Electron Microscopy Data Bank

EMD-20172

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Release date: June 24, 2020
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6oqw
Q-score: 0.487

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ Pubmed: 32457314 DOI: doi:10.1038/s41467-020-16387-2 ]

Sample:

Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli 2-427-07 S4 C3)
Atp synthase subunit b (17 kDa, Protein from Escherichia coli 2-427-07 S4 C3)
Atp synthase gamma chain (31 kDa, Protein from Escherichia coli chi7122)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli Xuzhou21)
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli O145:NM)
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli)
Phosphate ion (94 Da, Ligand)
Adenosine-5'-diphosphate (427 Da, Ligand)
Magnesium ion (24 Da, Ligand)

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EMD-20167

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E. coli ATP Synthase ADP State 1a

Release date: June 3, 2020
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6oqr
Q-score: 0.515

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ Pubmed: 32457314 DOI: doi:10.1038/s41467-020-16387-2 ]

Sample:

Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli )
Atp synthase subunit b (17 kDa, Protein from Escherichia coli )
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli)
Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli)
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Phosphate ion (94 Da, Ligand)
Adenosine-5'-diphosphate (427 Da, Ligand)
Magnesium ion (24 Da, Ligand)
Atp synthase gamma chain (31 kDa, Protein from Escherichia coli)

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EMD-20168

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E. coli ATP synthase State 1b

Release date: June 3, 2020
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6oqs
Q-score: 0.49

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ DOI: doi:10.1038/s41467-020-16387-2 Pubmed: 32457314 ]

Sample:

Atp synthase gamma chain (31 kDa, Protein from Escherichia coli )
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli )
Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Magnesium ion (24 Da, Ligand)
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli)
Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli )
Adenosine-5'-diphosphate (427 Da, Ligand)
Atp synthase subunit b (17 kDa, Protein from Escherichia coli)
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Phosphate ion (94 Da, Ligand)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli )

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EMD-20169

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E. coli ATP synthase State 1c

Release date: June 3, 2020
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6oqt
Q-score: 0.531

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ DOI: doi:10.1038/s41467-020-16387-2 Pubmed: 32457314 ]

Sample:

Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli)
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Magnesium ion (24 Da, Ligand)
Atp synthase subunit b (17 kDa, Protein from Escherichia coli)
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli)
Adenosine-5'-diphosphate (427 Da, Ligand)
Atp synthase gamma chain (31 kDa, Protein from Escherichia coli)
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Phosphate ion (94 Da, Ligand)

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EMD-20170

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E. coli ATP synthase State 1d

Release date: June 3, 2020
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6oqu
Q-score: 0.518

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ DOI: doi:10.1038/s41467-020-16387-2 Pubmed: 32457314 ]

Sample:

Atp synthase gamma chain (31 kDa, Protein from Escherichia coli )
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli )
Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Magnesium ion (24 Da, Ligand)
Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli )
Adenosine-5'-diphosphate (427 Da, Ligand)
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Phosphate ion (94 Da, Ligand)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli )
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli )
Atp synthase subunit b (17 kDa, Protein from Escherichia coli )

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EMD-20171

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E. coli ATP Synthase State 2b

Release date: June 3, 2020
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6oqv
Q-score: 0.501

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ DOI: doi:10.1038/s41467-020-16387-2 Pubmed: 32457314 ]

Sample:

Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli)
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Magnesium ion (24 Da, Ligand)
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli)
Adenosine-5'-diphosphate (427 Da, Ligand)
Atp synthase gamma chain (31 kDa, Protein from Escherichia coli)
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Phosphate ion (94 Da, Ligand)
Atp synthase subunit b (17 kDa, Protein from Escherichia coli )

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EMD-20454

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E. coli ATP Synthase State 1e

Release date: June 3, 2020
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6pqv
Q-score: 0.501

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ Pubmed: 32457314 DOI: doi:10.1038/s41467-020-16387-2 ]

Sample:

Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli )
Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit b (17 kDa, Protein from Escherichia coli )
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli )
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli )
Atp synthase gamma chain (31 kDa, Protein from Escherichia coli )
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli )
Adenosine-5'-diphosphate (427 Da, Ligand)
Magnesium ion (24 Da, Ligand)
Phosphate ion (94 Da, Ligand)

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EMD-21855

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E. coli ATP synthase State 3b

Release date: June 3, 2020
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6wnr
Q-score: 0.464

Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG

Nat Commun (2020) 11 pp. 2615-2615 [ DOI: doi:10.1038/s41467-020-16387-2 Pubmed: 32457314 ]

Sample:

Atp synthase epsilon chain (15 kDa, Protein from Escherichia coli)
Atp synthase subunit a (30 kDa, Protein from Escherichia coli)
Adenosine-5'-triphosphate (507 Da, Ligand)
Atp synthase subunit c (8 kDa, Protein from Escherichia coli)
Magnesium ion (24 Da, Ligand)
Atp synthase subunit b (17 kDa, Protein from Escherichia coli)
Atp synthase subunit delta (19 kDa, Protein from Escherichia coli)
Atp synthase subunit alpha (55 kDa, Protein from Escherichia coli)
Atp synthase subunit beta (51 kDa, Protein from Escherichia coli)
Adenosine-5'-diphosphate (427 Da, Ligand)
Atp synthase gamma chain (31 kDa, Protein from Escherichia coli)
E. coli atp synthase (558 kDa, Complex from Escherichia coli)
Phosphate ion (94 Da, Ligand)

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