Electron Microscopy Data Bank

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Combined linker domain of N-DRC and associated proteins Tetrahymena

Release date: Sept. 27, 2023
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8tid
Q-score: 0.072

Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, Legal T, Papoulas O, Janowska M, Valente-Paterno M, Marcotte EM, Wloga D, Bui KH

Nat Commun (2023) 14 pp. 5741-5741 [ Pubmed: 37714832 DOI: doi:10.1038/s41467-023-41480-7 ]

Sample:

Growth-arrest-specific microtubule-binding protein (55 kDa, Protein from Tetrahymena thermophila)
Flagellar associated protein (42 kDa, Protein from Tetrahymena thermophila)
Combined linker domain of n-drc and associated proteins tetrahymena (Cell from Tetrahymena thermophila)
Dynein regulatory complex protein 9 (44 kDa, Protein from Tetrahymena thermophila)
Lrrc48 protein (68 kDa, Protein from Tetrahymena thermophila)
L-shape (unknown-protein) (50 kDa, Protein from Tetrahymena thermophila)
Kinase domain protein (39 kDa, Protein from Tetrahymena thermophila)
Cfap20 (22 kDa, Protein from Tetrahymena thermophila)
Coiled-coil domain-containing protein 153 (22 kDa, Protein from Tetrahymena thermophila)
Ef hand protein (124 kDa, Protein from Tetrahymena thermophila)
Cilia- and flagella-associated protein 91 (76 kDa, Protein from Tetrahymena thermophila)
Duf4201 domain-containing protein (94 kDa, Protein from Tetrahymena thermophila)
Coiled-coil protein, putative (105 kDa, Protein from Tetrahymena thermophila)
Calmodulin 7-2 (23 kDa, Protein from Tetrahymena thermophila)
Flagellar associated protein (52 kDa, Protein from Tetrahymena thermophila)
Wd40 domain protein (151 kDa, Protein from Tetrahymena thermophila)
Coiled-coil lobo-like protein, putative (101 kDa, Protein from Tetrahymena thermophila)
Flagella associated protein (114 kDa, Protein from Tetrahymena thermophila)
Dynein regulatory complex protein 10 (51 kDa, Protein from Tetrahymena thermophila)
Dynein regulatory complex protein 1/2 n-terminal domain-containing protein (98 kDa, Protein from Tetrahymena thermophila)
Wd40 domain protein (152 kDa, Protein from Tetrahymena thermophila)
Aaa family atpase cdc48 subfamily protein (101 kDa, Protein from Tetrahymena thermophila)
Ef-hand calcium-binding domain protein (22 kDa, Protein from Tetrahymena thermophila)
Growth-arrest-specific microtubule-binding protein (56 kDa, Protein from Tetrahymena thermophila)
Coiled-coil protein, putative (60 kDa, Protein from Tetrahymena thermophila)

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EMD-41189

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Baseplate of Nexin-dynein regulatory complex from Tetrahymena thermophila

Release date: Sept. 20, 2023
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8tek
Q-score: 0.273

Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, Legal T, Papoulas O, Janowska M, Valente-Paterno M, Marcotte EM, Wloga D, Bui KH

Nat Commun (2023) 14 pp. 5741-5741 [ Pubmed: 37714832 DOI: doi:10.1038/s41467-023-41480-7 ]

Sample:

Growth-arrest-specific microtubule-binding protein (55 kDa, Protein from Tetrahymena thermophila)
Cfap20 (22 kDa, Protein from Tetrahymena thermophila)
Flagellar associated protein (42 kDa, Protein from Tetrahymena thermophila)
Cilia- and flagella-associated protein 91 (76 kDa, Protein from Tetrahymena thermophila)
Duf4201 domain-containing protein (94 kDa, Protein from Tetrahymena thermophila)
Flagella associated protein (114 kDa, Protein from Tetrahymena thermophila)
Baseplate of nexin-dynein regulatory complex from tetrahymena thermophila (Cellular component from Tetrahymena thermophila)
Growth-arrest-specific microtubule-binding protein (56 kDa, Protein from Tetrahymena thermophila)
Dynein regulatory complex protein 1/2 n-terminal domain-containing protein (98 kDa, Protein from Tetrahymena thermophila)
Coiled-coil protein, putative (105 kDa, Protein from Tetrahymena thermophila)
Coiled-coil protein, putative (60 kDa, Protein from Tetrahymena thermophila)

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EMD-41251

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Linker domain of Nexin-dynein regulatory complex from Tetrahymena thermophila

