EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate"

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EMDB [3]

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EMD-33154

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structure of a membrane-bound glycosyltransferase

Release date: March 29, 2023
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7xe4
Q-score: 0.471

Hu X, Yang P, Chai C, Liu J, Sun H, Wu Y, Zhang M, Zhang M, Liu X, Yu H

Nature (2023) 616 pp. 190-198 [ Pubmed: 36949198 DOI: doi:10.1038/s41586-023-05856-5 ]

Sample:

1,3-beta-glucan synthase component fks1 (215 kDa, Protein from baker's yeast)
Heptane (100 Da, Ligand)
Dodecane (170 Da, Ligand)
(11r,14s)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate (495 Da, Ligand)
Tetradecane (198 Da, Ligand)
Membrane-bound glycosyltransferase (215 kDa, Complex from Saccharomyces cerevisiae)
Nonane (128 Da, Ligand)
Decane (142 Da, Ligand)

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EMD-34115

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Structure of a mutated membrane-bound glycosyltransferase

Release date: March 29, 2023
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7yuy
Q-score: 0.494

Hu X, Yang P, Chai C, Liu J, Sun H, Wu Y, Zhang M, Zhang M, Liu X, Yu H

Nature (2023) 616 pp. 190-198 [ Pubmed: 36949198 DOI: doi:10.1038/s41586-023-05856-5 ]

Sample:

Membrane-bound glycosyltransferase (215 kDa, Complex from Saccharomyces cerevisiae)
Dodecane (170 Da, Ligand)
Decane (142 Da, Ligand)
Heptane (100 Da, Ligand)
1,3-beta-glucan synthase component fks1 (215 kDa, Protein from Saccharomyces cerevisiae)
Nonane (128 Da, Ligand)
Tetradecane (198 Da, Ligand)
(11r,14s)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate (495 Da, Ligand)

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EMD-23141

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cryo-EM structure of DkTx-bound minimal TRPV1 in open state

Release date: Sept. 22, 2021
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 7l2u
Q-score: 0.47

Zhang K, Julius D, Cheng Y

Cell (2021) 184 pp. 5138-5150.e12 [ DOI: doi:10.1016/j.cell.2021.08.012 Pubmed: 34496225 ]

Sample:

(2s)-1-(butanoyloxy)-3-{[(r)-hydroxy{[(1r,2r,3s,4s,5r,6s)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate (600 Da, Ligand)
Minimal trpv1 in nanodisc (Complex from Rattus norvegicus)
Sodium ion (22 Da, Ligand)
(11r,14s)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate (495 Da, Ligand)
Tau-theraphotoxin-hs1a (8 kDa, Protein from Cyriopagopus schmidti)
Transient receptor potential cation channel subfamily v member 1 (73 kDa, Protein from Rattus norvegicus)
Water (18 Da, Ligand)

[Show more]

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: