Focused refinement of V. radiata respiratory supercomplex I+III2 around complex I heel
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ Pubmed: 36581760 DOI: doi:10.1038/s41477-022-01306-8 ]
Single particle cryogenic electron micrographs of respiratory supercomplex I+III2 from Vigna radiata
Maldonado M, Abe KM, Fan Z, Letts JA
Nat Plants (2022) 9 pp. 157-168 [ DOI: 10.1038/s41477-022-01306-8 Pubmed: 36581760 ]
Image sets:
Vigna radiata supercomplex I+III2 (full bridge)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8e73
Q-score: 0.536
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ DOI: doi:10.1038/s41477-022-01306-8 Pubmed: 36581760 ]
- Nducal2 (28 kDa, Protein from Vigna radiata)
- Ndua7 (14 kDa, Protein from Vigna radiata)
- Ndup2 (12 kDa, Protein from Vigna radiata)
- Ndus8 (25 kDa, Protein from Vigna radiata)
- Ndua2 (10 kDa, Protein from Vigna radiata)
- Ndub10 (12 kDa, Protein from Vigna radiata)
- Ubiquinone-10 (863 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Ndua6 (14 kDa, Protein from Vigna radiata)
- Ndua9 (43 kDa, Protein from Vigna radiata)
- Qcr9 (8 kDa, Protein from Vigna radiata)
- Ndup1 (11 kDa, Protein from Vigna radiata)
- Qcr7 (14 kDa, Protein from Vigna radiata)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- S-[2-({n-[(2s)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate (568 Da, Ligand)
- Nduv2 (27 kDa, Protein from Vigna radiata)
- Ndua12 (18 kDa, Protein from Vigna radiata)
- Mpp-alpha (protomer 2) (54 kDa, Protein from Vigna radiata)
- Nduab1-alpha (14 kDa, Protein from Vigna radiata)
- Qcr6 (8 kDa, Protein from Vigna radiata)
- Ndua13 (16 kDa, Protein from Vigna radiata)
- Ndub4 (8 kDa, Protein from Vigna radiata)
- Ndua5 (18 kDa, Protein from Vigna radiata)
- Ndua3 (6 kDa, Protein from Vigna radiata)
- Cyc1 (cyt c1) (33 kDa, Protein from Vigna radiata)
- Nad3 (13 kDa, Protein from Vigna radiata)
- Nad4 (55 kDa, Protein from Vigna radiata)
- Nad2 (54 kDa, Protein from Vigna radiata)
- Ndus4 (16 kDa, Protein from Vigna radiata)
- Vigna radiata supercomplex i+iii2 (full bridge) (Complex from Vigna radiata)
- Nduca2 (29 kDa, Protein from Vigna radiata)
- Ndus6 (11 kDa, Protein from Vigna radiata)
- Zinc ion (65 Da, Ligand)
- Mpp-alpha (protomer 1) (55 kDa, Protein from Vigna radiata)
- Nduca1 (29 kDa, Protein from Vigna radiata)
- Ndus2 (45 kDa, Protein from Vigna radiata)
- Nduv1 (53 kDa, Protein from Vigna radiata)
- Ndux1 (10 kDa, Protein from Vigna radiata)
- Nad5 (74 kDa, Protein from Vigna radiata)
- Ndus5 (9 kDa, Protein from Vigna radiata)
- Nad1 (35 kDa, Protein from Vigna radiata)
- Qcr10 (ucry) (8 kDa, Protein from Vigna radiata)
- Ndua1 (7 kDa, Protein from Vigna radiata)
- Ndua11 (17 kDa, Protein from Vigna radiata)
- Heme c (618 Da, Ligand)
- Nad6 (23 kDa, Protein from Vigna radiata)
- Cob (cyt b) (44 kDa, Protein from Vigna radiata)
- Nduab1-beta (13 kDa, Protein from Vigna radiata)
- Nduc2 (9 kDa, Protein from Vigna radiata)
- Ndus1 (81 kDa, Protein from Vigna radiata)
- Ndus7 (23 kDa, Protein from Vigna radiata)
- Qcr8 (8 kDa, Protein from Vigna radiata)
- Ucr1 (rieske iron-sulfur protein subunit) (30 kDa, Protein from Vigna radiata)
- Fe (iii) ion (55 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Ndub9 (13 kDa, Protein from Vigna radiata)
- Ndus3 (22 kDa, Protein from Vigna radiata)
- Ndub6 (9 kDa, Protein from Vigna radiata)
- Iron/sulfur cluster (351 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Ndua8 (12 kDa, Protein from Vigna radiata)
- Ndub7 (11 kDa, Protein from Vigna radiata)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Mpp-beta (58 kDa, Protein from Vigna radiata)
- Nad4l (11 kDa, Protein from Vigna radiata)
- Flavin mononucleotide (456 Da, Ligand)
- Ndub3 (7 kDa, Protein from Vigna radiata)
- Ndub11 (13 kDa, Protein from Vigna radiata)
- Ndub8 (13 kDa, Protein from Vigna radiata)
- Ndub2 (7 kDa, Protein from Vigna radiata)
- Ndufx (17 kDa, Protein from Vigna radiata)
- Ndup4 (7 kDa, Protein from Vigna radiata)
Vigna radiata supercomplex I+III2 - bridgeless classes 1
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ Pubmed: 36581760 DOI: doi:10.1038/s41477-022-01306-8 ]
Vigna radiata respiratory complex I
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ DOI: doi:10.1038/s41477-022-01306-8 Pubmed: 36581760 ]
Focused refinement of V. radiata respiratory supercomplex I+III2 around complex I bridge
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ DOI: doi:10.1038/s41477-022-01306-8 Pubmed: 36581760 ]
Focused refinement of V. radiata respiratory supercomplex I+III2 around complex I Pd domain
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ DOI: doi:10.1038/s41477-022-01306-8 Pubmed: 36581760 ]
Focused refinement of V. radiata respiratory supercomplex I+III2 around complex III2 dimer
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ DOI: doi:10.1038/s41477-022-01306-8 Pubmed: 36581760 ]
Focused refinement of V. radiata respiratory supercomplex I+III2 around complex I N module
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ DOI: doi:10.1038/s41477-022-01306-8 Pubmed: 36581760 ]
Maldonado M, Fan Z, Abe KM, Letts JA
Nat Plants (2023) 9 pp. 157-168 [ Pubmed: 36581760 DOI: doi:10.1038/s41477-022-01306-8 ]