Large subunit of the Chlamydomonas reinhardtii mitoribosome
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7pkt
Q-score: 0.486
Waltz F, Salinas-Giege T, Englmeier R, Meichel H, Soufari H, Kuhn L, Pfeffer S, Forster F, Engel BD, Giege P, Drouard L, Hashem Y
Nat Commun (2021) 12 pp. 7176-7176 [ DOI: doi:10.1038/s41467-021-27200-z Pubmed: 34887394 ]
- 50s ribosomal protein l9, chloroplastic (30 kDa, Protein from Chlamydomonas reinhardtii)
- Ml115 (72 kDa, Protein from Chlamydomonas reinhardtii)
- Ul14m (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_l16 domain-containing protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Ul5m (23 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Chlamydomonas reinhardtii)
- Ml116 (53 kDa, Protein from Chlamydomonas reinhardtii)
- L7 rrna (186 kDa, RNA from Chlamydomonas reinhardtii)
- Ml113 (84 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_tl5_c domain-containing protein (38 kDa, Protein from Chlamydomonas reinhardtii)
- Ul4m (45 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Bl21m (40 kDa, Protein from Chlamydomonas reinhardtii)
- L3b rrna (59 kDa, RNA from Chlamydomonas reinhardtii)
- L5 rrna (47 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l30 domain-containing protein (24 kDa, Protein from Chlamydomonas reinhardtii)
- L1 rrna (51 kDa, RNA from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Ul29m (14 kDa, Protein from Chlamydomonas reinhardtii)
- Ul3m (44 kDa, Protein from Chlamydomonas reinhardtii)
- Bl32m (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml119 (36 kDa, Protein from Chlamydomonas reinhardtii)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Large subunit of the mitochondrial ribosome of chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- Ml114 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Ml59/64 (14 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l33 (6 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l23 (25 kDa, Protein from Chlamydomonas reinhardtii)
- Plastid ribosomal protein l6 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Ml63/57/60 (14 kDa, Protein from Chlamydomonas reinhardtii)
- 50s ribosomal protein l20 (13 kDa, Protein from Chlamydomonas reinhardtii)
- Unk1 (2 kDa, Protein from Chlamydomonas reinhardtii)
- Unk2 (4 kDa, Protein from Chlamydomonas reinhardtii)
- L4 rrna (38 kDa, RNA from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- Bl36m (3 kDa, Protein from Chlamydomonas reinhardtii)
- Ml41 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l13 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Bl35m (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ml40 (17 kDa, Protein from Chlamydomonas reinhardtii)
- Bl34m (29 kDa, Protein from Chlamydomonas reinhardtii)
- Ml80 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17,bl17m (21 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_l2_c domain-containing protein (41 kDa, Protein from Chlamydomonas reinhardtii)
- Ml87 (23 kDa, Protein from Chlamydomonas reinhardtii)
- Ml118 (64 kDa, Protein from Chlamydomonas reinhardtii)
- Ppr* (14 kDa, Protein from Chlamydomonas reinhardtii)
- L2a rrna (27 kDa, RNA from Chlamydomonas reinhardtii)
- L6 rrna (43 kDa, RNA from Chlamydomonas reinhardtii)
- Kow domain-containing protein,ul24m (31 kDa, Protein from Chlamydomonas reinhardtii)
- Ml43 (16 kDa, Protein from Chlamydomonas reinhardtii)
- Bl27m (18 kDa, Protein from Chlamydomonas reinhardtii)
- L3a rrna (5s) (24 kDa, RNA from Chlamydomonas reinhardtii)
- L8 rrna (132 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l18e/l15p domain-containing protein (35 kDa, Protein from Chlamydomonas reinhardtii)
- Ml117 (75 kDa, Protein from Chlamydomonas reinhardtii)
- Bl28m (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ul22m (39 kDa, Protein from Chlamydomonas reinhardtii)
Leishmania Major mitochondrial ribosome
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ane
Q-score: 0.321
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ul24m (53 kDa, Protein from Leishmania major)
- Ms37 (24 kDa, Protein from Leishmania major)
- Bl19m (16 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Ms26 (49 kDa, Protein from Leishmania major)
- Akap7_nls domain-containing protein (31 kDa, Protein from Leishmania major)
- Ms52 (75 kDa, Protein from Leishmania major)
- Us14m (19 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Ml100 (146 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- Ms55 (65 kDa, Protein from Leishmania major)
