
Us17 (18 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
Es12 (14 kDa, Protein from Oryctolagus cuniculus)
Us12 (15 kDa, Protein from Oryctolagus cuniculus)
Es10 (17 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
Us3 (31 kDa, Protein from Oryctolagus cuniculus)
Es26 (11 kDa, Protein from Oryctolagus cuniculus)
Rack1 (35 kDa, Protein from Oryctolagus cuniculus)

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EMD-25528

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Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 2(delta dII)

Release date: July 13, 2022
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7syh
Q-score: 0.271

Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J

To Be Published

Sample:

Us15 (17 kDa, Protein from rabbit)
Es12 (14 kDa, Protein from rabbit)
Us5 (s2) (24 kDa, Protein from rabbit)
Es28 (7 kDa, Protein from rabbit)
Us3 (31 kDa, Protein from rabbit)
Us7 (22 kDa, Protein from rabbit)
40s ribosomal protein s7 (47 kDa, Protein from rabbit)
Us8 (14 kDa, Protein from rabbit)
40s ribosomal small subunit with hcv ires (2 MDa, Complex from Oryctolagus cuniculus)
Us10 (13 kDa, Protein from rabbit)
40s ribosomal protein s24 (15 kDa, Protein from rabbit)
40s ribosomal protein s4 (29 kDa, Protein from rabbit)
40s ribosomal protein s26 (11 kDa, Protein from rabbit)
Es17 (15 kDa, Protein from rabbit)
Es30 (14 kDa, Protein from rabbit)
40s ribosomal protein s3a (30 kDa, Protein from rabbit)
Us19 (17 kDa, Protein from rabbit)
Us17 (18 kDa, Protein from rabbit)
60s ribosomal protein l41 (3 kDa, Protein from rabbit)
Es6 (28 kDa, Protein from rabbit)
Us12 (15 kDa, Protein from rabbit)
40s ribosomal protein s27a (21 kDa, Protein from rabbit)
40s ribosomal protein sa (32 kDa, Protein from rabbit)
Us13 (17 kDa, Protein from rabbit)
Zinc ion (65 Da, Ligand)
Rack1 (35 kDa, Protein from rabbit)
Es29 (6 kDa, Protein from rabbit)
Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
Us4 (22 kDa, Protein from rabbit)
40s ribosomal protein s21 (9 kDa, Protein from rabbit)
18s rrna (603 kDa, RNA from rabbit)
Es19 (16 kDa, Protein from rabbit)
Es27 (9 kDa, Protein from rabbit)
Us11 (18 kDa, Protein from rabbit)
Es10 (17 kDa, Protein from rabbit)
40s ribosomal protein s25 (13 kDa, Protein from rabbit)
Us9 (19 kDa, Protein from rabbit)
Es8 (24 kDa, Protein from rabbit)

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EMD-25533

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Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 7(delta dII)

Release date: July 13, 2022
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7sym
Q-score: 0.341

Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J

To Be Published

Sample:

Us10 (13 kDa, Protein from Oryctolagus cuniculus)
Es29 (6 kDa, Protein from Oryctolagus cuniculus)
Us8 (14 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
Es6 (28 kDa, Protein from Oryctolagus cuniculus)
Es28 (7 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s2 (24 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein sa (32 kDa, Protein from Oryctolagus cuniculus)
Us9 (19 kDa, Protein from Oryctolagus cuniculus)
60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
Us13 (17 kDa, Protein from Oryctolagus cuniculus)
Us19 (17 kDa, Protein from Oryctolagus cuniculus)
Es19 (16 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
Us15 (17 kDa, Protein from Oryctolagus cuniculus)
Es17 (15 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s21 (9 kDa, Protein from Oryctolagus cuniculus)
Us4 (22 kDa, Protein from Oryctolagus cuniculus)
Es30 (14 kDa, Protein from Oryctolagus cuniculus)
Zinc ion (65 Da, Ligand)
Es8 (24 kDa, Protein from Oryctolagus cuniculus)
Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
Us7 (22 kDa, Protein from Oryctolagus cuniculus)
Es27 (9 kDa, Protein from Oryctolagus cuniculus)
Us11 (18 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s27a (21 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal small subunit with hcv ires (2 MDa, Complex)
40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
Us17 (18 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
Es12 (14 kDa, Protein from Oryctolagus cuniculus)
Us12 (15 kDa, Protein from Oryctolagus cuniculus)
Es10 (17 kDa, Protein from Oryctolagus cuniculus)
Es26 (s26) (11 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
Us3 (31 kDa, Protein from Oryctolagus cuniculus)
Rack1 (35 kDa, Protein from Oryctolagus cuniculus)

[Show more]

EMD-25534

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Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII)

Release date: July 13, 2022
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7syn
Q-score: 0.395

Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J

To Be Published

Sample:

Us12 (15 kDa, Protein from rabbit)
Us15 (17 kDa, Protein from rabbit)
Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
Us7 (22 kDa, Protein from rabbit)
Es7 (47 kDa, Protein from rabbit)
Es21 (9 kDa, Protein from rabbit)
Es8 (24 kDa, Protein from rabbit)
40s ribosomal protein s2 (24 kDa, Protein from rabbit)
El41 (3 kDa, Protein from rabbit)
Us19 (17 kDa, Protein from rabbit)
18s rrna (603 kDa, RNA from rabbit)
Receptor for activated c kinase 1 (rack1) (35 kDa, Protein from rabbit)
40s ribosomal small subunit with hcv ires (2 MDa, Complex from Oryctolagus cuniculus)
Es4 (s4 x isoform) (29 kDa, Protein from rabbit)
Us13 (17 kDa, Protein from rabbit)
Zinc ion (65 Da, Ligand)
Es12 (14 kDa, Protein from rabbit)
Us10 (13 kDa, Protein from rabbit)
Es1 (30 kDa, Protein from rabbit)
Us8 (14 kDa, Protein from rabbit)
Us14 (6 kDa, Protein from rabbit)
Es19 (16 kDa, Protein from rabbit)
Es26 (11 kDa, Protein from rabbit)
Us11 (18 kDa, Protein from rabbit)
Us9 (19 kDa, Protein from rabbit)
Us17 (18 kDa, Protein from rabbit)
Es31 (21 kDa, Protein from rabbit)
Es24 (15 kDa, Protein from rabbit)
Es28 (7 kDa, Protein from rabbit)
Es10 (17 kDa, Protein from rabbit)
Us3 (31 kDa, Protein from rabbit)
Es30 (14 kDa, Protein from rabbit)
Es25 (13 kDa, Protein from rabbit)
Es6 (28 kDa, Protein from rabbit)
Es27 (9 kDa, Protein from rabbit)
Us4 (22 kDa, Protein from rabbit)
Es17 (15 kDa, Protein from rabbit)
Us2 (sa) (32 kDa, Protein from rabbit)

[Show more]

Sort by: Download

Showing 1 - 4 of 4. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [4]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: