Cryo-EM structure of CopC-CaM-caspase-3 with NAD+
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 7xn4
Q-score: 0.492
Zhang K, Peng T, Tao X, Tian M, Li Y, Wang Z, Ma S, Hu S, Pan X, Xue J, Luo J, Wu Q, Fu Y, Li S
Mol Cell (2022) 82 pp. 4712-4726.e7 [ Pubmed: 36423631 DOI: doi:10.1016/j.molcel.2022.10.032 ]
- Arginine adp-riboxanase copc (52 kDa, Protein from Chromobacterium violaceum)
- Caspase-3 (31 kDa, Protein from Homo sapiens)
- Cryo-em structure of copc-cam-caspase-3 with nad+ (Complex from Homo sapiens)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
Cryo-EM structure of CopC-CaM-caspase-3 with ADPR
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 7xn5
Q-score: 0.517
Zhang K, Peng T, Tao X, Tian M, Li Y, Wang Z, Ma S, Hu S, Pan X, Xue J, Luo J, Wu Q, Fu Y, Li S
Mol Cell (2022) 82 pp. 4712-4726.e7 [ DOI: doi:10.1016/j.molcel.2022.10.032 Pubmed: 36423631 ]
- Cryo-em structure of copc-cam-caspase-3 with adpr (Complex from Homo sapiens)
- Nicotinamide (122 Da, Ligand)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Adenosine-5-diphosphoribose (559 Da, Ligand)
- Arginine adp-riboxanase copc (52 kDa, Protein from Chromobacterium violaceum)
- Caspase-3 (31 kDa, Protein from Homo sapiens)
Cryo-EM structure of CopC-CaM-caspase-3 with ADPR-deacylization
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7xn6
Q-score: 0.466
Zhang K, Peng T, Tao X, Tian M, Li Y, Wang Z, Ma S, Hu S, Pan X, Xue J, Luo J, Wu Q, Fu Y, Li S
Mol Cell (2022) 82 pp. 4712-4726.e7 [ Pubmed: 36423631 DOI: doi:10.1016/j.molcel.2022.10.032 ]
- Arginine adp-riboxanase copc (52 kDa, Protein from Chromobacterium violaceum)
- Nicotinamide (122 Da, Ligand)
- Cryo-em structure of copc-cam-caspase-3 with adpr-deacylization (Complex from Homo sapiens)
- Caspase-3 (31 kDa, Protein from Homo sapiens)
- Adenosine-5-diphosphoribose (559 Da, Ligand)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
Cryo-EM structure of PEIP-Bs_enolase complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7xml
Q-score: 0.468
Zhang K, Li S, Wang Y, Wang Z, Mulvenna N, Yang H, Zhang P, Chen H, Li Y, Wang H, Gao Y, Wigneshweraraj S, Matthews S, Zhang K, Liu B
Cell Rep (2022) 40 pp. 111026-111026 [ Pubmed: 35793626 DOI: doi:10.1016/j.celrep.2022.111026 ]
- Peip (Complex from Bacillus phage SP01)
- Peip-bs_enolase complex (100 kDa, Complex)
- Bs_enolase (Complex from Bacillus subtilis (strain 168))
- Putative gene 60 protein (8 kDa, Protein from Bacillus phage SP01)
- Magnesium ion (24 Da, Ligand)
- Enolase (46 kDa, Protein from Bacillus subtilis (strain 168))
Cryo-EM structure of the Gp168-beta-clamp complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7evp
Q-score: 0.489
Liu B, Li S, Liu Y, Chen H, Hu Z, Wang Z, Zhao Y, Zhang L, Ma B, Wang H, Matthews S, Wang Y, Zhang K
Nucleic Acids Res (2021) 49 pp. 11367-11378 [ DOI: doi:10.1093/nar/gkab875 Pubmed: 34614154 ]
- Gp168-beta-clamp complex (100 kDa, Complex)
- Sliding clamp inhibitor (8 kDa, Protein from Staphylococcus virus Twort)
- Gp168 (Complex from Staphylococcus virus Twort)
- Beta sliding clamp (41 kDa, Protein from Staphylococcus aureus)
- Beta sliding clamp 2 (Complex from Staphylococcus aureus)