- Bl20m (22 kDa, Protein from Leishmania major)
- Ms34 (29 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- Ms48 (199 kDa, Protein from Leishmania major)
- Ubiquitin-like domain-containing protein (27 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (18 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
- Leishmania major mitochondrial riobosome (Complex from Leishmania major)
- Ms29 (54 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ms58 (36 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Ml38 (57 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Protein fyv4, mitochondrial (22 kDa, Protein from Leishmania major)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Bl21m (20 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Ms49 (133 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Ms73 (11 kDa, Protein from Leishmania major)
- Ms57 (45 kDa, Protein from Leishmania major)
- Ml52 (29 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Bs18m (37 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Ms53 (72 kDa, Protein from Leishmania major)
- Us3m (10 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Us11m (40 kDa, Protein from Leishmania major)
- Large ribosomal rna (6 MDa, RNA from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Rhodanese domain-containing protein (30 kDa, Protein from Leishmania major)
- Ms60 (35 kDa, Protein from Leishmania major)
- Ms69 (16 kDa, Protein from Leishmania major)
- Ms43 (51 kDa, Protein from Leishmania major)
- Us8m (35 kDa, Protein from Leishmania major)
- Bs6m (18 kDa, Protein from Leishmania major)
- Ms35 (99 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Ms59 (35 kDa, Protein from Leishmania major)
- Us9m (39 kDa, Protein from Leishmania major)
- Putative superoxide dismutase (30 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Ms23 (36 kDa, Protein from Leishmania major)
- Ml59/64 (28 kDa, Protein from Leishmania major)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Bs16m (22 kDa, Protein from Leishmania major)
- Magnesium ion (24 Da, Ligand)
- Ms61 (33 kDa, Protein from Leishmania major)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (53 kDa, Protein from Leishmania major)
- Ms70 (21 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Ms63 (33 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ms50 (139 kDa, Protein from Leishmania major)
- Ms33 (20 kDa, Protein from Leishmania major)
- Ms72 (19 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Ul4m (49 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Ml98 (13 kDa, Protein from Leishmania major)
- Ms71 (19 kDa, Protein from Leishmania major)
- Excreted/secreted protein 15 (92 kDa, Protein from Leishmania major)
- Ms22 (73 kDa, Protein from Leishmania major)
- Ms47 (131 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Ms65 (30 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Us10m (92 kDa, Protein from Leishmania major)
- Ms66 (44 kDa, Protein from Leishmania major)
- 30s ribosomal protein s17-like protein (36 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Ms56 (43 kDa, Protein from Leishmania major)
- Ms62 (27 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Bs21m (22 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- Us15m (50 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Us19m (19 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ms51 (94 kDa, Protein from Leishmania major)
The Large subunit of the Kinetoplastid mitochondrial ribosome
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7aih
Q-score: 0.479
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ml49 (26 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Ml52,ml52 (29 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Bl20 (22 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (19 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Bl21m (21 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ul4m (50 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Ml54/69 (28 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- Ml99 (13 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Ml100 (146 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Ml38 (58 kDa, Protein from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ribosomal rna (2 MDa, RNA from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Ml73 (36 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Bl19m (16 kDa, Protein from Leishmania major)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
