Electron Microscopy Data Bank

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Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 1 (OA-1)

Release date: March 27, 2019
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6nyf
Q-score: 0.437

Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W

PNAS (2019) 116 pp. 6800-6805 [ DOI: doi:10.1073/pnas.1821959116 Pubmed: 30894496 ]

Sample:

Vacuolating cytotoxin autotransporter (88 kDa, Protein from Campylobacter pylori)
Helicobacter pylori vacuolating cytotoxin a oligomeric assembly 1 (oa-1) (88 kDa, Complex from Helicobacter pylori)

EMD-0543

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Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2a (OA-2a)

Release date: March 27, 2019
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6nyg
Q-score: 0.28

Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W

PNAS (2019) 116 pp. 6800-6805 [ DOI: doi:10.1073/pnas.1821959116 Pubmed: 30894496 ]

Sample:

Vacuolating cytotoxin autotransporter (88 kDa, Protein from Campylobacter pylori)
Helicobacter pylori vacuolating cytotoxin a oligomeric assembly 2a (oa-2a) (88 kDa, Complex from Helicobacter pylori)

EMD-0544

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Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2b (OA-2b)

Release date: March 27, 2019
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6nyj
Q-score: 0.411

Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W

PNAS (2019) 116 pp. 6800-6805 [ DOI: doi:10.1073/pnas.1821959116 Pubmed: 30894496 ]

Sample:

Vacuolating cytotoxin autotransporter (88 kDa, Protein from Campylobacter pylori)
Helicobacter pylori vacuolating cytotoxin a oligomeric assembly 2b (oa-2b) (88 kDa, Complex from Helicobacter pylori)

EMD-0545

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Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2c (OA-2c)

Release date: March 27, 2019
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6nyl
Q-score: 0.33

Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W

PNAS (2019) 116 pp. 6800-6805 [ DOI: doi:10.1073/pnas.1821959116 Pubmed: 30894496 ]

Sample:

Vacuolating cytotoxin autotransporter (88 kDa, Protein from Campylobacter pylori)
Helicobacter pylori vacuolating cytotoxin a oligomeric assembly 2c (oa-2c) (88 kDa, Complex from Helicobacter pylori)

EMD-0546

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Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2d (OA-2d)

Release date: March 27, 2019
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6nym
Q-score: 0.362

Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W

PNAS (2019) 116 pp. 6800-6805 [ DOI: doi:10.1073/pnas.1821959116 Pubmed: 30894496 ]

Sample:

Vacuolating cytotoxin autotransporter (88 kDa, Protein from Campylobacter pylori)
Helicobacter pylori vacuolating cytotoxin a oligomeric assembly 2d (oa-2d) (88 kDa, Complex from Helicobacter pylori)

EMD-0547

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Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2e (OA-2e)

Release date: March 27, 2019
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6nyn
Q-score: 0.376

Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W

PNAS (2019) 116 pp. 6800-6805 [ Pubmed: 30894496 DOI: doi:10.1073/pnas.1821959116 ]

Sample:

Helicobacter pylori vacuolating cytotoxin a oligomeric assembly 2e (oa-2e) (88 kDa, Complex from Helicobacter pylori)
Vacuolating cytotoxin autotransporter (88 kDa, Protein from Campylobacter pylori)

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