EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

primary_citation_author:"Yu X" AND release_date:[2023-01-01T00:00:00Z TO 2023-12-31T23:59:59Z] AND author_orcid:"0000-0001-8768-0982"

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

EMD-29454

Download Map 3D View

Structure of Covid Spike variant deltaN135 in fully closed form

Release date: April 5, 2023
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 8fu7
Q-score: 0.437

Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Melchers JM, van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs JM, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

PLoS Pathog (2023) 19 pp. e1011308-e1011308 [ DOI: doi:10.1371/journal.ppat.1011308 Pubmed: 37126534 ]

Sample:

Covid spike variant deltan135 (Complex from Severe acute respiratory syndrome coronavirus 2)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Spike glycoprotein (132 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)

EMD-29455

Download Map 3D View

Structure of Covid Spike variant deltaN135 with one erect RBD

Release date: April 5, 2023
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 8fu8
Q-score: 0.457

Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Melchers JM, van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs JM, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

PLoS Pathog (2023) 19 pp. e1011308-e1011308 [ DOI: doi:10.1371/journal.ppat.1011308 Pubmed: 37126534 ]

Sample:

Covid spike variant deltan135 (Complex from Severe acute respiratory syndrome coronavirus 2)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Spike glycoprotein (132 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)

EMD-29456

Download Map 3D View

Structure of Covid Spike variant deltaN25 with one erect RBD

Release date: April 5, 2023
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 8fu9
Q-score: 0.365

Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Melchers JM, van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs JM, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

PLoS Pathog (2023) 19 pp. e1011308-e1011308 [ DOI: doi:10.1371/journal.ppat.1011308 Pubmed: 37126534 ]

Sample:

Covid spike variant deltan25 (Complex from Severe acute respiratory syndrome coronavirus 2)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Spike glycoprotein (131 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: