Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7q4k
Q-score: 0.514
Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- Msrdl mrna (2 kDa, RNA from Streptococcus pneumoniae)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- Phe-trna (e site) (24 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- Erythromycin-stalled escherichia coli 70s ribosome with streptococcal msrdl nascent chain (Complex)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- Met-trna (p site) (25 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- Msrdl: fme-tyr-leu-ile-phe-met (845 Da, Protein from Streptococcus pneumoniae)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 16s rrna (497 kDa, RNA from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli K-12)
- Erythromycin a (733 Da, Ligand)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
EttA-bound E. coli 70S ribosome complex containing P-site tRNA and A-site tRNA
Resolution: 7.5 Å
EM Method: Single-particle
Fitted PDBs: 3j5s
Q-score: 0.122
Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez Jr RL, Hunt JF, Frank J
Nat Struct Mol Biol (2014) 21 pp. 152-159 [ DOI: doi:10.1038/nsmb.2741 Pubmed: 24389465 ]
- Trnaphe (RNA from Escherichia coli)
- Energy-dependent translational throttle a (etta) (60 kDa, Protein from Escherichia coli)
- 70s ribosome (2 MDa, Complex from Escherichia coli)
- E. coli 70s ribosome complex 70s-etta_eq2-trnafmet-trnaphe (Sample)
- Trnafmet (RNA from Escherichia coli)
EttA-bound E. coli 70S ribosome complex containing P-site tRNA
Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez Jr RL, Hunt JF, Frank J
Nat Struct Mol Biol (2014) 21 pp. 152-159 [ DOI: doi:10.1038/nsmb.2741 Pubmed: 24389465 ]
- E. coli 70s ribosome complex 70s-etta_eq2-trnafmet (Sample)
- Trnafmet (RNA from Escherichia coli)
- 70s ribosome (2 MDa, Complex from Escherichia coli)
- Energy-dependent translational throttle a (etta) (60 kDa, Protein from Escherichia coli)
EttA-bound E. coli 70S ribosome complex containing P-site tRNA and A-site tRNA (raw map)
Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez Jr RL, Hunt JF, Frank J
Nat Struct Mol Biol (2014) 21 pp. 152-159 [ DOI: doi:10.1038/nsmb.2741 Pubmed: 24389465 ]
- Energy-dependent translational throttle a (etta) (60 kDa, Protein from Escherichia coli)
- Trnaphe (RNA from Escherichia coli)
- E. coli 70s ribosome complex 70s-etta_eq2-trnafmet-trnaphe (Sample)
- 70s ribosome (2 MDa, Complex from Escherichia coli)
- Trnafmet (RNA from Escherichia coli)
EttA-bound E. coli 70S ribosome complex containing P-site tRNA (raw map)
Chen B, Boel G, Hashem Y, Ning W, Fei J, Wang C, Gonzalez Jr RL, Hunt JF, Frank J
Nat Struct Mol Biol (2014) 21 pp. 152-159 [ DOI: doi:10.1038/nsmb.2741 Pubmed: 24389465 ]
- E. coli 70s ribosome complex 70s-etta_eq2-trnafmet (Sample)
- Trnafmet (RNA from Escherichia coli)
- 70s ribosome (2 MDa, Complex from Escherichia coli)
- Energy-dependent translational throttle a (etta) (60 kDa, Protein from Escherichia coli)