Structure of RdrA-RdrB complex
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 8hr7
Q-score: 0.352
Gao Y, Luo X, Li P, Li Z, Ye F, Liu S, Gao P
Cell (2023) 186 pp. 999-1012.e20 [ DOI: doi:10.1016/j.cell.2023.01.026 Pubmed: 36764292 ]
- Rdra-rdrb complex (Complex from Escherichia coli)
- Archaeal atpase (107 kDa, Protein from Escherichia coli)
- Adenosine deaminase (92 kDa, Protein from Escherichia coli)
Structure of heptameric RdrA ring
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8hr8
Q-score: 0.499
Gao Y, Luo X, Li P, Li Z, Ye F, Liu S, Gao P
Cell (2023) 186 pp. 999-1012.e20 [ Pubmed: 36764292 DOI: doi:10.1016/j.cell.2023.01.026 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Archaeal atpase (107 kDa, Protein from Escherichia coli)
- Rdra (Complex from Escherichia coli)
Structure of tetradecameric RdrA ring
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 8hr9
Q-score: 0.472
Gao Y, Luo X, Li P, Li Z, Ye F, Liu S, Gao P
Cell (2023) 186 pp. 999-1012.e20 [ Pubmed: 36764292 DOI: doi:10.1016/j.cell.2023.01.026 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Archaeal atpase (107 kDa, Protein from Escherichia coli)
- Rdra (Complex from Escherichia coli)
Structure of heptameric RdrA ring in RNA-loading state
Resolution: 3.76 Å
EM Method: Single-particle
Fitted PDBs: 8hra
Q-score: 0.484
Gao Y, Luo X, Li P, Li Z, Ye F, Liu S, Gao P
Cell (2023) 186 pp. 999-1012.e20 [ Pubmed: 36764292 DOI: doi:10.1016/j.cell.2023.01.026 ]
- Rdra-rna complex (Complex from Escherichia coli)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Rna (5'-r(p*gp*up*cp*cp*ap*gp*cp*gp*up*cp*ap*up*cp*gp*cp*up*gp*gp*ap*c)-3') (6 kDa, RNA from Escherichia coli)
- Archaeal atpase (107 kDa, Protein from Escherichia coli)
Structure of tetradecameric RdrA ring in RNA-loading state
Resolution: 3.78 Å
EM Method: Single-particle
Fitted PDBs: 8hrb
Q-score: 0.44
Gao Y, Luo X, Li P, Li Z, Ye F, Liu S, Gao P
Cell (2023) 186 pp. 999-1012.e20 [ DOI: doi:10.1016/j.cell.2023.01.026 Pubmed: 36764292 ]
- Rdra-rna complex (Complex from Escherichia coli)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Archaeal atpase (107 kDa, Protein from Escherichia coli)
- Rna (5'-r(*gp*up*cp*cp*ap*gp*cp*gp*up*cp*ap*up*cp*gp*cp*up*gp*gp*ap*c)-3') (6 kDa, RNA from Escherichia coli)
Structure of dodecameric RdrB cage
Resolution: 2.58 Å
EM Method: Single-particle
Fitted PDBs: 8hrc
Q-score: 0.57
Gao Y, Luo X, Li P, Li Z, Ye F, Liu S, Gao P
Cell (2023) 186 pp. 999-1012.e20 [ Pubmed: 36764292 DOI: doi:10.1016/j.cell.2023.01.026 ]
- Adenosine deaminase (92 kDa, Protein from Escherichia coli)
- Rdrb (Complex from Escherichia coli)
EcoR124I-Ocr in the Intermediate State
Resolution: 4.37 Å
EM Method: Single-particle
Fitted PDBs: 7bst
Q-score: 0.245
Gao Y, Cao D, Zhu J, Feng H, Luo X, Liu S, Yan XX, Zhang X, Gao P
Nat Microbiol (2020) 5 pp. 1107-1118 [ Pubmed: 32483229 DOI: doi:10.1038/s41564-020-0731-z ]
- Type-1 restriction enzyme ecor124ii specificity protein (46 kDa, Protein from Escherichia coli)
- Ecor124i-ocr (Complex from Escherichia coli)
- Overcome classical restriction gp0.3 (13 kDa, Protein from Escherichia phage T7)
- Type i restriction enzyme ecor124ii m protein (58 kDa, Protein from Escherichia coli)
- Type i restriction enzyme r protein (120 kDa, Protein from Escherichia coli)