Intermediate assembly of the Large subunit from Leishmania major mitochondrial ribosome
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7am2
Q-score: 0.469
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ml76 (38 kDa, Protein from Leishmania tarentolae)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania tarentolae)
- Ml75 (39 kDa, Protein from Leishmania tarentolae)
- Ml42 (22 kDa, Protein from Leishmania tarentolae)
- Ml68 (65 kDa, Protein from Leishmania tarentolae)
- Ua (14 kDa, Protein from Leishmania tarentolae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ml72 (56 kDa, Protein from Leishmania tarentolae)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania tarentolae)
- Ml78 (33 kDa, Protein from Leishmania tarentolae)
- Bl20m (22 kDa, Protein from Leishmania tarentolae)
- Ul23m (28 kDa, Protein from Leishmania tarentolae)
- Ml53 (35 kDa, Protein from Leishmania tarentolae)
- Ml89 (21 kDa, Protein from Leishmania tarentolae)
- Ml84 (24 kDa, Protein from Leishmania tarentolae)
- Bl28m (27 kDa, Protein from Leishmania tarentolae)
- U1 (3 kDa, Protein from Leishmania tarentolae)
- Bl35m (18 kDa, Protein from Leishmania tarentolae)
- Ml86 (21 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania tarentolae)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania tarentolae)
- R1 (896 Da, RNA from Leishmania tarentolae)
- Ml88 (22 kDa, Protein from Leishmania tarentolae)
- Bl21m (21 kDa, Protein from Leishmania tarentolae)
- Ml49 (26 kDa, Protein from Leishmania tarentolae)
- Ml74 (39 kDa, Protein from Leishmania tarentolae)
- Ml87 (22 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania tarentolae)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania tarentolae)
- Ml41 (22 kDa, Protein from Leishmania tarentolae)
- Ml80 (27 kDa, Protein from Leishmania tarentolae)
- Ml94 (17 kDa, Protein from Leishmania tarentolae)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- G domain-containing protein (86 kDa, Protein from Leishmania tarentolae)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania tarentolae)
- Ml71 (49 kDa, Protein from Leishmania tarentolae)
- Ml67 (97 kDa, Protein from Leishmania tarentolae)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania tarentolae)
- U4 (9 kDa, Protein from Leishmania tarentolae)
- Rna uridylyltransferase (23 kDa, Protein from Leishmania tarentolae)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania tarentolae)
- Ul22m (32 kDa, Protein from Leishmania tarentolae)
- Ml63 (18 kDa, Protein from Leishmania tarentolae)
- Ml98 (13 kDa, Protein from Leishmania tarentolae)
- R5 (1 kDa, RNA from Leishmania tarentolae)
- Ul30m (45 kDa, Protein from Leishmania tarentolae)
- Ul29m (54 kDa, Protein from Leishmania tarentolae)
- U5 (6 kDa, Protein from Leishmania tarentolae)
- Ml70 (50 kDa, Protein from Leishmania tarentolae)
- Ml52,ml52 (29 kDa, Protein from Leishmania tarentolae)
- U6 (13 kDa, Protein from Leishmania tarentolae)
- Bl19m (16 kDa, Protein from Leishmania tarentolae)
- Ml99 (13 kDa, Protein from Leishmania tarentolae)
- Gtpase der (56 kDa, Protein from Leishmania tarentolae)
- Dead/deah box helicase-like protein (87 kDa, Protein from Leishmania tarentolae)
- Ml100 (146 kDa, Protein from Leishmania tarentolae)
- Ribosomal rna (6 MDa, RNA from Leishmania tarentolae)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania tarentolae)
- Ul4m (50 kDa, Protein from Leishmania tarentolae)
- Ml59/64 (28 kDa, Protein from Leishmania tarentolae)
- U8 (4 kDa, Protein from Leishmania tarentolae)
- Pseudouridylate synthase-like protein (47 kDa, Protein from Leishmania tarentolae)
- Spou_methylase domain-containing protein (63 kDa, Protein from Leishmania tarentolae)
- Ml81 (37 kDa, Protein from Leishmania tarentolae)
- G domain-containing protein (51 kDa, Protein from Leishmania tarentolae)
- U3 (5 kDa, Protein from Leishmania tarentolae)
- Ml85 (27 kDa, Protein from Leishmania tarentolae)
- R2 (10 kDa, RNA from Leishmania tarentolae)
- Acyl carrier protein (16 kDa, Protein from Leishmania tarentolae)
- Ml78 (3 kDa, Protein from Leishmania tarentolae)
- Ml95 (18 kDa, Protein from Leishmania tarentolae)
- Ul24m (53 kDa, Protein from Leishmania tarentolae)
- Bl32m (9 kDa, Protein from Leishmania tarentolae)
- Trud domain-containing protein (68 kDa, Protein from Leishmania tarentolae)
- Dnaj-like protein (45 kDa, Protein from Leishmania tarentolae)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania tarentolae)
