EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND xref_links:"pdb" AND natural_source_ncbi_code:"562" AND resolution:[0 TO 2} AND assembly_molecular_weight:{250000 TO 500000]

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EMD-14441

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E. coli C-P lyase bound to a PhnK/PhnL dual ABC dimer and ADP + Pi

Release date: June 22, 2022
Resolution: 1.93 Å
EM Method: Single-particle
Fitted PDBs: 7z15
Q-score: 0.688

Amstrup SK, Ong SC, Sofos N, Karlsen JL, Skjerning RB, Boesen T, Enghild JJ, Hove-Jensen B, Brodersen DE

Nat Commun (2023) 14 pp. 1001-1001 [ Pubmed: 36813778 DOI: doi:10.1038/s41467-023-36604-y ]

Sample:

Adenosine-5'-triphosphate (507 Da, Ligand)
Putative phosphonates utilization atp-binding protein phnk (31 kDa, Protein from Escherichia coli)
Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni (38 kDa, Protein from Escherichia coli)
Alpha-d-ribose-1,2-cyclic-phosphate-5-phosphate (292 Da, Ligand)
Magnesium ion (24 Da, Ligand)
Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phng (16 kDa, Protein from Escherichia coli)
Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnl (24 kDa, Protein from Escherichia coli)
Adenosine-5'-diphosphate (427 Da, Ligand)
Water (18 Da, Ligand)
Alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase (31 kDa, Protein from Escherichia coli)
Phosphate ion (94 Da, Ligand)
Zinc ion (65 Da, Ligand)
Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh (21 kDa, Protein from Escherichia coli)
E. coli c-p lyase bound to a phnk/phnl dual abc dimer and adp + pi (327 kDa, Complex from Escherichia coli)

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EMD-14444

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E. coli C-P lyase bound to a PhnK ABC dimer and ATP

Release date: May 25, 2022
Resolution: 1.98 Å
EM Method: Single-particle
Fitted PDBs: 7z18
Q-score: 0.666

Amstrup SK, Ong SC, Sofos N, Karlsen JL, Skjerning RB, Boesen T, Enghild JJ, Hove-Jensen B, Brodersen DE

Nat Commun (2023) 14 pp. 1001-1001 [ Pubmed: 36813778 DOI: doi:10.1038/s41467-023-36604-y ]

Sample:

Adenosine-5'-triphosphate (507 Da, Ligand)
Putative phosphonates utilization atp-binding protein phnk (31 kDa, Protein from Escherichia coli)
Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni (38 kDa, Protein from Escherichia coli)
Alpha-d-ribose-1,2-cyclic-phosphate-5-phosphate (292 Da, Ligand)
Magnesium ion (24 Da, Ligand)
Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phng (16 kDa, Protein from Escherichia coli)
Water (18 Da, Ligand)
Alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase (31 kDa, Protein from Escherichia coli)
E. coli c-p lyase bound to a phnk abc dimer and atp (277 kDa, Complex from Escherichia coli)
Zinc ion (65 Da, Ligand)
Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh (21 kDa, Protein from Escherichia coli)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

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