CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8ut3
Q-score: 0.58
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- An uca6 fab complex with one protomer of a h3 trimer (Complex from Homo sapiens)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Uca6 hc fv (13 kDa, Protein from Homo sapiens)
- Uca6 lc fv (11 kDa, Protein from Homo sapiens)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ut4
Q-score: 0.433
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin ha2 chain (28 kDa, Protein from Influenza A virus)
- 09-1b12 fab (Complex from Homo sapiens)
- An 09-1b12 fab complex with one protomer of a h1 trimer (Complex from Influenza A virus)
- 09-1b12 hc fv (13 kDa, Protein from Homo sapiens)
- 09-1b12 lc fv (12 kDa, Protein from Homo sapiens)
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8ut5
Q-score: 0.439
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- An uca6 fab complex with one protomer of a h3 trimer (Complex from Homo sapiens)
- Hemagglutinin ha2 chain (28 kDa, Protein from Influenza A virus)
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Uca6_n55t lc fv (11 kDa, Protein from Homo sapiens)
- Uca6_n55t hc fv (13 kDa, Protein from Homo sapiens)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8ut6
Q-score: 0.549
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Polyclonal fab purified from mice sera (Complex from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- H3d15 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- H3d15 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- Mice polyclonal fab complex with one protomer of a h3 trimer (Complex from Influenza A virus)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8ut7
Q-score: 0.591
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Polyclonal fab purified from mice sera (Complex from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- H3d28 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- H3d28 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- A/perth/16/2009 h3 (Complex from Influenza A virus)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ut8
Q-score: 0.442
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- H7d15 polyclonal fab purified from mice sera (Complex from Mus musculus)
- Hemagglutinin ha1 chain (34 kDa, Protein from Influenza A virus)
- Hemagglutinin ha2 chain (26 kDa, Protein from Influenza A virus)
- H7d15 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- H7d15 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- Mice polyclonal fab complex with one protomer of a h7 trimer (Complex from Influenza A virus)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ut9
Q-score: 0.461
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- H7d28 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- H7d28 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- Hemagglutinin ha1 chain (34 kDa, Protein from Influenza A virus)
- H7d28 polyclonal fab purified from mice sera (Complex from Mus musculus)
- Hemagglutinin ha2 chain (26 kDa, Protein from Influenza A virus)
- Mice polyclonal fab complex with one protomer of a h7 trimer (Complex from Influenza A virus)
CryoEM structure of A/Perth/16/2009 H3
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
CryoEM map of A/Shanghai/1/2013 H7 HA
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
H1 Solomon Islands 2006 hemagglutinin in complex with Ab111
Caradonna TM, Ronsard L, Yousif AS, Windsor IW, Hecht R, Bracamonte-Moreno T, Roffler AA, Maron MJ, Maurer DP, Feldman J, Marchiori E, Barnes RM, Rohrer D, Lonberg N, Sempowski GD, Kepler TB, Kuraoka M, Lingwood D, Schmidt AG
Cell Rep (2022) 41 pp. 111628-111628 [ Pubmed: 36351401 DOI: doi:10.1016/j.celrep.2022.111628 ]