- U2 (2 kDa, Protein from Leishmania tarentolae)
- Ml93 (18 kDa, Protein from Leishmania tarentolae)
- L0r8f8 (14 kDa, Protein from Leishmania tarentolae)
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7aor
Q-score: 0.416
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Us14m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms55 (67 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs16m (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms63 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-if3 (42 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms65 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi)
- Us10m (94 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms33 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms73 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Akap7_nls domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us11m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Protein fyv4, mitochondrial (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms48 (206 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Trafficking protein particle complex subunit (28 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms22 (73 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms69 (21 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi (strain CL Brener))
- Ms52 (81 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms61 (32 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms47 (134 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Rhodanese domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us9m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms66 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms37 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms57 (46 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs18m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms38 (26 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us19 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Zinc ion (65 Da, Ligand)
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex)
- Ms60 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms62 (31 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms58 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms53 (76 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms72 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms56 (47 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms26 (51 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Rna (478-mer) (2 MDa, RNA from Trypanosoma cruzi (strain CL Brener))
- Ribosome protein s12 (9 kDa, Protein from Trypanosoma cruzi)
- Ms29 (57 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms50 (129 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms35 (99 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Magnesium ion (24 Da, Ligand)
- Uridine 5'-triphosphate (484 Da, Ligand)
- 30s ribosomal protein s17-like protein (35 kDa, Protein from Trypanosoma cruzi)
- Ms54 (77 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms51 (95 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us8m (33 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Superoxide dismutase, putative (38 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms68 (27 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms71 (25 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms59 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs6m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms49 (136 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms23 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Murf5 (10 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us15m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Sod_fe_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs21m (23 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms70 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
Plant mitochondrial respiratory complex I
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7a23
Q-score: 0.338
Soufari H, Parrot C, Kuhn L, Waltz F, Hashem Y
Nat Commun (2020) 11 pp. 5195-5195 [ DOI: doi:10.1038/s41467-020-18814-w Pubmed: 33060577 ]
- Acpm2 (14 kDa, Protein from Wild cabbage)
- Ca1 (30 kDa, Protein from Wild cabbage)
- B13 (19 kDa, Protein from Wild cabbage)
- P1 (11 kDa, Protein from Wild cabbage)
- 75kda (81 kDa, Protein from Wild cabbage)
- 13kda (12 kDa, Protein from Wild cabbage)
