Edit your search query here and hit Return to execute it:
sample_name:"23S Ribosomal RNA" AND sample_type:"ligand" AND release_date:[2022-01-01T00:00:00Z TO 2022-12-31T23:59:59Z]
Release date: Dec. 7, 2022
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8ekc
Q-score: 0.553
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8ekc
Q-score: 0.553
Paranjpe MN, Marina VI, Grachev AA, Maviza TP, Tolicheva OA, Paleskava A, Osterman IA, Sergiev PV, Konevega AL, Polikanov YS, Gagnon MG
Nucleic Acids Res (2023) 51 pp. 449-462 [ Pubmed: 36546783 DOI: doi:10.1093/nar/gkac1189 ]
Sample:
- 16s ribosomal rna (499 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- A-site phenylalanine trna (24 kDa, RNA from Escherichia coli)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- M-f-stop mrna (7 kDa, RNA from Escherichia phage T4)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- Escherichia coli 70s ribosome bound to thermorubin, deacylated p-site trnafmet and aminoacylated a-site phe-trna (2 MDa, Complex from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- P-site initiator trna (24 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- Phenylalanine (165 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- Thermorubin (600 Da, Ligand)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- Ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s7 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
Release date: Nov. 2, 2022
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8a57
Q-score: 0.579
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8a57
Q-score: 0.579
Koller TO, Turnbull KJ, Vaitkevicius K, Crowe-McAuliffe C, Roghanian M, Bulvas O, Nakamoto JA, Kurata T, Julius C, Atkinson GC, Johansson J, Hauryliuk V, Wilson DN
Nucleic Acids Res (2022) 50 pp. 11285-11300 [ Pubmed: 36300626 DOI: doi:10.1093/nar/gkac934 ]
Sample:
- 50s ribosomal protein l3 (22 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l23 (10 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l34 (5 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l28 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 50s ribosomal protein l36 (4 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l31 type b (9 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l5 (20 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l2 (30 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l33 1 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l13 (16 kDa, Protein from Listeria monocytogenes EGD-e)
- Potassium ion (39 Da, Ligand)
- 50s ribosomal protein l35 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l27 (10 kDa, Protein from Listeria monocytogenes EGD-e)
- Zinc ion (65 Da, Ligand)
- 1,4-diaminobutane (88 Da, Ligand)
- Spermidine (145 Da, Ligand)
- 50s ribosomal protein l6 (19 kDa, Protein from Listeria monocytogenes EGD-e)
- Gtpase hflx (47 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l30 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l17 (15 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l24 (11 kDa, Protein from Listeria monocytogenes EGD-e)
- Hflxr bound to the listeria monocytogenes 50s ribosomal subunit (1 MDa, Complex from Listeria monocytogenes E)
- 50s ribosomal protein l4 (22 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l21 (11 kDa, Protein from Listeria monocytogenes EGD-e)
- Magnesium ion (24 Da, Ligand)
- 23s ribosomal rna (950 kDa, RNA from Listeria monocytogenes EGD-e)
- 5s ribosomal rna (36 kDa, RNA from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l19 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l22 (12 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l32-2 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l11 (14 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l20 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l16 (16 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l15 (15 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l29 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l14 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l18 (13 kDa, Protein from Listeria monocytogenes EGD-e)
Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
Release date: Nov. 2, 2022
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8a5i
Q-score: 0.638
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8a5i
Q-score: 0.638
Koller TO, Turnbull KJ, Vaitkevicius K, Crowe-McAuliffe C, Roghanian M, Bulvas O, Nakamoto JA, Kurata T, Julius C, Atkinson GC, Johansson J, Hauryliuk V, Wilson DN
Nucleic Acids Res (2022) 50 pp. 11285-11300 [ Pubmed: 36300626 DOI: doi:10.1093/nar/gkac934 ]
Sample:
- Lincomycin (406 Da, Ligand)
- 50s ribosomal protein l27 (10 kDa, Protein from Listeria monocytogenes EGD-e)
- Potassium ion (39 Da, Ligand)
- 50s ribosomal protein l3 (22 kDa, Protein from Listeria monocytogenes EGD-e)
- 23s ribosomal rna (950 kDa, RNA from Listeria monocytogenes EGD-e)
- 1,4-diaminobutane (88 Da, Ligand)
- 50s ribosomal protein l36 (4 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l15 (15 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l23 (10 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l29 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l4 (22 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l31 type b (9 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l18 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l6 (19 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l34 (5 kDa, Protein from Listeria monocytogenes EGD-e)
- Magnesium ion (24 Da, Ligand)
- Spermidine (145 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l13 (16 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l32-2 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l17 (15 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l5 (20 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l22 (12 kDa, Protein from Listeria monocytogenes EGD-e)
- 5s ribosomal rna (36 kDa, RNA from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l20 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l35 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- Lincomycin bound to the listeria monocytogenes 50s ribosomal subunit. (1 MDa, Complex from Listeria monocytogenes E)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l19 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l28 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l14 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l21 (11 kDa, Protein from Listeria monocytogenes EGD-e)
- Water (18 Da, Ligand)
- 50s ribosomal protein l30 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l16 (16 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l33 1 (6 kDa, Protein from Listeria monocytogenes EGD-e)
Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.
