Cryo-EM structure of DNMDP-induced PDE3A-SLFN12 complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7eg1
Q-score: 0.549
Chen J, Liu N, Huang Y, Wang Y, Sun Y, Wu Q, Li D, Gao S, Wang HW, Huang N, Qi X, Wang X
Nat Commun (2021) 12 pp. 6204-6204 [ DOI: doi:10.1038/s41467-021-26546-8 Pubmed: 34707099 ]
- (4~{r})-3-[4-(diethylamino)-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]-4-methyl-4,5-dihydro-1~{h}-pyridazin-6-one (305 Da, Ligand)
- Slfn12 (Complex)
- Cgmp-inhibited 3',5'-cyclic phosphodiesterase a (49 kDa, Protein from Homo sapiens)
- Dimer of pde3a-slfn12 heterodimer (Complex from Homo sapiens)
- Schlafen family member 12 (65 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Pde3a (Complex from Homo sapiens)
Cryo-EM structure of anagrelide-induced PDE3A-SLFN12 complex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7eg0
Q-score: 0.487
Chen J, Liu N, Huang Y, Wang Y, Sun Y, Wu Q, Li D, Gao S, Wang HW, Huang N, Qi X, Wang X
Nat Commun (2021) 12 pp. 6204-6204 [ DOI: doi:10.1038/s41467-021-26546-8 Pubmed: 34707099 ]
- Slfn12 (Complex)
- Cgmp-inhibited 3',5'-cyclic phosphodiesterase a (49 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 6,7-bis(chloranyl)-3,5-dihydro-1h-imidazo[2,1-b]quinazolin-2-one (256 Da, Ligand)
- Pde3a (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Schlafen family member 12 (65 kDa, Protein from Homo sapiens)
- Dimer of pde3a-slfn12 heterodimer (Complex from Homo sapiens)
Cryo-EM structure of nauclefine-induced PDE3A-SLFN12 complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7eg4
Q-score: 0.532
Chen J, Liu N, Huang Y, Wang Y, Sun Y, Wu Q, Li D, Gao S, Wang HW, Huang N, Qi X, Wang X
Nat Commun (2021) 12 pp. 6204-6204 [ DOI: doi:10.1038/s41467-021-26546-8 Pubmed: 34707099 ]
- Slfn12 (Complex)
- Cgmp-inhibited 3',5'-cyclic phosphodiesterase a (49 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Parvine (287 Da, Ligand)
- Pde3a (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Schlafen family member 12 (65 kDa, Protein from Homo sapiens)
- Dimer of pde3a-slfn12 heterodimer (Complex from Homo sapiens)
cryoEM structure of the truncated HIV-1 Vif/CBFbeta/A3F complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6nil
Q-score: 0.383
Hu Y, Desimmie BA, Nguyen HC, Ziegler SJ, Cheng TC, Chen J, Wang J, Wang H, Zhang K, Pathak VK, Xiong Y
Nat Struct Mol Biol (2019) 26 pp. 1176-1183 [ DOI: doi:10.1038/s41594-019-0343-6 Pubmed: 31792451 ]
- Virion infectivity factor (16 kDa, Protein from Human immunodeficiency virus 1)
- Zinc ion (65 Da, Ligand)
- Dna dc->du-editing enzyme apobec-3f (24 kDa, Protein from Homo sapiens)
- 6xhis tagged ha3fctd-40aa-hcbfbeta fusion (Complex from Homo sapiens)
- Alpha domain truncated hiv-1 vif (Complex from Human immunodeficiency virus 1)
- Core-binding factor subunit beta (17 kDa, Protein from Homo sapiens)
- Truncated vif/cbfbeta/a3fctd complex (17 kDa, Complex from Human immunodeficiency virus 1)