Edit your search query here and hit Return to execute it:
sample_name:"23S Ribosomal RNA" AND sample_type:"ligand" AND author_name:"Kirby JE"
A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
Release date: April 19, 2023
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7uvv
Q-score: 0.61
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7uvv
Q-score: 0.61
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
Sample:
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- Sf-70s ribosome complex with p-site trna (Complex from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- Streptothricin f (502 Da, Ligand)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
A. baumannii ribosome: 70S with E-site tRNA
Release date: April 19, 2023
Resolution: 2.37 Å
EM Method: Single-particle
Fitted PDBs: 7uvw
Q-score: 0.617
Resolution: 2.37 Å
EM Method: Single-particle
Fitted PDBs: 7uvw
Q-score: 0.617
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
Sample:
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- A. baumannii 70s ribosome with e-site trna (Complex from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
A. baumannii 70S ribosome-Streptothricin-F complex
Release date: April 19, 2023
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 7uvx
Q-score: 0.618
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 7uvx
Q-score: 0.618
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
Sample:
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- Streptothricin f (502 Da, Ligand)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- Sf-70s ribosome complex (Complex from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
Release date: April 19, 2023
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 7uvy
Q-score: 0.622
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 7uvy
Q-score: 0.622
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
Sample:
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- Sd-70s ribosome complex with p-site trna (Complex from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Streptothricin d (758 Da, Ligand)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- Water (18 Da, Ligand)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
Release date: April 19, 2023
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7uvz
Q-score: 0.637
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7uvz
Q-score: 0.637
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
Sample:
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- Sd-70s ribosome complex with e-site trna (Complex from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Streptothricin d (758 Da, Ligand)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- Water (18 Da, Ligand)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
A. baumannii 70S ribosome-Streptothricin-D complex
Release date: April 19, 2023
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7uw1
Q-score: 0.639
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7uw1
Q-score: 0.639
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
Sample:
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- Sd-70s ribosome complex (Complex from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Streptothricin d (758 Da, Ligand)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- Water (18 Da, Ligand)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
Release date: Feb. 5, 2020
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 6v39
Q-score: 0.484
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 6v39
Q-score: 0.484
Morgan CE, Huang W, Rudin SD, Taylor DJ, Kirby JE, Bonomo RA, Yu EW
Mbio (2020) 11 [ DOI: doi:10.1128/mBio.03117-19 Pubmed: 31964740 ]
Sample:
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter sp. ANC 4470)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- N-formylmethionine (177 Da, Ligand)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Sodium ion (22 Da, Ligand)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter sp. CIP 102082)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter sp. CIP 51.11)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter sp. 263903-1)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter sp. 263903-1)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter sp. NIPH 899)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Mrna 5'-aug-3' (935 Da, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Water (18 Da, Ligand)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter sp. 809848)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter rudis CIP 110305)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter venetianus)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter beijerinckii ANC 3835)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter sp. ANC 5600)
- Acinetobacter baumannii 70s ribosome with p-site trna (2 MDa, Complex from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Release date: Feb. 5, 2020
Resolution: 2.82 Å
EM Method: Single-particle
Fitted PDBs: 6v3a
Q-score: 0.531
Resolution: 2.82 Å
EM Method: Single-particle
Fitted PDBs: 6v3a
Q-score: 0.531
Morgan CE, Huang W, Rudin SD, Taylor DJ, Kirby JE, Bonomo RA, Yu EW
Mbio (2020) 11 [ Pubmed: 31964740 DOI: doi:10.1128/mBio.03117-19 ]
Sample:
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter sp. CIP 102082)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter sp. 263903-1)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter sp. ANC 4470)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter sp. 263903-1)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Water (18 Da, Ligand)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter sp. 809848)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter sp. CIP 51.11)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Zinc ion (65 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter venetianus)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter sp. NIPH 899)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter sp. ANC 5600)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii)
- Acinetobacter baumannii 70s ribosome with e-site trna bound (2 MDa, Complex from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter beijerinckii ANC 3835)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter rudis CIP 110305)
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state
Release date: Feb. 5, 2020
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 6v3b
Q-score: 0.515
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 6v3b
Q-score: 0.515
Morgan CE, Huang W, Rudin SD, Taylor DJ, Kirby JE, Bonomo RA, Yu EW
Mbio (2020) 11 [ DOI: doi:10.1128/mBio.03117-19 Pubmed: 31964740 ]
Sample:
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter sp. ANC 4470)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Sodium ion (22 Da, Ligand)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter sp. CIP 102082)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter sp. CIP 51.11)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter sp. 263903-1)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter sp. 263903-1)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter sp. NIPH 899)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Water (18 Da, Ligand)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter sp. 809848)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter rudis CIP 110305)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter venetianus)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter beijerinckii ANC 3835)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Acinetobacter baumannii 70s ribosome with no trna bound (2 MDa, Complex from Acinetobacter baumannii AB0057)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter sp. ANC 5600)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit
Release date: Feb. 5, 2020
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 6v3d
Q-score: 0.493
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 6v3d
Q-score: 0.493
Morgan CE, Huang W, Rudin SD, Taylor DJ, Kirby JE, Bonomo RA, Yu EW
Mbio (2020) 11 [ DOI: doi:10.1128/mBio.03117-19 Pubmed: 31964740 ]
Sample:
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Acinetobacter baumannii large ribosomal subunit (2 MDa, Complex from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter sp. 809848)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Sodium ion (22 Da, Ligand)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter sp. NIPH 899)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter rudis CIP 110305)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter sp. CIP 51.11)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter sp. ANC 4470)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Water (18 Da, Ligand)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter beijerinckii ANC 3835)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter sp. CIP 102082)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii (strain AB0057))