Open-spiral pentamer of the substrate-free Lon protease with a Y224S mutation
Resolution: 3.68 Å
EM Method: Single-particle
Fitted PDBs: 7yph
Q-score: 0.186
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ DOI: doi:10.1038/s41467-023-43035-2 Pubmed: 37957149 ]
- Homo-pentameric complex of lon protease with atpgammas (440 kDa, Complex from Meiothermus taiwanensis)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
Spiral hexamer of the substrate-free Lon protease with a Y224S mutation
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7ypi
Q-score: 0.144
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ Pubmed: 37957149 DOI: doi:10.1038/s41467-023-43035-2 ]
- Homo-hexameric complex of lon protease with atpgammas (530 kDa, Complex from Meiothermus taiwanensis)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
Spiral pentamer of the substrate-free Lon protease with a S678A mutation
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7ypj
Q-score: 0.186
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ DOI: doi:10.1038/s41467-023-43035-2 Pubmed: 37957149 ]
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
- Substrate-free pentamer of mtalon-s678a (440 kDa, Complex from Meiothermus taiwanensis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
Close-ring hexamer of the substrate-bound Lon protease with an S678A mutation
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ypk
Q-score: 0.231
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ Pubmed: 37957149 DOI: doi:10.1038/s41467-023-43035-2 ]
- Alpha-s1-casein (1 kDa, Protein from Bos taurus)
- Close-ring hexamer of mtalon-s678a in a substrate-engaged state (530 kDa, Complex from Bos taurus)
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Alpha-s1-casein (Complex from Meiothermus taiwanensis)
- Close-ring hexamer of lon protease (Complex)
MtaLon-ADP for the spiral oligomers of tetramer
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7yuv
Q-score: 0.315
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ DOI: doi:10.1038/s41467-023-43035-2 Pubmed: 37957149 ]
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
- Mtalon-adp for the spiral oligomers of tetramer (400 kDa, Complex from Meiothermus taiwanensis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
MtaLon-ADP for the spiral oligomers of pentamer
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7yuw
Q-score: 0.283
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ Pubmed: 37957149 DOI: doi:10.1038/s41467-023-43035-2 ]
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Mtalon-adp for the spiral oligomers of pentamer (500 kDa, Complex from Meiothermus taiwanensis)
MtaLon-ADP for the spiral oligomers of hexamer
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7yux
Q-score: 0.265
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ DOI: doi:10.1038/s41467-023-43035-2 Pubmed: 37957149 ]
- Mtalon-apo for the spiral oligomers of hexamer (600 kDa, Complex from Meiothermus taiwanensis)
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
Resolution: 4.42 Å
EM Method: Single-particle
Fitted PDBs: 8k3y
Q-score: 0.139
Li S, Hsieh KY, Kuo CI, Lin TC, Lee SH, Chen YR, Wang CH, Ho MR, Ting SY, Zhang K, Chang CI
Nat Commun (2023) 14 pp. 7340-7340 [ Pubmed: 37957149 DOI: doi:10.1038/s41467-023-43035-2 ]
- Spiral pentamer of lon protease with a y224s mutation in complex with the n-terminal-truncated monomeric e613k mutant of lon. (Complex from Meiothermus taiwanensis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Lon protease (63 kDa, Protein from Meiothermus taiwanensis)
- Lon protease (89 kDa, Protein from Meiothermus taiwanensis)
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 7fd4
Q-score: 0.4
Li S, Hsieh KY, Kuo CI, Lee SH, Pintilie GD, Zhang K, Chang CI
Sci Adv (2021) 7 pp. eabj7835-eabj7835 [ Pubmed: 34652947 DOI: doi:10.1126/sciadv.abj7835 ]
- Alpha-s1-casein (1 kDa, Protein from Bos taurus)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Alpha-s1-casein (Complex)
- Lon protease (Complex from Bos taurus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- A complete three-dimensional structure of the lon protease translocating a protein substrate (conformation 1) (370 kDa, Complex from Meiothermus taiwanensis)
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
- N-[(1r)-1-(dihydroxyboranyl)-2-phenylethyl]-nalpha-(pyrazin-2-ylcarbonyl)-l-phenylalaninamide (418 Da, Ligand)
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 7fd5
Q-score: 0.397
Li S, Hsieh KY, Kuo CI, Lee SH, Pintilie GD, Zhang K, Chang CI
Sci Adv (2021) 7 pp. eabj7835-eabj7835 [ Pubmed: 34652947 DOI: doi:10.1126/sciadv.abj7835 ]
- Alpha-s1-casein (1 kDa, Protein from Bos taurus)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Alpha-s1-casein (Complex)
- Lon protease (Complex from Bos taurus)
- A complete three-dimensional structure of the lon protease translocating a protein substrate (conformation 2) (370 kDa, Complex from Meiothermus taiwanensis)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Lon protease (88 kDa, Protein from Meiothermus taiwanensis)
- N-[(1r)-1-(dihydroxyboranyl)-2-phenylethyl]-nalpha-(pyrazin-2-ylcarbonyl)-l-phenylalaninamide (418 Da, Ligand)