- Nad6m (23 kDa, Protein from Wild cabbage)
- B14 (15 kDa, Protein from Wild cabbage)
- Nad4lm (11 kDa, Protein from Wild cabbage)
- B15 (8 kDa, Protein from Wild cabbage)
- Nad9m (22 kDa, Protein from Wild cabbage)
- 20.9kda (11 kDa, Protein from Wild cabbage)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Nad2m (55 kDa, Protein from Wild cabbage)
- Flavin mononucleotide (456 Da, Ligand)
- P2 (11 kDa, Protein from Wild cabbage)
- B8 (10 kDa, Protein from Wild cabbage)
- Cal1 (27 kDa, Protein from Wild cabbage)
- Nad5m (74 kDa, Protein from Wild cabbage)
- 39kda (43 kDa, Protein from Wild cabbage)
- 24kda (28 kDa, Protein from Wild cabbage)
- B14.5b (9 kDa, Protein from Wild cabbage)
- Mwfe (7 kDa, Protein from Wild cabbage)
- Nad4m (55 kDa, Protein from Wild cabbage)
- Nad3m (13 kDa, Protein from Wild cabbage)
- B22 (13 kDa, Protein from Wild cabbage)
- Tyky (25 kDa, Protein from Wild cabbage)
- B18 (11 kDa, Protein from Wild cabbage)
- Psst (24 kDa, Protein from Wild cabbage)
- 15kda (9 kDa, Protein from Wild cabbage)
- Unk1 (1 kDa, Protein from Wild cabbage)
- Mitochondrial respiratory complex i (Complex from Brassica oleracea)
- B12-1 (8 kDa, Protein from Wild cabbage)
- Phosphatidylinositol (887 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Nad1m (36 kDa, Protein from Wild cabbage)
- Unk2 (1 kDa, Protein from Wild cabbage)
- Bicarbonate ion (61 Da, Ligand)
- Pdsw (12 kDa, Protein from Wild cabbage)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Esss (12 kDa, Protein from Wild cabbage)
- Cardiolipin (1 kDa, Ligand)
- 51kda (53 kDa, Protein from Wild cabbage)
- B9 (6 kDa, Protein from Wild cabbage)
- 18kda (17 kDa, Protein from Wild cabbage)
- Aggg (7 kDa, Protein from Wild cabbage)
- (1s)-2-{[(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (720 Da, Ligand)
- B14.5a (15 kDa, Protein from Wild cabbage)
- Iron/sulfur cluster (351 Da, Ligand)
- Nad7m (45 kDa, Protein from Wild cabbage)
- Acpm1 (13 kDa, Protein from Wild cabbage)
- Pgiv (11 kDa, Protein from Wild cabbage)
- B17.2 (18 kDa, Protein from Wild cabbage)
- B16.6 (16 kDa, Protein from Wild cabbage)
Assembly intermediate of the plant mitochondrial complex I
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7a24
Q-score: 0.207
Soufari H, Parrot C, Kuhn L, Waltz F, Hashem Y
Nat Commun (2020) 11 pp. 5195-5195 [ DOI: doi:10.1038/s41467-020-18814-w Pubmed: 33060577 ]
- Nad6m (23 kDa, Protein from Brassica oleracea)
- 39kda (43 kDa, Protein from Brassica oleracea)
- B14 (15 kDa, Protein from Brassica oleracea)
- Cardiolipin (1 kDa, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Tyky (25 kDa, Protein from Brassica oleracea)
- 75kda (81 kDa, Protein from Brassica oleracea)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- 24kda (28 kDa, Protein from Brassica oleracea)
- B16.6 (16 kDa, Protein from Brassica oleracea)
- Cal1 (27 kDa, Protein from Brassica oleracea)
- Mwfe (7 kDa, Protein from Brassica oleracea)
- Nad4lm (11 kDa, Protein from Brassica oleracea)
- Pgiv (11 kDa, Protein from Brassica oleracea)
- Phosphatidylinositol (887 Da, Ligand)
- 13kda (12 kDa, Protein from Brassica oleracea)
- Nad2m (55 kDa, Protein from Brassica oleracea)
- Flavin mononucleotide (456 Da, Ligand)
- Unk1 (1 kDa, Protein from Brassica oleracea)
- Iron/sulfur cluster (351 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Gldh (68 kDa, Protein from Brassica oleracea)
- (1s)-2-{[(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (720 Da, Ligand)
- Nad7m (45 kDa, Protein from Brassica oleracea)
- 51kda (53 kDa, Protein from Brassica oleracea)
- B13 (19 kDa, Protein from Brassica oleracea)
- B17.2 (18 kDa, Protein from Brassica oleracea)
- Acpm1 (13 kDa, Protein from Brassica oleracea)
- P2 (11 kDa, Protein from Brassica oleracea)
- Nad1m (36 kDa, Protein from Brassica oleracea)
- Plant mitochondrial respiratory complex i assembly intermediate in presence of gldh (Complex from Brassica oleracea)
- 18kda (17 kDa, Protein from Brassica oleracea)
- Mnll (11 kDa, Protein from Brassica oleracea)
- Nad9m (22 kDa, Protein from Brassica oleracea)
- Psst (24 kDa, Protein from Brassica oleracea)
- B8 (10 kDa, Protein from Brassica oleracea)
- B14.5b (9 kDa, Protein from Brassica oleracea)
- 15kda (9 kDa, Protein from Brassica oleracea)
- B14.5a (15 kDa, Protein from Brassica oleracea)
- Nad3m (13 kDa, Protein from Brassica oleracea)
- B9 (6 kDa, Protein from Brassica oleracea)
- Bicarbonate ion (61 Da, Ligand)
- Ca1 (30 kDa, Protein from Brassica oleracea)