Cryo-EM structure of SARS-CoV-2 Alpha (B.1.1.7) spike protein
Resolution: 2.56 Å
EM Method: Single-particle
Fitted PDBs: 8dli
Q-score: 0.4
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
Cryo-EM structure of SARS-CoV-2 Alpha (B.1.1.7) spike protein in complex with human ACE2
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 8dlj
Q-score: 0.353
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 alpha (b.1.1.7) spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (70 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Sars-cov-2 alpha (b.1.1.7) spike protein in complex with human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 8dlk
Q-score: 0.464
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 alpha (b.1.1.7) spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (70 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Sars-cov-2 alpha (b.1.1.7) spike protein in complex with human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of SARS-CoV-2 Beta (B.1.351) spike protein
Resolution: 2.56 Å
EM Method: Single-particle
Fitted PDBs: 8dll
Q-score: 0.404
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
Cryo-EM structure of SARS-CoV-2 Beta (B.1.351) spike protein in complex with human ACE2
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8dlm
Q-score: 0.335
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 beta (b.1.351) spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (70 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Sars-cov-2 beta (b.1.351) spike protein in complex with human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 8dln
Q-score: 0.471
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 beta (b.1.351) spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (70 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Sars-cov-2 beta (b.1.351) spike protein in complex with human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 8dlo
Q-score: 0.472
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with human ACE2
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8dlp
Q-score: 0.267
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Processed angiotensin-converting enzyme 2 (70 kDa, Protein from Homo sapiens)
- Sars-cov-2 gamma (p.1) spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 gamma (p.1) spike protein in complex with human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
Resolution: 2.77 Å
EM Method: Single-particle
Fitted PDBs: 8dlq
Q-score: 0.518
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Processed angiotensin-converting enzyme 2 (70 kDa, Protein from Homo sapiens)
- Sars-cov-2 gamma (p.1) spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 gamma (p.1) spike protein in complex with human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with Fab 4-8
Mannar D, Saville JW, Sun Z, Zhu X, Marti MM, Srivastava SS, Berezuk AM, Zhou S, Tuttle KS, Sobolewski MD, Kim A, Treat BR, Da Silva Castanha PM, Jacobs JL, Barratt-Boyes SM, Mellors JW, Dimitrov DS, Li W, Subramaniam S
Nat Commun (2022) 13 pp. 4696-4696 [ Pubmed: 35982054 DOI: doi:10.1038/s41467-022-32262-8 ]
- Sars-cov-2 gamma (p.1) spike protein in complex with fab 4-8 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab 4-8 heavy chain (Protein from Homo sapiens)
- Sars-cov-2 gamma (p.1) spike protein (Protein from Severe acute respiratory syndrome coronavirus 2)
- Fab 4-8 (Complex from Homo sapiens)
- Sars-cov-2 gamma (p.1) spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab 4-8 light chain (Protein from Homo sapiens)