CryoEM structure of GroEL-ADP.BeF3-Rubisco.
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ba8
Q-score: 0.407
Gardner S, Darrow MC, Lukoyanova N, Thalassinos K, Saibil HR
PNAS (2023) 120 pp. e2308933120- [ DOI: doi:10.1073/pnas.2308933120 Pubmed: 38064510 ]
- Potassium ion (39 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Water (18 Da, Ligand)
- Beryllium trifluoride ion (66 Da, Ligand)
- Chaperonin groel (57 kDa, Protein from Escherichia coli K-12)
- Groel-adp.befx-rubisco (802 kDa, Complex from Escherichia coli)
CryoEM structure of GroEL-GroES-ADP.AlF3-Rubisco.
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8ba9
Q-score: 0.395
Gardner S, Darrow MC, Lukoyanova N, Thalassinos K, Saibil HR
PNAS (2023) 120 pp. e2308933120- [ DOI: doi:10.1073/pnas.2308933120 Pubmed: 38064510 ]
- 60 kda chaperonin (55 kDa, Protein from Escherichia coli K-12)
- Groel-adp.befx-rubisco (802 kDa, Complex from Escherichia coli)
- Potassium ion (39 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Co-chaperonin groes (10 kDa, Protein from Escherichia coli K-12)
- Aluminum fluoride (83 Da, Ligand)
CryoEM structure of nucleotide-free GroEL-Rubisco.
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 8ba7
Q-score: 0.325
Gardner S, Darrow MC, Lukoyanova N, Thalassinos K, Saibil HR
PNAS (2023) 120 pp. e2308933120-e2308933120 [ DOI: doi:10.1073/pnas.2308933120 Pubmed: 38064510 ]
- Groel (802 kDa, Complex from Escherichia coli)
- Chaperonin groel (57 kDa, Protein from Escherichia coli)
CryoEM reconstruction of GroEL-ATP-Rubisco.
Gardner S, Darrow MC, Lukoyanova N, Thalassinos K, Saibil HR
PNAS (2023) 120 pp. e2308933120-e2308933120 [ DOI: doi:10.1073/pnas.2308933120 Pubmed: 38064510 ]
- Groel-atp (Protein from Escherichia coli)
- Groel (802 kDa, Complex from Escherichia coli)
CryoEM reconstruction of GroEL-GroES-ADP.AlF3-Rubisco, class I.
Gardner S, Darrow MC, Lukoyanova N, Thalassinos K, Saibil HR
PNAS (2023) 120 pp. e2308933120-e2308933120 [ DOI: doi:10.1073/pnas.2308933120 Pubmed: 38064510 ]
CryoEM reconstruction of GroEL-GroES-ADP.AlF3-Rubisco, class III.
Gardner S, Darrow MC, Lukoyanova N, Thalassinos K, Saibil HR
PNAS (2023) 120 pp. e2308933120-e2308933120 [ DOI: doi:10.1073/pnas.2308933120 Pubmed: 38064510 ]
- Groel-groes-adp.alf3-rubisco (802 kDa, Complex from Escherichia coli)
CryoEM reconstruction of GroEL-GroES-ADP.AlF3-Rubisco, class IV.
Gardner S, Darrow MC, Lukoyanova N, Thalassinos K, Saibil HR
PNAS (2023) 120 pp. e2308933120-e2308933120 [ DOI: doi:10.1073/pnas.2308933120 Pubmed: 38064510 ]
- Groel-groes-adp.alf3-rubisco (802 kDa, Complex from Escherichia coli)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8b6v
Q-score: 0.45
Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry JK, Altier D, Lum A, Scolaro E, Ortega CP, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu AL, Nelson ME, Eswar N, Topf M, Saibil HR
Nat Commun (2023) 14 pp. 4171-4171 [ Pubmed: 37443175 DOI: doi:10.1038/s41467-023-39891-7 ]
- Mpf2ba1 22-mer pre-pore (Complex from Pseudomonas monteilii)
- Mpf2ba1 (49 kDa, Protein from Pseudomonas monteilii)
- Magnesium ion (24 Da, Ligand)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8b6w
Q-score: 0.446
Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry JK, Altier D, Lum A, Scolaro E, Ortega CP, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu AL, Nelson ME, Eswar N, Topf M, Saibil HR
Nat Commun (2023) 14 pp. 4171-4171 [ DOI: doi:10.1038/s41467-023-39891-7 Pubmed: 37443175 ]
- Magnesium ion (24 Da, Ligand)
- Mpf2ba1 (49 kDa, Protein from Pseudomonas monteilii)
- Mpf2ba1 21-mer pore (Complex from Pseudomonas monteilii)
gp6/gp15/gp16 connector complex of bacteriophage SPP1
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7z4w
Q-score: 0.643
Orlov I, Roche S, Brasiles S, Lukoyanova N, Vaney MC, Tavares P, Orlova EV
Nat Commun (2022) 13 pp. 7283-7283 [ DOI: doi:10.1038/s41467-022-34999-8 Pubmed: 36435855 ]
- Head completion protein gp15 (11 kDa, Protein from Bacillus subtilis)
- Gp6(12) gp15(12) gp16(6) portal complex (connector) of spp1 bacteriophage (902 kDa, Complex from Bacillus subtilis)
- Water (18 Da, Ligand)
- Head completion protein gp16 (12 kDa, Protein from Bacillus subtilis)
- Portal protein (57 kDa, Protein from Bacillus subtilis)