Release date: Sept. 20, 2023
Resolution: 7.4 Å
EM Method: Single-particle
Fitted PDBs: 8th8
Q-score: 0.087

Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, Legal T, Papoulas O, Janowska M, Valente-Paterno M, Marcotte EM, Wloga D, Bui KH

Nat Commun (2023) 14 pp. 5741-5741 [ DOI: doi:10.1038/s41467-023-41480-7 Pubmed: 37714832 ]

Sample:

Coiled-coil domain-containing protein 153 (22 kDa, Protein from Tetrahymena thermophila)
Kinase domain protein (39 kDa, Protein from Tetrahymena thermophila)
Coiled-coil protein, putative (60 kDa, Protein from Tetrahymena thermophila)
Dynein regulatory complex protein 1/2 n-terminal domain-containing protein (98 kDa, Protein from Tetrahymena thermophila)
Coiled-coil lobo-like protein, putative (101 kDa, Protein from Tetrahymena thermophila)
Growth-arrest-specific microtubule-binding protein (56 kDa, Protein from Tetrahymena thermophila)
Linker domain of nexin-dynein regulatory complex from tetrahymena thermophila (Cell from Tetrahymena thermophila)
Calmodulin 7-2 (23 kDa, Protein from Tetrahymena thermophila)
Duf4201 domain-containing protein (94 kDa, Protein from Tetrahymena thermophila)
Growth-arrest-specific microtubule-binding protein (55 kDa, Protein from Tetrahymena thermophila)
Ef-hand calcium-binding domain protein (22 kDa, Protein from Tetrahymena thermophila)
Dynein regulatory complex protein 9 (44 kDa, Protein from Tetrahymena thermophila)
Lrrc48 protein (68 kDa, Protein from Tetrahymena thermophila)
Dynein regulatory complex protein 10 (51 kDa, Protein from Tetrahymena thermophila)
Aaa family atpase cdc48 subfamily protein (101 kDa, Protein from Tetrahymena thermophila)
Flagellar associated protein (52 kDa, Protein from Tetrahymena thermophila)

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EMD-41270

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Focused refinement of the N-DRC from the Tetrahymena WT subtomo

Release date: Sept. 20, 2023
Resolution: 21.2 Å
EM Method: Subtomogram averaging

Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, Legal T, Papoulas O, Janowska M, Valente-Paterno M, Marcotte EM, Wloga D, Bui KH

Nat Commun (2023) 14 pp. 5741-5741 [ Pubmed: 37714832 DOI: doi:10.1038/s41467-023-41480-7 ]

Sample:

Focused refinement of the n-drc from the tetrahymena wt subtomo (Cell from Tetrahymena thermophila)

EMD-41375

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Linker domain of N-DRC complex from Tetrahymena thermophila

Release date: Sept. 20, 2023
Resolution: 7.6 Å
EM Method: Single-particle

Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, Legal T, Papoulas O, Janowska M, Valente-Paterno M, Marcotte EM, Wloga D, Bui KH

Nat Commun (2023) 14 pp. 5741-5741 [ DOI: doi:10.1038/s41467-023-41480-7 Pubmed: 37714832 ]

Sample:

Linker domain of n-drc complex from tetrahymena thermophila (Cellular component from Tetrahymena thermophila)

EMD-41376

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96nm repeat of Doublet microtubule from Tetrahymena thermophila

Release date: Sept. 20, 2023
Resolution: 5.54 Å
EM Method: Single-particle

Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, Legal T, Papoulas O, Janowska M, Valente-Paterno M, Marcotte EM, Wloga D, Bui KH

Nat Commun (2023) 14 pp. 5741-5741 [ DOI: doi:10.1038/s41467-023-41480-7 Pubmed: 37714832 ]

Sample:

96nm repeat of doublet microtubule from tetrahymena thermophila (Cellular component from Tetrahymena thermophila)

EMD-41504

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DRC9/10 baseplate from Tetrahymena thermophila

Release date: Sept. 20, 2023
Resolution: 7.6 Å
EM Method: Single-particle

Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, Legal T, Papoulas O, Janowska M, Valente-Paterno M, Marcotte EM, Wloga D, Bui KH

Nat Commun (2023) 14 pp. 5741-5741 [ DOI: doi:10.1038/s41467-023-41480-7 Pubmed: 37714832 ]

Sample:

Drc9/10 baseplate from tetrahymena thermophila (Cellular component from Tetrahymena thermophila)

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