Structure of baseplate with receptor binding complex of Agrobacterium phage Milano
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8fqc
Q-score: 0.498
Sonani RR, Palmer LK, Esteves NC, Horton AA, Sebastian AL, Kelly RJ, Wang F, Kreutzberger MAB, Russell WK, Leiman PG, Scharf BE, Egelman EH
Nat Commun (2024) 15 pp. 756-756 [ Pubmed: 38272938 DOI: doi:10.1038/s41467-024-44959-z ]
- Tail spike protein, gp124 (61 kDa, Protein from Agrobacterium phage Milano)
- Baseplate wedge 1, gp28 (19 kDa, Protein from Agrobacterium phage Milano)
- Short tail fibers, gp31 (31 kDa, Protein from Agrobacterium phage Milano)
- Baseplate wedge 2 protein, gp29 (43 kDa, Protein from Agrobacterium phage Milano)
- Baseplate hub protein, gp26 (49 kDa, Protein from Agrobacterium phage Milano)
- Tail-tube, gp21 (14 kDa, Protein from Agrobacterium phage Milano)
- Agrobacterium phage milano (Virus from Agrobacterium phage Milano)
- Tail sheath protein, gp20 (53 kDa, Protein from Agrobacterium phage Milano)
- Baseplate central spike, gp27 (20 kDa, Protein from Agrobacterium phage Milano)
- Baseplate wedge 3 protein, gp30 (31 kDa, Protein from Agrobacterium phage Milano)
- Fe (iii) ion (55 Da, Ligand)
- Baseplate centerpiece, gp25 (43 kDa, Protein from Agrobacterium phage Milano)
Portal assembly of Agrobacterium phage Milano
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8fwb
Q-score: 0.496
Sonani RR, Esteves NC, Horton AA, Kelly RJ, Sebastian AL, Wang F, Kreutzberger MAB, Leiman PG, Scharf BE, Egelman EH
Commun Biol (2023) 6 pp. 921-921 [ DOI: doi:10.1038/s42003-023-05292-1 Pubmed: 37684529 ]
Neck structure of Agrobacterium phage Milano, C3 symmetry
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 8fwe
Q-score: 0.475
Sonani RR, Esteves NC, Horton AA, Kelly RJ, Sebastian AL, Wang F, Kreutzberger MAB, Leiman PG, Scharf BE, Egelman EH
Commun Biol (2023) 6 pp. 921-921 [ DOI: doi:10.1038/s42003-023-05292-1 Pubmed: 37684529 ]
- Tail-terminator protein, gp18 (20 kDa, Protein from Agrobacterium phage Milano)
- Tail-tube, gp21 (14 kDa, Protein from Agrobacterium phage Milano)
- Agrobacterium phage milano (Virus from Agrobacterium phage Milano)
- Portal protein, gp7 (45 kDa, Protein from Agrobacterium phage Milano)
- Neck 2 protein, gp15 (16 kDa, Protein from Agrobacterium phage Milano)
- Collar sheath protein, gp13 (24 kDa, Protein from Agrobacterium phage Milano)
- Neck 1 protein, gp14 (22 kDa, Protein from Agrobacterium phage Milano)
Structure of neck with portal vertex of capsid of Agrobacterium phage Milano
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 8fxr
Q-score: 0.302
Sonani RR, Esteves NC, Horton AA, Kelly RJ, Sebastian AL, Wang F, Kreutzberger MAB, Leiman PG, Scharf BE, Egelman EH
Commun Biol (2023) 6 pp. 921-921 [ Pubmed: 37684529 DOI: doi:10.1038/s42003-023-05292-1 ]
- Linking protein 1, gp16 (22 kDa, Protein from Agrobacterium phage Milano)
- Tail-tube, gp21 (14 kDa, Protein from Agrobacterium phage Milano)
- Agrobacterium phage milano (Virus from Agrobacterium phage Milano)
- Neck 1 protein, gp14 (22 kDa, Protein from Agrobacterium phage Milano)
- Neck 2 protein, gp15 (16 kDa, Protein from Agrobacterium phage Milano)
- Portal protein, gp7 (45 kDa, Protein from Agrobacterium phage Milano)
- Linking protein 2, gp128 (3 kDa, Protein from Agrobacterium phage Milano)
- Tail-terminator protein, gp18 (20 kDa, Protein from Agrobacterium phage Milano)
- Collar sheath protein, gp13 (24 kDa, Protein from Agrobacterium phage Milano)
- Major capsid protein, gp9 (52 kDa, Protein from Agrobacterium phage Milano)
- Minor capsid protein, gp10 (14 kDa, Protein from Agrobacterium phage Milano)
Structure of the Saccharolobus solfataricus archaeal type IV pilus at 3 Angstrom resolution
Resolution: 3.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 8fjs
Q-score: 0.573
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ DOI: doi:10.1073/pnas.2304256120 Pubmed: 37399404 ]
Asymmetric cryo-EM structure of a curved Saccharolobus solfataricus type IV pilus
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8fk0
Q-score: 0.449
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ Pubmed: 37399404 DOI: doi:10.1073/pnas.2304256120 ]
Structure of the Pyrobaculum calidifontis flagellar-like archaeal type IV pilus
Resolution: 4.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 8fk7
Q-score: 0.411
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ Pubmed: 37399404 DOI: doi:10.1073/pnas.2304256120 ]
- Flagellin (14 kDa, Protein from Pyrobaculum calidifontis)
- Archaeal type iv pilus (Complex from Pyrobaculum calidifontis)
Cryo-EM structure of the wild type P. aeruginosa flagellar filament
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8sug
Q-score: 0.26
Nedeljkovic M, Kreutzberger MAB, Postel S, Bonsor D, Xing Y, Jacob N, Schuler WJ, Egelman EH, Sundberg EJ
PLoS Pathog (2023) 19 pp. e1010979-e1010979 [ DOI: doi:10.1371/journal.ppat.1010979 Pubmed: 37253071 ]
Cryo-EM structure of conjugation pili from Aeropyrum pernix
Resolution: 3.44 Å
EM Method: Helical reconstruction
Fitted PDBs: 8dfu
Q-score: 0.508
Beltran LC, Cvirkaite-Krupovic V, Miller J, Wang F, Kreutzberger MAB, Patkowski JB, Costa TRD, Schouten S, Levental I, Conticello VP, Egelman EH, Krupovic M
Nat Commun (2023) 14 pp. 666-666 [ Pubmed: 36750723 DOI: doi:10.1038/s41467-023-36349-8 ]
Cryo-EM structure of the supercoiled EPEC H6 flagellar filament core Curly I waveform
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8cvi
Q-score: 0.486
Kreutzberger MAB, Sonani RR, Liu J, Chatterjee S, Wang F, Sebastian AL, Biswas P, Ewing C, Zheng W, Poly F, Frankel G, Luisi BF, Calladine CR, Krupovic M, Scharf BE, Egelman EH
Cell (2022) 185 pp. 3487-3500.e14 [ Pubmed: 36057255 DOI: doi:10.1016/j.cell.2022.08.009 ]
- Bacterial flagellar filament core (Complex from Escherichia coli)
- Flagellin (56 kDa, Protein from Escherichia coli)