Cryo-EM structure of PqqU with ligand PQQ
Munder F, Voutsinos M, Hantke K, Venugopal H, Grinter R
To Be Published
- Water (18 Da, Ligand)
- Pyrroloquinoline quinone (330 Da, Ligand)
- Pyrroloquinoline quinone transporter (78 kDa, Protein from Escherichia coli BW25113)
- Calcium ion (40 Da, Ligand)
- Complex of pqqu with pqq (78 kDa, Complex from Escherichia coli BW25113)
GPR3 Orphan G-coupled Protein Receptor in complex with Dominant Negative Gs.
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 8u8f
Q-score: 0.422
Russell IC, Zhang X, Bumbak F, McNeill SM, Josephs TM, Leeming MG, Christopoulos G, Venugopal H, Flocco MM, Sexton PM, Wootten D, Belousoff MJ
Biochemistry (2024) 63 pp. 625-631 [ DOI: doi:10.1021/acs.biochem.3c00647 Pubmed: 38376112 ]
- Active state, gpr3 complex with dominant negative g-alphas. (Complex from Homo sapiens)
- Palmitic acid (256 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (6 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(s) subunit alpha isoforms short (45 kDa, Protein from Homo sapiens)
- G-protein coupled receptor 3 (41 kDa, Protein from Homo sapiens)
CryoEM structure of MFRV-VILP bound to IGF1Rzip
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 8tan
Q-score: 0.424
Chrudinova M, Kirk NS, Chuard A, Venugopal H, Zhang F, Lubos M, Gelfanov V, Panikova T, Zakova L, Cutone J, Mojares M, DiMarchi R, Jiracek J, Altindis E
Mol Metab (2024) 80 pp. 101863-101863 [ DOI: doi:10.1016/j.molmet.2023.101863 Pubmed: 38182007 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 1:2 complex of mfrv-vilp bound to igf1rzip (Complex)
- Mfrv-vilp (Complex from Mandarin fish ranavirus)
- Insulin-like growth factor 1 receptor (108 kDa, Protein from Homo sapiens)
- Igf1rzip (Complex from Homo sapiens)
- Insulin-like growth factor (6 kDa, Protein from Mandarin fish ranavirus)
Consensus refinement of the h12-LOX in a dimeric form
Mobbs JI, Black KA, Tran M, Burger WAC, Venugopal H, Holman TR, Holinstat M, Thal DM, Glukhova A
Blood (2023) 142 pp. 1233-1242 [ Pubmed: 37506345 DOI: doi:10.1182/blood.2023020441 ]
The local refinement map of a "closed" subunit of a 12-LOX dimer
Mobbs JI, Black KA, Tran M, Burger WAC, Venugopal H, Holman TR, Holinstat M, Thal DM, Glukhova A
Blood (2023) 142 pp. 1233-1242 [ DOI: doi:10.1182/blood.2023020441 Pubmed: 37506345 ]
The local refinement map of an "open" subunit of a 12-LOX dimer
Mobbs JI, Black KA, Tran M, Burger WAC, Venugopal H, Holman TR, Holinstat M, Thal DM, Glukhova A
Blood (2023) 142 pp. 1233-1242 [ Pubmed: 37506345 DOI: doi:10.1182/blood.2023020441 ]
The consensus map of a 12-LOX hexamer
Mobbs JI, Black KA, Tran M, Burger WAC, Venugopal H, Holman TR, Holinstat M, Thal DM, Glukhova A
Blood (2023) 142 pp. 1233-1242 [ DOI: doi:10.1182/blood.2023020441 Pubmed: 37506345 ]
The local refinement map of a single subunit of a 12-LOX hexamer
Mobbs JI, Black KA, Tran M, Burger WAC, Venugopal H, Holman TR, Holinstat M, Thal DM, Glukhova A
Blood (2023) 142 pp. 1233-1242 [ Pubmed: 37506345 DOI: doi:10.1182/blood.2023020441 ]
The structure of h12-LOX in monomeric form
Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 8ghb
Q-score: 0.533
Mobbs JI, Black KA, Tran M, Burger WAC, Venugopal H, Holman TR, Holinstat M, Thal DM, Glukhova A
Blood (2023) 142 pp. 1233-1242 [ Pubmed: 37506345 DOI: doi:10.1182/blood.2023020441 ]
- Polyunsaturated fatty acid lipoxygenase alox12 (76 kDa, Protein from Homo sapiens)
- Fe (ii) ion (55 Da, Ligand)
- Monomeric human 12-lipoxygenase (75 kDa, Complex from Homo sapiens)
The structure of h12-LOX in dimeric form
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8ghc
Q-score: 0.615
Mobbs JI, Black KA, Tran M, Burger WAC, Venugopal H, Holman TR, Holinstat M, Thal DM, Glukhova A
Blood (2023) 142 pp. 1233-1242 [ Pubmed: 37506345 DOI: doi:10.1182/blood.2023020441 ]
- Dimeric human 12-lipoxygenase (150 kDa, Complex from Homo sapiens)
- Fe (ii) ion (55 Da, Ligand)
- Polyunsaturated fatty acid lipoxygenase alox12 (76 kDa, Protein from Homo sapiens)