EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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primary_citation_author:"Lan J" AND assembly_molecular_weight:{100000 TO 250000] AND xref_links:"interpro" AND microscope_name:"FEI TITAN KRIOS"

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EMD-31434

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SARS-CoV-2 RBD in complex with A5-10 Fab and A34-2 Fab

Release date: June 22, 2022
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7f3q
Q-score: 0.482

Dou Y, Xu K, Deng YQ, Jia Z, Lan J, Xu X, Zhang G, Cao T, Liu P, Wang X, Wang X, Xu L, Du P, Qin CF, Liu H, Li Y, Wu G, Wang K, Lu B

Antib Ther (2023) 6 pp. 76-86 [ Pubmed: 37077472 DOI: doi:10.1093/abt/tbad002 ]

Sample:

2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Heavy chain of a34-2 fab (23 kDa, Protein from Homo sapiens)
Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Sars-cov-2 s protein rbd in complex with two fabs (Complex)
Light chain of a5-10 fab (22 kDa, Protein from Homo sapiens)
Fab (Complex from Homo sapiens)
Sars-cov-2 s protein rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
Light chain of a34-2 fab (22 kDa, Protein from Homo sapiens)
Heavy chain of a5-10 fab (24 kDa, Protein from Homo sapiens)
2-(n-morpholino)-ethanesulfonic acid (195 Da, Ligand)

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EMD-30816

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Cryo-EM structure of SARS-CoV2 RBD-ACE2 complex

Release date: Dec. 29, 2021
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7dqa
Q-score: 0.508

Liu N, Zheng LM, Xu J, Wang J, Hu CX, Lan J, Zhang X, Zhang JC, Xu K, Cheng H, Yang Z, Gao X, Wang XQ, Peng HL, Chen YN, Wang HW

Biophys Rep (2022) 7 pp. 227-238 [ DOI: doi:10.52601/bpr.2021.210007 ]

Sample:

Cryo-em structure of sars-cov2 rbd-ace2 complex (95 kDa, Complex from Homo sapiens)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
Chloride ion (35 Da, Ligand)
Water (18 Da, Ligand)
Spike glycoprotein (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Zinc ion (65 Da, Ligand)
Sars-cov2 rbd (Complex)
Angiotensin-converting enzyme 2 (92 kDa, Protein from Homo sapiens)

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EMDB [2]

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