Electron Microscopy Data Bank

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Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Release date: Oct. 4, 2023
Resolution: 5.72 Å
EM Method: Single-particle
Fitted PDBs: 8hl5
Q-score: 0.211

Wang YH, Dai H, Zhang L, Wu Y, Wang J, Wang C, Xu CH, Hou H, Yang B, Zhu Y, Zhang X, Zhou J

Nucleic Acids Res (2023) 51 pp. 8909-8924 [ Pubmed: 37604686 DOI: doi:10.1093/nar/gkad661 ]

Sample:

30s ribosomal protein s27ae (6 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s28e (7 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l39e (5 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l4 (27 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l30 (17 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l40e (6 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s7 (21 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s15 (17 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l23 (9 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s12 (15 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
Trna (76-mer) (24 kDa, RNA from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l14e (9 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l18ae (8 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l14 (14 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l15e (20 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l32e (14 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l7ae (13 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s13 (17 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s17e (7 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s19 (13 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l18 (21 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l21e (11 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s6e (11 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
5s rrna (122-mer) (39 kDa, RNA from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l30e (10 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l10e (18 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l19e (17 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s8 (14 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l44e (10 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l15 (16 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s4e (27 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s3ae (21 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
16s rrna (1493-mer) (487 kDa, RNA from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s2 (22 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
Sulfolobus acidocaldarius ribosome (Complex from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s17 (12 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s24e (10 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l6 (20 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
Duf2280 domain-containing protein (11 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l18e (12 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l24e (6 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l37e (6 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s4 (19 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
Conserved protein (8 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s14 type z (6 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l2 (24 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s19e (17 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l37ae (7 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l1 (24 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l31e (8 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l34e (8 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s5 (22 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s27e (6 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l3 (38 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l29 (7 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l47a (9 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l22 (17 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
23s rrna (2991-mer) (980 kDa, RNA from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s11 (13 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l5 (19 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l13 (15 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s8e (14 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s3 (22 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s10 (11 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
30s ribosomal protein s9 (15 kDa, Protein from Sulfolobus acidocaldarius DSM 639)
Unknown (103 Da, Ligand)
Mrna (5'-r(*up*up*up*up*up*u)-3') (1 kDa, RNA from Sulfolobus acidocaldarius DSM 639)
50s ribosomal protein l24 (14 kDa, Protein from Sulfolobus acidocaldarius DSM 639)

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