Complex of Echo 18 and FcRn at pH7.4
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 7xxa
Q-score: 0.49
Chen X, Qu X, Liu C, Zhang Y, Zhang G, Han P, Duan Y, Li Q, Wang L, Ruan W, Wang P, Wei W, Gao GF, Zhao X, Xie Z
Mbio (2022) 13 pp. e0116622-e0116622 [ Pubmed: 35862785 DOI: doi:10.1128/mbio.01166-22 ]
- Echovirus e18 (Complex from Echovirus E18)
- Vp1 (35 kDa, Protein from Echovirus E18)
- Vp3 (26 kDa, Protein from Echovirus E18)
- Fcrn (Complex)
- Homo sapiens (Virus from Homo sapiens)
- Igg receptor fcrn large subunit p51 (29 kDa, Protein from Homo sapiens)
- Vp2 (28 kDa, Protein from Echovirus E18)
- Vp4 (7 kDa, Protein from Echovirus E18)
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 7xxg
Q-score: 0.358
Chen X, Qu X, Liu C, Zhang Y, Zhang G, Han P, Duan Y, Li Q, Wang L, Ruan W, Wang P, Wei W, Gao GF, Zhao X, Xie Z
Mbio (2022) 13 pp. e0116622-e0116622 [ Pubmed: 35862785 DOI: doi:10.1128/mbio.01166-22 ]
- Echovirus e18 (Virus from Echovirus E18)
- Vp3 (26 kDa, Protein from Echovirus E18)
- Palmitic acid (256 Da, Ligand)
- Vp4 (7 kDa, Protein from Echovirus E18)
- Vp2 (28 kDa, Protein from Echovirus E18)
- Vp1 (31 kDa, Protein from Echovirus E18)
Echo 18 incubated with FcRn at pH5.5
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 7xxj
Q-score: 0.491
Chen X, Qu X, Liu C, Zhang Y, Zhang G, Han P, Duan Y, Li Q, Wang L, Ruan W, Wang P, Wei W, Gao GF, Zhao X, Xie Z
Mbio (2022) 13 pp. e0116622-e0116622 [ Pubmed: 35862785 DOI: doi:10.1128/mbio.01166-22 ]
- Echovirus e18 (Virus from Echovirus E18)
- Vp3 (26 kDa, Protein from Echovirus E18)
- Palmitic acid (256 Da, Ligand)
- Vp1 (31 kDa, Protein from Echovirus E18)
- Vp4 (7 kDa, Protein from Echovirus E18)
- Vp2 (28 kDa, Protein from Echovirus E18)
Cryo-EM structure of Echovirus 6 complexed with its attachment receptor CD55 at PH 5.5
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6ilj
Q-score: 0.51
Zhao X, Zhang G, Liu S, Chen X, Peng R, Dai L, Qu X, Li S, Song H, Gao Z, Yuan P, Liu Z, Li C, Shang Z, Li Y, Zhang M, Qi J, Wang H, Du N, Wu Y, Bi Y, Gao S, Shi Y, Yan J, Zhang Y, Xie Z, Wei W, Gao GF
Cell (2019) 177 pp. 1553-1565.e16 [ Pubmed: 31104841 DOI: doi:10.1016/j.cell.2019.04.035 ]
- Cryo-em structure of echovirus 6 complexed with its attachment receptor cd55 at ph 5.5 (Complex from Echovirus E6)
- Capsid protein vp4 (7 kDa, Protein from Echovirus E6)
- Capsid protein vp1 (31 kDa, Protein from Echovirus E6)
- Capsid protein vp2 (28 kDa, Protein from Echovirus E6)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E6)
- Sphingosine (299 Da, Ligand)
- Complement decay-accelerating factor (21 kDa, Protein from Homo sapiens)
Cryo-EM structure of Echovirus 6 complexed with its attachment receptor CD55 at PH 7.4
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6ilk
Q-score: 0.586
Zhao X, Zhang G, Liu S, Chen X, Peng R, Dai L, Qu X, Li S, Song H, Gao Z, Yuan P, Liu Z, Li C, Shang Z, Li Y, Zhang M, Qi J, Wang H, Du N, Wu Y, Bi Y, Gao S, Shi Y, Yan J, Zhang Y, Xie Z, Wei W, Gao GF
Cell (2019) 177 pp. 1553-1565.e16 [ Pubmed: 31104841 DOI: doi:10.1016/j.cell.2019.04.035 ]
- Capsid protein vp1 (31 kDa, Protein from Echovirus E6)
- Capsid protein vp4 (7 kDa, Protein from Echovirus E6)
- Capsid protein vp2 (28 kDa, Protein from Echovirus E6)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E6)
- Sphingosine (299 Da, Ligand)
- Cryo-em structure of echovirus 6 complexed with its attachment receptor cd55 at ph 7.4 (Complex from Echovirus E6)
- Complement decay-accelerating factor (21 kDa, Protein from Homo sapiens)
Cryo-EM structure of Echovirus 6 complexed with its uncoating receptor FcRn at PH 5.5
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6ill
Q-score: 0.444
Zhao X, Zhang G, Liu S, Chen X, Peng R, Dai L, Qu X, Li S, Song H, Gao Z, Yuan P, Liu Z, Li C, Shang Z, Li Y, Zhang M, Qi J, Wang H, Du N, Wu Y, Bi Y, Gao S, Shi Y, Yan J, Zhang Y, Xie Z, Wei W, Gao GF
Cell (2019) 177 pp. 1553-1565.e16 [ DOI: doi:10.1016/j.cell.2019.04.035 Pubmed: 31104841 ]
- Cryo-em structure of echovirus 6 complexed with its uncoating receptor fcrn at ph 5.5 (Complex from Echovirus E6)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E6)
- Capsid protein vp4 (7 kDa, Protein from Echovirus E6)
- Capsid protein vp1 (31 kDa, Protein from Echovirus E6)
- Capsid protein vp2 (28 kDa, Protein from Echovirus E6)
Cryo-EM structure of Echovirus 6 complexed with its uncoating receptor FcRn at PH 7.4
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6ilm
Q-score: 0.456
Zhao X, Zhang G, Liu S, Chen X, Peng R, Dai L, Qu X, Li S, Song H, Gao Z, Yuan P, Liu Z, Li C, Shang Z, Li Y, Zhang M, Qi J, Wang H, Du N, Wu Y, Bi Y, Gao S, Shi Y, Yan J, Zhang Y, Xie Z, Wei W, Gao GF
Cell (2019) 177 pp. 1553-1565.e16 [ Pubmed: 31104841 DOI: doi:10.1016/j.cell.2019.04.035 ]
- Capsid protein vp1 (32 kDa, Protein from Echovirus E6)
- Beta-2-microglobulin (11 kDa, Protein from Homo sapiens)
- Capsid protein vp4 (7 kDa, Protein from Echovirus E6)
- Cryo-em structure of echovirus 6 complexed with its uncoating receptor fcrn at ph 7.4 (Complex from Echovirus E6)
- Sodium ion (22 Da, Ligand)
- Capsid protein vp2 (28 kDa, Protein from Echovirus E6)
- Igg receptor fcrn large subunit p51 (29 kDa, Protein from Homo sapiens)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E6)
- Sphingosine (299 Da, Ligand)
- Potassium ion (39 Da, Ligand)
Cryo-EM structure of full Echovirus 6 particle at PH 5.5
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6iln
Q-score: 0.541
Zhao X, Zhang G, Liu S, Chen X, Peng R, Dai L, Qu X, Li S, Song H, Gao Z, Yuan P, Liu Z, Li C, Shang Z, Li Y, Zhang M, Qi J, Wang H, Du N, Wu Y, Bi Y, Gao S, Shi Y, Yan J, Zhang Y, Xie Z, Wei W, Gao GF
Cell (2019) 177 pp. 1553-1565.e16 [ Pubmed: 31104841 DOI: doi:10.1016/j.cell.2019.04.035 ]
- Capsid protein vp1 (31 kDa, Protein from Echovirus E6)
- Capsid protein vp4 (7 kDa, Protein from Echovirus E6)
- Echovirus e6 (Virus from Echovirus E6)
- Capsid protein vp2 (28 kDa, Protein from Echovirus E6)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E6)
- Sphingosine (299 Da, Ligand)
Cryo-EM structure of empty Echovirus 6 particle at PH 7.4
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6ilo
Q-score: 0.552
Zhao X, Zhang G, Liu S, Chen X, Peng R, Dai L, Qu X, Li S, Song H, Gao Z, Yuan P, Liu Z, Li C, Shang Z, Li Y, Zhang M, Qi J, Wang H, Du N, Wu Y, Bi Y, Gao S, Shi Y, Yan J, Zhang Y, Xie Z, Wei W, Gao GF
Cell (2019) 177 pp. 1553-1565.e16 [ Pubmed: 31104841 DOI: doi:10.1016/j.cell.2019.04.035 ]
- Capsid protein vp2 (27 kDa, Protein from Echovirus E6)
- Capsid protein vp1 (26 kDa, Protein from Echovirus E6)
- Capsid protein vp3 (25 kDa, Protein from Echovirus E6)
- Echovirus e6 (Virus from Echovirus E6)
Cryo-EM structure of full Echovirus 6 particle at PH 7.4
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6ilp
Q-score: 0.606
Zhao X, Zhang G, Liu S, Chen X, Peng R, Dai L, Qu X, Li S, Song H, Gao Z, Yuan P, Liu Z, Li C, Shang Z, Li Y, Zhang M, Qi J, Wang H, Du N, Wu Y, Bi Y, Gao S, Shi Y, Yan J, Zhang Y, Xie Z, Wei W, Gao GF
Cell (2019) 177 pp. 1553-1565.e16 [ Pubmed: 31104841 DOI: doi:10.1016/j.cell.2019.04.035 ]
- Capsid protein vp2 (28 kDa, Protein from Echovirus E6)
- Capsid protein vp4 (7 kDa, Protein from Echovirus E6)
- Echovirus e6 (Virus from Echovirus E6)
- Capsid protein vp1 (31 kDa, Protein from Echovirus E6)
- Sphingosine (299 Da, Ligand)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E6)