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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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primary_citation_author:"Reigan P"

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EMD-29407

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60S subunit of the Giardia lamblia 80S ribosome

Release date: Jan. 31, 2024
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 8fru
Q-score: 0.648

Eiler DR, Wimberly BT, Bilodeau DY, Taliaferro JM, Reigan P, Rissland OS, Kieft JS

Structure (2024) 32 pp. 400- [ DOI: doi:10.1016/j.str.2023.12.015 Pubmed: 38242118 ]

Sample:

60s ribosomal protein el36 (10 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul14 (15 kDa, Protein from Giardia intestinalis assemblage A)
Potassium ion (39 Da, Ligand)
60s ribosomal protein el32 (15 kDa, Protein from Giardia intestinalis assemblage A)
5s rrna (38 kDa, RNA from Giardia intestinalis assemblage A)
60s ribosomal protein ul24 (15 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el37 (11 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul13 (22 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el14 (14 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul6 (20 kDa, Protein from Giardia intestinalis assemblage A)
5.8s rrna (45 kDa, RNA from Giardia intestinalis assemblage A)
60s ribosomal protein el21 (18 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el40 (14 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el15 (24 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el24 (12 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el29 (7 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el42 (12 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el20 (24 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el27 (15 kDa, Protein from Giardia intestinalis assemblage A)
Magnesium ion (24 Da, Ligand)
60s ribosomal protein el31 (12 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul15 (17 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el41 (2 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el43 (10 kDa, Protein from Giardia intestinalis assemblage A)
Spermidine (145 Da, Ligand)
60s ribosomal protein el8 (25 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el38 (8 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul18 (33 kDa, Protein from Giardia intestinalis assemblage A)
Sodium ion (22 Da, Ligand)
60s ribosomal protein el39 (6 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul16 (24 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el13 (26 kDa, Protein from Giardia intestinalis assemblage A)
28s rrna (871 kDa, RNA from Giardia intestinalis assemblage A)
60s ribosomal protein el19 (23 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el33 (13 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el22 (19 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el30 (11 kDa, Protein from Giardia intestinalis assemblage A)
Zinc ion (65 Da, Ligand)
60s ribosomal protein ul4 (35 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el18 (20 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein el34 (13 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul5 (19 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul2 (27 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul30 (27 kDa, Protein from Giardia intestinalis assemblage A)
Water (18 Da, Ligand)
60s ribosomal subunit of the 80s giardia intestinalis assemblage a ribosome (Complex from Giardia intestinalis assemblage A)
60s ribosomal protein ul22 (18 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul29 (14 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul23 (16 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal protein ul3 (42 kDa, Protein from Giardia intestinalis assemblage A)

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EMD-29730

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40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.

Release date: Jan. 31, 2024
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8g4s
Q-score: 0.51

Eiler DR, Wimberly BT, Bilodeau DY, Taliaferro JM, Reigan P, Rissland OS, Kieft JS

Structure (2024) 32 pp. 400- [ DOI: doi:10.1016/j.str.2023.12.015 Pubmed: 38242118 ]

Sample:

Ribosomal protein s27a (15 kDa, Protein from Giardia intestinalis assemblage A)
18s rrna (470 kDa, RNA from Giardia intestinalis assemblage A)
40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s7 (23 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s29a (15 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis assemblage A)
Zinc ion (65 Da, Ligand)
Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis assemblage A)
Mrna (2 kDa, RNA from Giardia intestinalis assemblage A)
E-site trna (23 kDa, RNA from Giardia intestinalis assemblage A)
Ssu ribosomal protein s17p (23 kDa, Protein from Giardia intestinalis assemblage A)
Ssu ribosomal protein s8p (fragment) (14 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis assemblage A)
Water (18 Da, Ligand)
Magnesium ion (24 Da, Ligand)
40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal subunit of the 80s giardia intestinalis assemblage a ribosome with emetine bound in v1 conformation (Complex from Giardia intestinalis assemblage A)
A-site trna (24 kDa, RNA from Giardia intestinalis assemblage A)
Ssu ribosomal protein s19e (fragment) (17 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis assemblage A)
Ssu ribosomal protein s7p (fragment) (21 kDa, Protein from Giardia intestinalis assemblage A)
Emetine (480 Da, Ligand)
P-site trna (24 kDa, RNA from Giardia intestinalis assemblage A)
Ssu ribosomal protein s12p (15 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s27 (14 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s12 (14 kDa, Protein from Giardia intestinalis assemblage A)

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EMD-29918

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80S Giardia lamblia ribosome at 2.67 angstroms resolution with Emetine in the the V2 conformation

Release date: Jan. 31, 2024
Resolution: 2.67 Å
EM Method: Single-particle

Eiler DR, Wimberly BT, Bilodeau DY, Taliaferro JM, Reigan P, Rissland OS, Kieft JS

Structure (2024) 32 pp. 400-410.e4 [ DOI: doi:10.1016/j.str.2023.12.015 Pubmed: 38242118 ]

Sample:

60s ribosomal subunit of the 80s giardia intestinalis assemblage a ribosome (Complex from Giardia intestinalis assemblage A)

EMD-29495

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40S subunit of the Giardia lamblia 80S ribosome

Release date: Jan. 24, 2024
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 8fvy
Q-score: 0.51

Eiler DR, Wimberly BT, Bilodeau DY, Taliaferro JM, Reigan P, Rissland OS, Kieft JS

Structure (2024) 32 pp. 400- [ DOI: doi:10.1016/j.str.2023.12.015 Pubmed: 38242118 ]

Sample:

40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s27a (15 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s29a (15 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s27 (14 kDa, Protein from Giardia intestinalis assemblage A)
Ssu ribosomal protein s17p (23 kDa, Protein from Giardia intestinalis assemblage A)
Magnesium ion (24 Da, Ligand)
40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis assemblage A)
Trna (23 kDa, RNA from Giardia intestinalis assemblage A)
Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis assemblage A)
Ssu ribosomal protein s19e (fragment) (17 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s12 (14 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s7 (23 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis assemblage A)
18s rrna (470 kDa, RNA from Giardia intestinalis assemblage A)
40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis assemblage A)
Ssu ribosomal protein s8p (fragment) (14 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis assemblage A)
Zinc ion (65 Da, Ligand)
40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis assemblage A)
40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis assemblage A)
Ssu ribosomal protein s12p (15 kDa, Protein from Giardia intestinalis assemblage A)
Water (18 Da, Ligand)
40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis assemblage A)
Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis assemblage A)
Ssu ribosomal protein s7p (fragment) (21 kDa, Protein from Giardia intestinalis assemblage A)
60s ribosomal subunit of the 80s giardia intestinalis assemblage a ribosome (Complex from Giardia intestinalis assemblage A)
Emetine (480 Da, Ligand)
40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis assemblage A)

[Show more]

Sort by: Download

Showing 1 - 4 of 4. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [4]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: