Endogenous substrate adenine bound state of Arabidopsis AZG1 at pH 5.5
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8irm
Q-score: 0.601
Xu L, Jia W, Tao X, Ye F, Zhang Y, Ding ZJ, Zheng SJ, Qiao S, Su N, Zhang Y, Wu S, Guo J
Nat Plants (2024) 10 pp. 180-191 [ DOI: doi:10.1038/s41477-023-01590-y Pubmed: 38172575 ]
- Water (18 Da, Ligand)
- Adenine/guanine permease azg1 (65 kDa, Protein from Arabidopsis thaliana)
- Complex of azg1 and adenine (131 kDa, Complex from Arabidopsis thaliana)
- Adenine (135 Da, Ligand)
6-BAP bound state of Arabidopsis AZG1
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8irn
Q-score: 0.595
Xu L, Jia W, Tao X, Ye F, Zhang Y, Ding ZJ, Zheng SJ, Qiao S, Su N, Zhang Y, Wu S, Guo J
Nat Plants (2024) 10 pp. 180-191 [ DOI: doi:10.1038/s41477-023-01590-y Pubmed: 38172575 ]
- N-benzyl-9h-purin-6-amine (225 Da, Ligand)
- Complex of azg1 and 6-bap (131 kDa, Complex from Arabidopsis thaliana)
- Water (18 Da, Ligand)
- Adenine/guanine permease azg1 (65 kDa, Protein from Arabidopsis thaliana)
trans-Zeatin bound state of Arabidopsis AZG1 at pH7.4
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8iro
Q-score: 0.62
Xu L, Jia W, Tao X, Ye F, Zhang Y, Ding ZJ, Zheng SJ, Qiao S, Su N, Zhang Y, Wu S, Guo J
Nat Plants (2024) 10 pp. 180-191 [ Pubmed: 38172575 DOI: doi:10.1038/s41477-023-01590-y ]
- Complex of azg1 and trans-zeatin (131 kDa, Complex from Arabidopsis thaliana)
- Adenine/guanine permease azg1 (65 kDa, Protein from Arabidopsis thaliana)
- Water (18 Da, Ligand)
- (2e)-2-methyl-4-(9h-purin-6-ylamino)but-2-en-1-ol (219 Da, Ligand)
kinetin bound state of Arabidopsis AZG1
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8irp
Q-score: 0.591
Xu L, Jia W, Tao X, Ye F, Zhang Y, Ding ZJ, Zheng SJ, Qiao S, Su N, Zhang Y, Wu S, Guo J
Nat Plants (2024) 10 pp. 180-191 [ DOI: doi:10.1038/s41477-023-01590-y Pubmed: 38172575 ]
- Complex of azg1 and kinetin (131 kDa, Complex from Arabidopsis thaliana)
- Water (18 Da, Ligand)
- Adenine/guanine permease azg1 (65 kDa, Protein from Arabidopsis thaliana)
- N-(furan-2-ylmethyl)-7h-purin-6-amine (215 Da, Ligand)
trans-Zeatin bound state of Arabidopsis AZG1 at pH5.5
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8wmq
Q-score: 0.493
Xu L, Jia W, Tao X, Ye F, Zhang Y, Ding ZJ, Zheng SJ, Qiao S, Su N, Zhang Y, Wu S, Guo J
Nat Plants (2024) 10 pp. 180-191 [ DOI: doi:10.1038/s41477-023-01590-y Pubmed: 38172575 ]
- Complex of azg1 and trans-zeatin (131 kDa, Complex from Arabidopsis thaliana)
- Adenine/guanine permease azg1 (65 kDa, Protein from Arabidopsis thaliana)
- (2e)-2-methyl-4-(9h-purin-6-ylamino)but-2-en-1-ol (219 Da, Ligand)
Resolution: 2.62 Å
EM Method: Single-particle
Fitted PDBs: 7wkw
Q-score: 0.448
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 7xxb
Q-score: 0.526
Su N, Zhu A, Tao X, Ding ZJ, Chang S, Ye F, Zhang Y, Zhao C, Chen Q, Wang J, Zhou CY, Guo Y, Jiao S, Zhang S, Wen H, Ma L, Ye S, Zheng SJ, Yang F, Wu S, Guo J
Nature (2022) 609 pp. 616-621 [ DOI: doi:10.1038/s41586-022-05142-w Pubmed: 35917926 ]
- Iaa-bound state atpin3(atpin3-iaa) (Complex from Arabidopsis thaliana)
- 1h-indol-3-ylacetic acid (175 Da, Ligand)
- Auxin efflux carrier component 3 (73 kDa, Protein from Arabidopsis thaliana)
Ligand-triggered allosteric ADP release primes a plant NLR complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6j5u
Q-score: 0.365
Wang J, Wang J, Hu M, Wu S, Qi J, Wang G, Han Z, Qi Y, Gao N, Wang HW, Zhou JM, Chai J
Science (2019) 364 [ DOI: doi:10.1126/science.aav5868 Pubmed: 30948526 ]
- Probable serine/threonine-protein kinase pbl2 (46 kDa, Protein from Arabidopsis thaliana)
- Zar1-rks1 with adp complex (130 kDa, Complex from Arabidopsis)
- Protein kinase superfamily protein (40 kDa, Protein from Arabidopsis thaliana)
- Disease resistance rpp13-like protein 4 (97 kDa, Protein from Arabidopsis thaliana)
- Uridine-5'-monophosphate (324 Da, Ligand)
Ligand-triggered allosteric ADP release primes a plant NLR complex
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 6j5v
Q-score: 0.354
Wang J, Wang J, Hu M, Wu S, Qi J, Wang G, Han Z, Qi Y, Gao N, Wang HW, Zhou JM, Chai J
Science (2019) 364 [ Pubmed: 30948526 DOI: doi:10.1126/science.aav5868 ]
- Probable serine/threonine-protein kinase pbl2 (46 kDa, Protein from Arabidopsis thaliana)
- Zar1-rks1 with adp complex (130 kDa, Complex from Arabidopsis)
- Disease resistance rpp13-like protein 4 (97 kDa, Protein from Arabidopsis thaliana)
- Uridine-5'-monophosphate (324 Da, Ligand)
- Protein kinase superfamily protein (40 kDa, Protein from Arabidopsis thaliana)
Ligand-triggered allosteric ADP release primes a plant NLR complex
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6j5w
Q-score: 0.452
Wang J, Wang J, Hu M, Wu S, Qi J, Wang G, Han Z, Qi Y, Gao N, Wang HW, Zhou JM, Chai J
Science (2019) 364 [ Pubmed: 30948526 DOI: doi:10.1126/science.aav5868 ]
- Rks1 (40 kDa, Protein from Arabidopsis thaliana)
- Disease resistance rpp13-like protein 4 (97 kDa, Protein from Arabidopsis thaliana)
- Zar1-rks1 with adp complex (130 kDa, Complex from Arabidopsis)
- Adenosine-5'-diphosphate (427 Da, Ligand)