Release date: Nov. 2, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8a63
Q-score: 0.503
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8a63
Q-score: 0.503
Koller TO, Turnbull KJ, Vaitkevicius K, Crowe-McAuliffe C, Roghanian M, Bulvas O, Nakamoto JA, Kurata T, Julius C, Atkinson GC, Johansson J, Hauryliuk V, Wilson DN
Nucleic Acids Res (2022) 50 pp. 11285-11300 [ Pubmed: 36300626 DOI: doi:10.1093/nar/gkac934 ]
Sample:
- 50s ribosomal protein l3 (22 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l23 (10 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l34 (5 kDa, Protein from Listeria monocytogenes EGD-e)
- Listeria monocytogenes 50s ribosomal subunit. (1 MDa, Complex from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l28 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l36 (4 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l31 type b (9 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l5 (20 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l2 (30 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l33 1 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l13 (16 kDa, Protein from Listeria monocytogenes EGD-e)
- Potassium ion (39 Da, Ligand)
- 50s ribosomal protein l35 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l27 (10 kDa, Protein from Listeria monocytogenes EGD-e)
- Zinc ion (65 Da, Ligand)
- 1,4-diaminobutane (88 Da, Ligand)
- Spermidine (145 Da, Ligand)
- 50s ribosomal protein l6 (19 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l30 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l17 (15 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l24 (11 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l4 (22 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l21 (11 kDa, Protein from Listeria monocytogenes EGD-e)
- Magnesium ion (24 Da, Ligand)
- 23s ribosomal rna (950 kDa, RNA from Listeria monocytogenes EGD-e)
- 5s ribosomal rna (36 kDa, RNA from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l19 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l22 (12 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l32-2 (6 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l20 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l16 (16 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l15 (15 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l29 (7 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l14 (13 kDa, Protein from Listeria monocytogenes EGD-e)
- 50s ribosomal protein l18 (13 kDa, Protein from Listeria monocytogenes EGD-e)
Release date: Oct. 19, 2022
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7m5d
Q-score: 0.526
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7m5d
Q-score: 0.526
To Be Published
Sample:
- Peptide chain release factor 1 (40 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l10 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- E.coli 70s ribosome in complex with rf3-gtp, rf1 and p-trna (state i) (Complex from Escherichia coli)
- 30s ribosomal protein s2 (25 kDa, Protein from Escherichia coli)
- P-trna (24 kDa, RNA from Escherichia coli)
- 16s ribosomal rna (497 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- Mrna (4 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- Peptide chain release factor 3 (58 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- Cryo-em structure of a non-rotated e.coli 70s ribosome in complex with rf3-gtp, rf1 and p-trna (state i) (Complex)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli)
- Mrna (Complex from Escherichia coli)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- Fme-phe-phe (471 Da, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
Damaged 70S ribosome with PrfH bound
Release date: Aug. 3, 2022
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 7sa4
Q-score: 0.61
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 7sa4
Q-score: 0.61
Tian Y, Zeng F, Raybarman A, Fatma S, Carruthers A, Li Q, Huang RH
PNAS (2022) 119 pp. e2202464119-e2202464119 [ Pubmed: 35858322 DOI: doi:10.1073/pnas.2202464119 ]
Sample:
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- Putative peptide chain release factor homolog (Cellular component)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- Trna (Cellular component)
- 50s (Complex)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 30s (Complex)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l10 (17 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- P-trna, e-trna (24 kDa, RNA from Escherichia coli)
- Mrna (8 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- Damaged 70s with prfh (Complex from Escherichia coli)
- 16s ribosomal rna (497 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- Peptide chain release factor h (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
Release date: June 22, 2022
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7unr
Q-score: 0.561
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7unr
Q-score: 0.561
Basu RS, Sherman MB, Gagnon MG
Nat Commun (2022) 13 pp. 3388- [ DOI: doi:10.1038/s41467-022-31129-2 ]
Sample:
- 30s ribosomal protein s21 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s2 (27 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Translation initiation factor if-2 (91 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l4 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l34 (5 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s5 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l23 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Pseudomonas aeruginosa 70s ribosome initiation complex bound to compact if2-gdp (composite structure i-a) (Complex from Pseudomonas aeruginosa PAO1)
- 16s ribosomal rna (497 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s9 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l6 (19 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Water (18 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Mrna (7 kDa, RNA from Bacteriophage sp.)
