CAND1-CUL1-RBX1-SKP1-SKP2-CKS1-CDK2
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8or0
Q-score: 0.218
Shaaban M, Clapperton JA, Ding S, Kunzelmann S, Maeots ME, Maslen SL, Skehel JM, Enchev RI
Mol Cell (2023) 83 pp. 2332- [ Pubmed: 37339624 DOI: doi:10.1016/j.molcel.2023.05.034 ]
- Cullin-associated nedd8-dissociated protein 1 (137 kDa, Protein from Homo sapiens)
- Cyclin-dependent kinases regulatory subunit 1 (8 kDa, Protein from Homo sapiens)
- Cyclin-dependent kinase 2 (33 kDa, Protein from Homo sapiens)
- Cand1-cul1-rbx1-skp1-skp2-cks1-cdk2 (Complex from Homo sapiens)
- Cullin-1 (93 kDa, Protein from Homo sapiens)
- S-phase kinase-associated protein 2 (48 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
- S-phase kinase-associated protein 1 (18 kDa, Protein from Homo sapiens)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8or2
Q-score: 0.368
Shaaban M, Clapperton JA, Ding S, Kunzelmann S, Maeots ME, Maslen SL, Skehel JM, Enchev RI
Mol Cell (2023) 83 pp. 2332- [ Pubmed: 37339624 DOI: doi:10.1016/j.molcel.2023.05.034 ]
- Cullin-associated nedd8-dissociated protein 1 (137 kDa, Protein from Homo sapiens)
- Cullin-1 (93 kDa, Protein from Homo sapiens)
- Dcn1-like protein 1 (30 kDa, Protein from Homo sapiens)
- Cand1-cul1-rbx1-dcnl1 (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
CAND1-CUL1-RBX1-SKP1-SKP2-DCNL1
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8or3
Q-score: 0.415
Shaaban M, Clapperton JA, Ding S, Kunzelmann S, Maeots ME, Maslen SL, Skehel JM, Enchev RI
Mol Cell (2023) 83 pp. 2332- [ DOI: doi:10.1016/j.molcel.2023.05.034 Pubmed: 37339624 ]
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
- Dcn1-like protein 1 (30 kDa, Protein from Homo sapiens)
- Cullin-associated nedd8-dissociated protein 1 (137 kDa, Protein from Homo sapiens)
- Cullin-1 (93 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Cand1-cul1-rbx1-skp1-skp2-cks1-cdk2-cycline-dcnl1 (Complex from Homo sapiens)
- S-phase kinase-associated protein 1 (18 kDa, Protein from Homo sapiens)
- S-phase kinase-associated protein 2 (48 kDa, Protein from Homo sapiens)
Partially dissociated CAND1-CUL1-RBX1-SKP1-SKP2-CKS1-CDK2
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8or4
Q-score: 0.285
Shaaban M, Clapperton JA, Ding S, Kunzelmann S, Maeots ME, Maslen SL, Skehel JM, Enchev RI
Mol Cell (2023) 83 pp. 2332- [ Pubmed: 37339624 DOI: doi:10.1016/j.molcel.2023.05.034 ]
- Cullin-associated nedd8-dissociated protein 1 (137 kDa, Protein from Homo sapiens)
- Cyclin-dependent kinases regulatory subunit 1 (8 kDa, Protein from Homo sapiens)
- Cyclin-dependent kinase 2 (33 kDa, Protein from Homo sapiens)
- Cullin-1 (93 kDa, Protein from Homo sapiens)
- Partially dissociated cand1-cul1-rbx1-skp1-skp2-cks1-cdk2 (Complex from Homo sapiens)
- S-phase kinase-associated protein 2 (48 kDa, Protein from Homo sapiens)
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
- S-phase kinase-associated protein 1 (18 kDa, Protein from Homo sapiens)
ATG9A and ATG2A form a heteromeric complex essential for autophagosome formation
van Vliet AR, Chiduza GN, Maslen SL, Pye VE, Joshi D, De Tito S, Jefferies HBJ, Christodoulou E, Roustan C, Punch E, Hervas JH, O'Reilly N, Skehel JM, Cherepanov P, Tooze SA
Mol Cell (2022) 82 pp. 4324-4339.e8 [ DOI: doi:10.1016/j.molcel.2022.10.017 Pubmed: 36347259 ]
