Electron Microscopy Data Bank

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Structure of an archaeal ABCE1-bound ribosomal post-splitting complex

Release date: Feb. 12, 2020
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6tmf
Q-score: 0.583

Nurenberg-Goloub E, Kratzat H, Heinemann H, Heuer A, Kotter P, Berninghausen O, Becker T, Tampe R, Beckmann R

EMBO J (2020) 39 pp. e103788-e103788 [ Pubmed: 32064661 DOI: doi:10.15252/embj.2019103788 ]

Sample:

30s ribosomal protein s12 (16 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s3 (21 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s17 (12 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s17e (7 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s abce1 post-splitting complex (Complex)
30s ribosomal protein s4 (20 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s11 (14 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s7 (24 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s5 (24 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s28e (7 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
Magnesium ion (24 Da, Ligand)
30s ribosomal protein s9 (14 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s3ae (21 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
Atpase (67 kDa, Protein from Saccharolobus solfataricus)
Iron/sulfur cluster (351 Da, Ligand)
30s ribosomal protein s8 (14 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s19e (17 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
Rna-binding protein (6 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s2 (22 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
16s ribosomal rna (482 kDa, RNA from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s13 (15 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s10 (11 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s6e (13 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s19p (13 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s27e (6 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
50s ribosomal protein l7ae (13 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s15 (17 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s14 type z (6 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
Lsu ribosomal protein l41e (5 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s8e (14 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
Abce1 (Complex from Saccharolobus solfataricus)
30s ribosomal protein s24e (11 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
30s ribosomal protein s4e (27 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s ribosomal protein s27ae (5 kDa, Protein from Thermococcus celer Vu 13 = JCM 8558)
30s small ribosomal subunit (Complex from Thermococcus celer Vu 13 = JCM 8558)

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