Cryo-EM structure of CopC-CaM-caspase-3 with NAD+
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 7xn4
Q-score: 0.492
Zhang K, Peng T, Tao X, Tian M, Li Y, Wang Z, Ma S, Hu S, Pan X, Xue J, Luo J, Wu Q, Fu Y, Li S
Mol Cell (2022) 82 pp. 4712-4726.e7 [ DOI: doi:10.1016/j.molcel.2022.10.032 Pubmed: 36423631 ]
- Arginine adp-riboxanase copc (52 kDa, Protein from Chromobacterium violaceum)
- Caspase-3 (31 kDa, Protein from Homo sapiens)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Cryo-em structure of copc-cam-caspase-3 with nad+ (Complex from Homo sapiens)
Cryo-EM structure of CopC-CaM-caspase-3 with ADPR
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 7xn5
Q-score: 0.517
Zhang K, Peng T, Tao X, Tian M, Li Y, Wang Z, Ma S, Hu S, Pan X, Xue J, Luo J, Wu Q, Fu Y, Li S
Mol Cell (2022) 82 pp. 4712-4726.e7 [ DOI: doi:10.1016/j.molcel.2022.10.032 Pubmed: 36423631 ]
- Arginine adp-riboxanase copc (52 kDa, Protein from Chromobacterium violaceum)
- Adenosine-5-diphosphoribose (559 Da, Ligand)
- Nicotinamide (122 Da, Ligand)
- Caspase-3 (31 kDa, Protein from Homo sapiens)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Cryo-em structure of copc-cam-caspase-3 with adpr (Complex from Homo sapiens)
Cryo-EM structure of CopC-CaM-caspase-3 with ADPR-deacylization
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7xn6
Q-score: 0.466
Zhang K, Peng T, Tao X, Tian M, Li Y, Wang Z, Ma S, Hu S, Pan X, Xue J, Luo J, Wu Q, Fu Y, Li S
Mol Cell (2022) 82 pp. 4712-4726.e7 [ DOI: doi:10.1016/j.molcel.2022.10.032 Pubmed: 36423631 ]
- Arginine adp-riboxanase copc (52 kDa, Protein from Chromobacterium violaceum)
- Caspase-3 (32 kDa, Protein from Homo sapiens)
- Nicotinamide (122 Da, Ligand)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
- Cryo-em structure of copc-cam-caspase-3 with adpr-deacylization (Complex from Homo sapiens)
Human Drosha and DGCR8 in complex with Primary MicroRNA (MP/RNA complex) - Active state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6v5b
Q-score: 0.337
Partin AC, Zhang K, Jeong BC, Herrell E, Li S, Chiu W, Nam Y
Mol Cell (2020) 78 pp. 411- [ Pubmed: 32220646 DOI: doi:10.1016/j.molcel.2020.02.016 ]
- Human drosha and dgcr8 in complex with primary microrna (mp/rna complex) - active state (40 kDa, Complex from Homo sapiens)
- Ribonuclease 3 (118 kDa, Protein from Homo sapiens)
- Microprocessor complex subunit dgcr8 (60 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Pri-mir-16-2 (78-mer) (33 kDa, RNA from Homo sapiens)
Human Drosha and DGCR8 in complex with Primary MicroRNA (MP/RNA complex) - partially docked state
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6v5c
Q-score: 0.294
Partin AC, Zhang K, Jeong BC, Herrell E, Li S, Chiu W, Nam Y
Mol Cell (2020) 78 pp. 411- [ DOI: doi:10.1016/j.molcel.2020.02.016 Pubmed: 32220646 ]
- Ribonuclease 3 (118 kDa, Protein from Homo sapiens)
- Microprocessor complex subunit dgcr8 (60 kDa, Protein from Homo sapiens)
- Pri-mir-16-2 (66-mer) (33 kDa, RNA from Homo sapiens)
- Human drosha and dgcr8 in complex with primary microrna (mp/rna complex) - partially docked state (40 kDa, Complex from Homo sapiens)