Low resolution 3D reconstruction of ATG2A from cryo-EM
van Vliet AR, Chiduza GN, Maslen SL, Pye VE, Joshi D, De Tito S, Jefferies HBJ, Christodoulou E, Roustan C, Punch E, Hervas JH, O'Reilly N, Skehel JM, Cherepanov P, Tooze SA
Mol Cell (2022) 82 pp. 4324-4339.e8 [ DOI: doi:10.1016/j.molcel.2022.10.017 Pubmed: 36347259 ]
Polymerase module of CPF in complex with Mpe1 and a pre-cleaved CYC1 RNA
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7zgp
Q-score: 0.624
Rodriguez-Molina JB, O'Reilly FJ, Fagarasan H, Sheekey E, Maslen S, Skehel JM, Rappsilber J, Passmore LA
Mol Cell (2022) 82 pp. 2490- [ Pubmed: 35584695 DOI: doi:10.1016/j.molcel.2022.04.021 ]
- Polyadenylation factor subunit 2 (53 kDa, Protein from Saccharomyces cerevisiae)
- Pre-cleaved cyc1 (13 kDa, RNA from Saccharomyces cerevisiae)
- Mrna 3'-end-processing protein yth1 (24 kDa, Protein from Saccharomyces cerevisiae)
- Mpe1 isoform 1 (49 kDa, Protein from Saccharomyces cerevisiae)
- Protein cft1 (153 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Polymerase module-mpe1-rna (Complex from Saccharomyces cerevisiae)
Polymerase module of yeast CPF in complex with the yPIM of Cft2
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7zgq
Q-score: 0.582
Rodriguez-Molina JB, O'Reilly FJ, Fagarasan H, Sheekey E, Maslen S, Skehel JM, Rappsilber J, Passmore LA
Mol Cell (2022) 82 pp. 2490- [ DOI: doi:10.1016/j.molcel.2022.04.021 Pubmed: 35584695 ]
- Mrna 3'-end-processing protein yth1 (24 kDa, Protein from Saccharomyces cerevisiae)
- Protein cft1 (153 kDa, Protein from Saccharomyces cerevisiae)
- Cleavage factor two protein 2 (80 kDa, Protein from Saccharomyces cerevisiae)
- Polyadenylation factor subunit 2 (53 kDa, Protein from Saccharomyces cerevisiae)
- Polymerase module-mpe1-cft2(s)-rna (Complex from Saccharomyces cerevisiae)
Polymerase module of yeast CPF in complex with Mpe1, the yPIM of Cft2 and the pre-cleaved CYC1 RNA
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7zgr
Q-score: 0.61
Rodriguez-Molina JB, O'Reilly FJ, Fagarasan H, Sheekey E, Maslen S, Skehel JM, Rappsilber J, Passmore LA
Mol Cell (2022) 82 pp. 2490- [ Pubmed: 35584695 DOI: doi:10.1016/j.molcel.2022.04.021 ]
- Polyadenylation factor subunit 2 (53 kDa, Protein from Saccharomyces cerevisiae)
- Mrna 3'-end-processing protein yth1 (24 kDa, Protein from Saccharomyces cerevisiae)
- Cleavage factor two protein 2 (80 kDa, Protein from Saccharomyces cerevisiae)
- Mpe1 isoform 1 (49 kDa, Protein from Saccharomyces cerevisiae)
- Protein cft1 (153 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Pre-cleaved cyc1 (13 kDa, RNA from Saccharomyces cerevisiae)
- Polymerase module-mpe1-ypim-rna (Complex from Saccharomyces cerevisiae)
Cryo-Em structure of the hexameric RUVBL1-RUVBL2 in complex with ZNHIT2
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7p6x
Q-score: 0.313
Serna M, Gonzalez-Corpas A, Cabezudo S, Lopez-Perrote A, Degliesposti G, Zarzuela E, Skehel JM, Munoz J, Llorca O
Nucleic Acids Res (2022) 50 pp. 1128-1146 [ DOI: doi:10.1093/nar/gkab1267 Pubmed: 34951455 ]
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Hexameric ruvbl1-ruvbl2 aaa ring in complex with znhit2 (Complex from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)