Atomic structure of wheat ribosome reveals unique features of the plant ribosomes
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8jiv
Q-score: 0.649
Mishra RK, Sharma P, Khaja FT, Uday AB, Hussain T
Structure (2024) 32 pp. 562- [ Pubmed: 38458197 DOI: doi:10.1016/j.str.2024.02.006 ]
- The large subunit of wheat ribosome (Complex from Triticum aestivum)
- Ribosomal protein l37 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l7a (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l4 c-terminal domain-containing protein (44 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el33 (12 kDa, Protein from Triticum aestivum)
- Ubiquitin-like domain-containing protein (14 kDa, Protein from Triticum aestivum)
- Ribosomal l28e/mak16 domain-containing protein (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul22 (19 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l11 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l34 (13 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l35 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l31 (14 kDa, Protein from Triticum aestivum)
- 5.8s rrna (50 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein l13 (24 kDa, Protein from Triticum aestivum)
- Potassium ion (39 Da, Ligand)
- 60s ribosomal protein l36 (12 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- 5s rrna (38 kDa, RNA from Triticum aestivum)
- Ribosomal protein l18e/l15p domain-containing protein (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l38 (8 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l21 (18 kDa, Protein from Triticum aestivum)
- Ribosomal protein l10e/l16 domain-containing protein (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l27 (15 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (12 kDa, Protein from Triticum aestivum)
- Ribosomal protein l19 (24 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein l39 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el32 (15 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (16 kDa, Protein from Triticum aestivum)
- Ribosomal protein l6 alpha-beta domain-containing protein (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l18a (21 kDa, Protein from Triticum aestivum)
- Trash domain-containing protein (18 kDa, Protein from Triticum aestivum)
- Ribosomal protein l7ae/l30e/s12e/gadd45 domain-containing protein (12 kDa, Protein from Triticum aestivum)
- Ribosomal protein l13a (23 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul30 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l37a, expressed (10 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l29 (6 kDa, Protein from Triticum aestivum)
- Ribosomal protein l18e/l15p domain-containing protein (21 kDa, Protein from Triticum aestivum)
- Ribosomal protein l17 (14 kDa, Protein from Triticum aestivum)
- Ribosomal protein l15 (24 kDa, Protein from Triticum aestivum)
- Kow domain-containing protein (14 kDa, Protein from Triticum aestivum)
- Ribosomal protein l3 (44 kDa, Protein from Triticum aestivum)
- Ribosomal protein l5 eukaryotic c-terminal domain-containing protein (35 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein l6 (25 kDa, Protein from Triticum aestivum)
- Ribosomal protein l2 c-terminal domain-containing protein (28 kDa, Protein from Triticum aestivum)
- Ribosomal protein l14e domain-containing protein (15 kDa, Protein from Triticum aestivum)
- 25s rrna (1 MDa, RNA from Triticum aestivum)
Atomic structure of wheat ribosome reveals unique features of the plant ribosomes
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 8jiw
Q-score: 0.481
Mishra RK, Sharma P, Khaja FT, Uday AB, Hussain T
Structure (2024) 32 pp. 562- [ Pubmed: 38458197 DOI: doi:10.1016/j.str.2024.02.006 ]
- Ribosomal protein s10 domain-containing protein (13 kDa, Protein from Triticum aestivum)
- Mitogen-activated protein kinase (36 kDa, Protein from Triticum aestivum)
- Potassium ion (39 Da, Ligand)
- 40s ribosomal protein s11 n-terminal domain-containing protein (18 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s6 (28 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s4 (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s8 (25 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s18 (17 kDa, Protein from Triticum aestivum)
- 30s ribosomal protein s8, chloroplastic (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s15 (17 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s7 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s26 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s14 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s24 (15 kDa, Protein from Triticum aestivum)
- 18s rrna (584 kDa, RNA from Triticum aestivum)
- S5 drbm domain-containing protein (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s29 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s17 (16 kDa, Protein from Triticum aestivum)
- Ribosomal protein s13/s15 n-terminal domain-containing protein (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s30 (6 kDa, Protein from Triticum aestivum)
- The large subunit of wheat ribosome (Complex from Triticum aestivum)
- 60s ribosomal protein l41 (3 kDa, Protein from Triticum aestivum)
- Plectin/s10 n-terminal domain-containing protein (20 kDa, Protein from Triticum aestivum)
- 30s ribosomal protein s4, chloroplastic (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s27 (9 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein s7 domain-containing protein (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s3a (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s23 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s28 (7 kDa, Protein from Triticum aestivum)
- Kh type-2 domain-containing protein (25 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s21 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s25 (10 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein sa (32 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s16 (16 kDa, Protein from Triticum aestivum)
Atomic structure of wheat ribosome reveals unique features of the plant ribosomes
Atomic structure of wheat ribosome reveals unique features of the plant ribosomes
Wheat 80S ribosome stalled on AUG-Stop boron dependently
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ip8
Q-score: 0.579
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]
- 60s ribosomal protein ul30 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el40 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el14 (15 kDa, Protein from Triticum aestivum)
- Eukaryotic release factor 1 (49 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul22 (19 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es6 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el24 (18 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us3 (25 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul29 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es25 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul23 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es30 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el33 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us10 (14 kDa, Protein from Triticum aestivum)
- Rack1 (36 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el34 (13 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el13 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal rna (1 MDa, RNA from Triticum aestivum)
- 60s ribosomal protein el27 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el39 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us17 (17 kDa, Protein from Triticum aestivum)
- 5s ribosomal rna (38 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul6 (21 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es4 (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us7 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us14 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el29 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es28 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es26 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us5 (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el6 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es8 (25 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el38 (8 kDa, Protein from Triticum aestivum)