- 23s ribosomal rna (937 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l33 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l32 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s15 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l16 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s7 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s12 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s16 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l36 (4 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l11 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l14 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s10 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l35 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l17 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- N-formylmethionine (177 Da, Ligand)
- 50s ribosomal protein l28 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s19 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s6 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l9 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l19 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l13 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s11 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l29 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l18 (12 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s8 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l5 (20 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l25 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l20 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 5s ribosomal rna (38 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s4 (23 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s13 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l21 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 50s ribosomal protein l30 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s3 (25 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s17 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l3 (22 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l2 (29 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s14 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l27 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l31 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- P-site initiator trna (24 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l22 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s18 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s20 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l15 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l10 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
Release date: June 22, 2022
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7unu
Q-score: 0.577
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7unu
Q-score: 0.577
Basu RS, Sherman MB, Gagnon MG
Nat Commun (2022) 13 pp. 3388- [ DOI: doi:10.1038/s41467-022-31129-2 ]
Sample:
- 30s ribosomal protein s21 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s2 (27 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Pseudomonas aeruginosa 70s ribosome initiation complex bound to compact if2-gdp (composite structure i-b) (Complex from Pseudomonas aeruginosa PAO1)
- Translation initiation factor if-2 (91 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l4 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l34 (5 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s5 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l23 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 16s ribosomal rna (497 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s9 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l6 (19 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Water (18 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Mrna (7 kDa, RNA from Bacteriophage sp.)
- 23s ribosomal rna (937 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l33 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l32 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s15 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l16 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s7 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s12 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s16 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l36 (4 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l11 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l14 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s10 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l35 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l17 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- N-formylmethionine (177 Da, Ligand)
- 50s ribosomal protein l28 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s19 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s6 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l9 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l19 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l13 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s11 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l29 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l18 (12 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s8 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l5 (20 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l25 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l20 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 5s ribosomal rna (38 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s4 (23 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s13 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l21 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 50s ribosomal protein l30 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s3 (25 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s17 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l3 (22 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l2 (29 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s14 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l27 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l31 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- P-site initiator trna (24 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l22 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s18 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s20 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l15 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l10 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
Release date: June 22, 2022
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7unv
Q-score: 0.554
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7unv
Q-score: 0.554
Basu RS, Sherman MB, Gagnon MG
Nat Commun (2022) 13 pp. 3388- [ DOI: doi:10.1038/s41467-022-31129-2 ]
Sample:
- 30s ribosomal protein s10 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l36 (4 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s14 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l31 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l15 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Mrna (7 kDa, RNA from Bacteriophage sp.)
- 30s ribosomal protein s21 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s6 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l32 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s3 (25 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l28 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s17 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s9 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l34 (5 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Pseudomonas aeruginosa 70s ribosome initiation complex bound to if2-gdpcp (structure ii-a) (Complex from Pseudomonas aeruginosa PAO1)
- N-formylmethionine (177 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s8 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (29 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l23 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l19 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l29 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l13 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Translation initiation factor if-2 (91 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- 30s ribosomal protein s13 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 16s ribosomal rna (497 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s20 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l6 (19 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s19 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s7 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l4 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l10 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l11 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- P-site initiator trna (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s2 (27 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s15 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s18 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l3 (22 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l18 (12 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s12 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l9 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l24 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 23s ribosomal rna (937 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l27 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s16 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l16 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l35 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l22 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Water (18 Da, Ligand)
- 30s ribosomal protein s11 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l25 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l33 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l14 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l30 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l21 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l17 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l20 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 5s ribosomal rna (38 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l5 (20 kDa, Protein from Pseudomonas aeruginosa PAO1)
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Release date: June 22, 2022
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7unw
Q-score: 0.554
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7unw
Q-score: 0.554
Basu RS, Sherman MB, Gagnon MG
Nat Commun (2022) 13 pp. 3388- [ DOI: doi:10.1038/s41467-022-31129-2 ]
Sample:
- 30s ribosomal protein s10 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l36 (4 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s14 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l31 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l15 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Mrna (7 kDa, RNA from Bacteriophage sp.)
- 30s ribosomal protein s21 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s6 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l32 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s3 (25 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l28 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s17 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s9 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l34 (5 kDa, Protein from Pseudomonas aeruginosa PAO1)
- N-formylmethionine (177 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s8 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (29 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l23 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l19 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l29 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l13 (16 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Translation initiation factor if-2 (91 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- 30s ribosomal protein s13 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 16s ribosomal rna (497 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s20 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l6 (19 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s19 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s7 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l4 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l10 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l11 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- P-site initiator trna (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s2 (27 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s15 (10 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s18 (8 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l3 (22 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l18 (12 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s12 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l9 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Pseudomonas aeruginosa 70s ribosome initiation complex bound to if2-gdpcp (structure ii-b) (Complex from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l24 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 23s ribosomal rna (937 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l27 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 30s ribosomal protein s16 (9 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l16 (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l35 (7 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l22 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Water (18 Da, Ligand)
- 30s ribosomal protein s11 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l25 (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l33 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l14 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l30 (6 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l21 (11 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l17 (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l20 (13 kDa, Protein from Pseudomonas aeruginosa PAO1)
- 5s ribosomal rna (38 kDa, RNA from Pseudomonas aeruginosa PAO1)
- 50s ribosomal protein l5 (20 kDa, Protein from Pseudomonas aeruginosa PAO1)