Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Resolution: 2.32 Å
EM Method: Single-particle
Fitted PDBs: 7vyv
Q-score: 0.684
Cai R, Ren Z, Zhao R, Wang X, Guo Z, Du R, Han W, Ru H, Gu J
To Be Published
- Tail spike protein depo32 (300 kDa, Complex from Klebsiella phage 020009)
- Depolymerase (98 kDa, Protein from Klebsiella phage GH-K3)
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Resolution: 2.46 Å
EM Method: Single-particle
Fitted PDBs: 7vz3
Q-score: -0.015
Cai R, Ren Z, Zhao R, Wang X, Guo Z, Du R, Han W, Ru H, Gu J
To Be Published
- Depolymerase (100 kDa, Protein from Klebsiella phage GH-K3)
- Tail spike protein depo32 (300 kDa, Complex from Klebsiella phage 020009)
E30 E-particle in complex with 6C5
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7cmk
Q-score: 0.467
Wang K, Zheng B, Zhang L, Cui L, Su X, Zhang Q, Guo Z, Guo Y, Zhang W, Zhu L, Zhu F, Rao Z, Wang X
Nat Commun (2020) 11 pp. 4419-4419 [ DOI: doi:10.1038/s41467-020-18250-w Pubmed: 32887892 ]
- Echovirus e30 in complex with 6c5 (Complex)
- E30 (Complex from Echovirus E30)
- Vp1 (33 kDa, Protein from Echovirus E30)
- 6c5-fab (Complex from Mus musculus)
- Light chain (23 kDa, Protein from Mouse)
- Vp2 (36 kDa, Protein from Echovirus E30)
- Vp3 (26 kDa, Protein from Echovirus E30)
- Heavy chain (23 kDa, Protein from Mouse)
E30 F-particle in complex with 4B10
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7c80
Q-score: 0.46
Wang K, Zheng B, Zhang L, Cui L, Su X, Zhang Q, Guo Z, Guo Y, Zhang W, Zhu L, Zhu F, Rao Z, Wang X
Nat Commun (2020) 11 pp. 4419-4419 [ DOI: doi:10.1038/s41467-020-18250-w Pubmed: 32887892 ]
- Vp4 (7 kDa, Protein from Echovirus E30)
- Light chain (24 kDa, Protein from Mouse)
- Vp3 (26 kDa, Protein from Echovirus E30)
- Vp1 (33 kDa, Protein from Echovirus E30)
- E30 f-particle in complex with 4b10 (Complex)
- E30 f-particle in complex with 4b10 (Complex from Echovirus E30)
- Sphingosine (299 Da, Ligand)
- Vp2 (28 kDa, Protein from Echovirus E30)
- Heavy chain (21 kDa, Protein from Mouse)
- E30 f-particle in complex with 4b10 (Complex from Mus musculus)
E30 F-particle in complex with 6C5
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7c81
Q-score: 0.517
Wang K, Zheng B, Zhang L, Cui L, Su X, Zhang Q, Guo Z, Guo Y, Zhang W, Zhu L, Zhu F, Rao Z, Wang X
Nat Commun (2020) 11 pp. 4419-4419 [ DOI: doi:10.1038/s41467-020-18250-w Pubmed: 32887892 ]
- Vp4 (7 kDa, Protein from Echovirus E30)
- Vp3 (26 kDa, Protein from Echovirus E30)
- E30 f-particle in complex with 6c5 (Complex from Echovirus E30)
- Vp1 (33 kDa, Protein from Echovirus E30)
- E30 f-particle in complex with 6c5 (Complex from Mus musculus)
- Light chain (23 kDa, Protein from Mouse)
- Sphingosine (299 Da, Ligand)
- Heavy chain (23 kDa, Protein from Mouse)
- Vp2 (28 kDa, Protein from Echovirus E30)
- E30 f-particle in complex with 6c5 (Complex)
Structure of a mechanotransduction ion channel Drosophila NOMPC in nanodisc
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 5vkq
Q-score: 0.378
Jin P, Bulkley D, Guo Y, Zhang W, Guo Z, Huynh W, Wu S, Meltzer S, Cheng T, Jan LY, Jan YN, Cheng Y
Nature (2017) 547 pp. 118-122 [ Pubmed: 28658211 DOI: doi:10.1038/nature22981 ]
- Tetrameric channel (754 kDa, Complex from Drosophila melanogaster)
- No mechanoreceptor potential c isoform l (188 kDa, Protein from Drosophila melanogaster)
- 1,2-diacyl-sn-glycero-3-phoshocholine (734 Da, Ligand)