Electron Microscopy Data Bank

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Release date: Oct. 20, 2021
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 7eel
Q-score: 0.457

Zhang JT, Yang F, Du K, Li WF, Chen Y, Jiang YL, Li Q, Zhou CZ

Structure (2022) 30 pp. 240-251.e4 [ Pubmed: 34727518 DOI: doi:10.1016/j.str.2021.10.004 ]

Sample:

Cement (decoration) proteins (13 kDa, Protein from unidentified)
Major capsid proteins (39 kDa, Protein from unidentified)
Unidentified (Virus from unidentified)

EMD-31079

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Cyanophage Pam1 portal-adaptor complex

Release date: Oct. 20, 2021
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 7eep
Q-score: 0.496

Zhang JT, Yang F, Du K, Li WF, Chen Y, Jiang YL, Li Q, Zhou CZ

Structure (2022) 30 pp. 240-251.e4 [ Pubmed: 34727518 DOI: doi:10.1016/j.str.2021.10.004 ]

Sample:

Pam1 portal proteins (67 kDa, Protein from unidentified)
Unidentified (Virus from unidentified)
Pam1 adaptor proteins (19 kDa, Protein from unidentified)

EMD-31080

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Cyanophage Pam1 tail machine

Release date: Oct. 20, 2021
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 7eeq
Q-score: 0.461

Zhang JT, Yang F, Du K, Li WF, Chen Y, Jiang YL, Li Q, Zhou CZ

Structure (2022) 30 pp. 240-251.e4 [ Pubmed: 34727518 DOI: doi:10.1016/j.str.2021.10.004 ]

Sample:

Needle head proteins (48 kDa, Protein from unidentified)
Pam1 (Complex from unidentified)
Tailspike head-binding domain (10 kDa, Protein from unidentified)

EMD-31431

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Cyanophage A-1(L) capsid asymmetric unit

Release date: Sept. 29, 2021
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 7f38
Q-score: 0.523

Cui N, Yang F, Zhang JT, Sun H, Chen Y, Yu RC, Chen ZP, Jiang YL, Han SJ, Xu X, Li Q, Zhou CZ

J Virol (2021) 95 pp. e0135621-e0135621 [ DOI: doi:10.1128/JVI.01356-21 Pubmed: 34549983 ]

Sample:

Nostoc phage a1 (Virus from Nostoc phage A1)
Putative major capsid protein (39 kDa, Protein from Nostoc phage A1)

EMD-31583

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Apo form of human bile salts export pump ABCB11

Release date: Aug. 11, 2021
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6lr0
Q-score: 0.419

Wang L, Hou WT, Chen L, Jiang YL, Xu D, Sun L, Zhou CZ, Chen Y

Cell Res (2020) 30 pp. 623-625 [ DOI: doi:10.1038/s41422-020-0302-0 Pubmed: 32203132 ]

Sample:

Abcb11 (Cellular component from Homo sapiens)
Bile salts export pump (Protein)

EMD-30498

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Cryo-EM structure of sodium-dependent bicarbonate transporter SbtA from Synechocystis sp. PCC 6803

Release date: June 23, 2021
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 7cye
Q-score: 0.446

Liu XY, Hou WT, Wang L, Li B, Chen Y, Chen Y, Jiang YL, Zhou CZ

Cell Discov (2021) 7 pp. 63-63 [ DOI: doi:10.1038/s41421-021-00287-w Pubmed: 34373447 ]

Sample:

Bicarbonate transporter sbta (120 kDa, Cellular component from Synechocystis sp. PCC 6803 substr. Kazusa)
Slr1512 protein (39 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)

EMD-30499

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Cryo-EM structure of bicarbonate transporter SbtA in complex with PII-like signaling protein SbtB from Synechocystis sp. PCC 6803

Release date: June 23, 2021
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 7cyf
Q-score: 0.544

Liu XY, Hou WT, Wang L, Li B, Chen Y, Chen Y, Jiang YL, Zhou CZ

Cell Discov (2021) 7 pp. 63-63 [ DOI: doi:10.1038/s41421-021-00287-w Pubmed: 34373447 ]

Sample:

Slr1512 protein (39 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
Adenosine monophosphate (347 Da, Ligand)
Sodium ion (22 Da, Ligand)
Membrane-associated protein slr1513 (12 kDa, Protein from Synechocystis sp. PCC 6803 substr. Kazusa)
Sbta-sbtb complex (150 kDa, Complex from Synechocystis sp. PCC 6803 substr. Kazusa)

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