- Mrna (2 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul15 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el43 (10 kDa, Protein from Triticum aestivum)
- Cca end of e-trna (894 Da, RNA from Triticum aestivum)
- 40s ribosomal protein us13 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us12 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es19 (17 kDa, Protein from Triticum aestivum)
- Trnai (24 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul14 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul3 (44 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es24 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el20 (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul4 (44 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el30 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us2 (33 kDa, Protein from Triticum aestivum)
- 5.8s ribosomal rna (51 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein us11 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul24 (17 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el41 (3 kDa, Protein from Oryza sativa)
- 40s ribosomal protein us19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es1 (30 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el18 (21 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein us4 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us8 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul18 (34 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us9 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us15 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es27 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el19 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es17 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el32 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es21 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul2 (28 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es10 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul13 (23 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el22 (14 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein el42 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul16 (24 kDa, Protein from Triticum aestivum)
- 18s ribosomal rna (583 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein es7 (22 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el37 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul5 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el36 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein el8 (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el21 (18 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el31 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el15 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el28 (16 kDa, Protein from Triticum aestivum)
- Wheat 80s ribosome stalled on aug-stop boron dependently (Complex from Triticum aestivum)
Wheat 40S ribosome in complex with a tRNAi
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ip9
Q-score: 0.53
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]
- 40s ribosomal protein us13 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es19 (17 kDa, Protein from Triticum aestivum)
- Trnai (24 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein es4 (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es6 (28 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es10 (20 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us7 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us3 (25 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es24 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es25 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us14 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es28 (9 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein es30 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us2 (33 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us11 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es26 (16 kDa, Protein from Triticum aestivum)
- 18s ribosomal rna (583 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein us10 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us5 (29 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es7 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es8 (25 kDa, Protein from Triticum aestivum)
- Rack1 (36 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el41 (3 kDa, Protein from Oryza sativa)
- 40s ribosomal protein us19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es1 (30 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- Wheat 40s ribosome in complex with a trnai (Complex from Triticum aestivum)
- 40s ribosomal protein us4 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us8 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us9 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us15 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es27 (9 kDa, Protein from Triticum aestivum)
- Mrna (2 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein s23 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es17 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es21 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us17 (17 kDa, Protein from Triticum aestivum)
Wheat 40S ribosome in complex with a tRNAi and eIF2
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024) 20 pp. 605-614 [ Pubmed: 38267667 DOI: doi:10.1038/s41589-023-01513-0 ]
Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximide
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ipa
Q-score: 0.471
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]
- 60s ribosomal protein ul30 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el40 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el14 (15 kDa, Protein from Triticum aestivum)
- Eukaryotic release factor 1 (49 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul22 (19 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es6 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el24 (18 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us3 (25 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul29 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es25 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul23 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es30 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el33 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us10 (14 kDa, Protein from Triticum aestivum)
- Rack1 (36 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el34 (13 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el13 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal rna (1 MDa, RNA from Triticum aestivum)
- 60s ribosomal protein el27 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el39 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us17 (17 kDa, Protein from Triticum aestivum)
- 5s ribosomal rna (38 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul6 (21 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es4 (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us7 (22 kDa, Protein from Triticum aestivum)
- 4-{(2r)-2-[(1s,3s,5s)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione (281 Da, Ligand)
- 40s ribosomal protein us14 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el29 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es28 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es26 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us5 (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el6 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es8 (25 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el38 (8 kDa, Protein from Triticum aestivum)
- Mrna (2 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul15 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el43 (10 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us13 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us12 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es19 (17 kDa, Protein from Triticum aestivum)
