Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in extended state, 3-fold symmetrised
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6rbk
Q-score: 0.529
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
Cryo-EM structure of the anti-feeding prophage (AFP) helical sheath-tube complex in extended state
Resolution: 2.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 6rbn
Q-score: 0.586
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
- Afp2 (38 kDa, Protein from Serratia entomophila)
- Afp1 (16 kDa, Protein from Serratia entomophila)
- Cryo-em structure of the anti-feeding prophage (afp) helical sheath-tube complex in extended state (Complex from Serratia entomophila)
- Afp3 (48 kDa, Protein from Serratia entomophila)
Cryo-EM structure of the anti-feeding prophage (AFP) sheath-tube in contracted state, C6 symmetrized
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
Cryo-EM structure of the anti-feeding prophage (AFP) needle from signal-subtracted particles
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in contracted state
Resolution: 5.4 Å
EM Method: Single-particle
Fitted PDBs: 6rgl
Q-score: 0.275
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
- Afp2 (38 kDa, Protein from Serratia entomophila)
- Afp4 (45 kDa, Protein from Serratia entomophila)
- Afp3 (48 kDa, Protein from Serratia entomophila)
- Cryo-em structure of the anti-feeding prophage (afp) baseplate in contracted state (Complex from Serratia entomophila)
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate, 6-fold symmetrised
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6rao
Q-score: 0.51
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
- Afp1 (16 kDa, Protein from Serratia entomophila)
- Afp9 (15 kDa, Protein from Serratia entomophila)
- Afp12 (106 kDa, Protein from Serratia entomophila)
- Cryo-em structure of the anti-feeding prophage (afp) baseplate, 6-fold symmetrised (Complex from Serratia entomophila)
- Afp2 (38 kDa, Protein from Serratia entomophila)
- Afp5 (17 kDa, Protein from Serratia entomophila)
- Afp7 (25 kDa, Protein from Serratia entomophila)
- Afp4 (45 kDa, Protein from Serratia entomophila)
- Afp11 (67 kDa, Protein from Serratia entomophila)
- Afp3 (48 kDa, Protein from Serratia entomophila)
Composite map of an entire contractile injection device : the anti-feeding prophage (AFP)
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ DOI: doi:10.1038/s41564-019-0530-6 Pubmed: 31384001 ]
Cryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6rap
Q-score: 0.517
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
- Afp1 (16 kDa, Protein from Serratia entomophila)
- Cryo-em structure of the anti-feeding prophage cap (afp tube terminating cap) (Complex from Serratia entomophila)
- Afp2 (38 kDa, Protein from Serratia entomophila)
- Afp16 (32 kDa, Protein from Serratia entomophila)
- Afp3 (48 kDa, Protein from Serratia entomophila)
Cryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap), ending with Afp3
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
Cryo-EM structure of the anti-feeding prophage (AFP) helical sheath in contracted state
Resolution: 3.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 6rc8
Q-score: 0.453
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
- Afp2 (38 kDa, Protein from Serratia entomophila)
- Afp3 (48 kDa, Protein from Serratia entomophila)
- Cryo-em structure of the anti-feeding prophage (afp) helical sheath in contracted state (Complex from Serratia entomophila)