- Wheat 80s ribosome stalled on aug-stop boron dependently with cycloheximide (Complex from Triticum aestivum)
- Trnai (24 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul14 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul3 (44 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es24 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el20 (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul4 (44 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el30 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us2 (33 kDa, Protein from Triticum aestivum)
- 5.8s ribosomal rna (51 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein us11 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul24 (17 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el41 (3 kDa, Protein from Oryza sativa)
- 40s ribosomal protein us19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es1 (30 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el18 (21 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein us4 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us8 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul18 (34 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us9 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us15 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es27 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el19 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es17 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el32 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es21 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul2 (28 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es10 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul13 (23 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el22 (14 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein el42 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul16 (24 kDa, Protein from Triticum aestivum)
- 18s ribosomal rna (583 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein es7 (22 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el37 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul5 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el36 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein el8 (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el21 (18 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el31 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el15 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el28 (16 kDa, Protein from Triticum aestivum)
Wheat 80S ribosome pausing on AUG-Stop with cycloheximide
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ipb
Q-score: 0.466
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]
- 60s ribosomal protein ul30 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el40 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el14 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul22 (19 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es6 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el24 (18 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us3 (25 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul29 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es25 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul23 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es30 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el33 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us10 (14 kDa, Protein from Triticum aestivum)
- Rack1 (36 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el34 (13 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el13 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal rna (1 MDa, RNA from Triticum aestivum)
- 60s ribosomal protein el27 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el39 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us17 (17 kDa, Protein from Triticum aestivum)
- 5s ribosomal rna (38 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul6 (21 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es4 (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us7 (22 kDa, Protein from Triticum aestivum)
- 4-{(2r)-2-[(1s,3s,5s)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione (281 Da, Ligand)
- 40s ribosomal protein us14 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el29 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es28 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es26 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us5 (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el6 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es8 (25 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el38 (8 kDa, Protein from Triticum aestivum)
- Mrna (2 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul15 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el43 (10 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us13 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us12 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es19 (17 kDa, Protein from Triticum aestivum)
- Trnai (24 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul14 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul3 (44 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es24 (15 kDa, Protein from Triticum aestivum)
- Wheat 80s ribosome pausing on aug-stop with cycloheximide (Complex from Triticum aestivum)
- 60s ribosomal protein el20 (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul4 (44 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el30 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us2 (33 kDa, Protein from Triticum aestivum)
- 5.8s ribosomal rna (51 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein us11 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul24 (17 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el41 (3 kDa, Protein from Oryza sativa)
- 40s ribosomal protein us19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es1 (30 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el18 (21 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein us4 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us8 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul18 (34 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us9 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us15 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es27 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el19 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es17 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el32 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es21 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul2 (28 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es10 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul13 (23 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el22 (14 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein el42 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul16 (24 kDa, Protein from Triticum aestivum)
- 18s ribosomal rna (583 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein es7 (22 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el37 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul5 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el36 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein el8 (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el21 (18 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el31 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el15 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el28 (16 kDa, Protein from Triticum aestivum)
Structure of TaHKT2;1 in NaCl at 2.6 Angstroms resolution
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8w9t
Q-score: 0.617
To Be Published
- Water (18 Da, Ligand)
- Hkt2 (60 kDa, Protein from Triticum aestivum)
- Sodium ion (22 Da, Ligand)
- Structure of tahkt2;1 in nacl at 2.6 angstroms resolution (Complex from Arabidopsis thaliana)