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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"30S ribosomal protein S14" AND microscope_name:"FEI TITAN KRIOS" AND author_orcid:"0009-0007-4618-0667"

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EMD-21908

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30S subunit (head) of 70S Ribosome Enterococcus faecalis MultiBody refinement

Release date: Nov. 4, 2020
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6wua
Q-score: 0.549

Murphy EL, Singh KV, Avila B, Kleffmann T, Gregory ST, Murray BE, Krause KL, Khayat R, Jogl G

Sci Rep (2020) 10 pp. 16301-16301 [ DOI: doi:10.1038/s41598-020-73199-6 Pubmed: 33004869 ]

Sample:

30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis OG1RF)
Enterococcus faecalis (2 MDa, Complex from Enterococcus faecalis OG1RF)
30s ribosomal protein s3 (22 kDa, Protein from Enterococcus faecalis OG1RF)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s13 (12 kDa, Protein from Enterococcus faecalis OG1RF)
16s rrna (501 kDa, RNA from Enterococcus faecalis OG1RF)
30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s19 (8 kDa, Protein from Enterococcus faecalis OG1RF)

[Show more]

EMD-21562

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MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Release date: Oct. 14, 2020
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6w6p
Q-score: 0.627

Murphy EL, Singh KV, Avila B, Kleffmann T, Gregory ST, Murray BE, Krause KL, Khayat R, Jogl G

Sci Rep (2020) 10 pp. 16301-16301 [ DOI: doi:10.1038/s41598-020-73199-6 Pubmed: 33004869 ]

Sample:

50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s17 (9 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l28 (6 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l27 (8 kDa, Protein from Enterococcus faecalis OG1RF)
16s rrna (501 kDa, RNA from Enterococcus faecalis OG1RF)
30s ribosomal protein s3 (22 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l24 (10 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s19 (8 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s13 (12 kDa, Protein from Enterococcus faecalis OG1RF)
5s rrna (37 kDa, RNA from Enterococcus faecalis OG1RF)
30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l17 (14 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s18 (7 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l16 (15 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s11 (12 kDa, Protein from Enterococcus faecalis OG1RF)
70s ribosome (2 MDa, Complex from Enterococcus faecalis OG1RF)
50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis OG1RF)
30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis OG1RF)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l23 (10 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l5 (19 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis OG1RF)
23s rrna (942 kDa, RNA from Enterococcus faecalis OG1RF)
30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis OG1RF)
50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis OG1RF)

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EMD-0656

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Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Release date: Sept. 23, 2020
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 6o8w
Q-score: 0.422

Murphy EL, Singh KV, Avila B, Kleffmann T, Gregory ST, Murray BE, Krause KL, Khayat R, Jogl G

Sci Rep (2020) 10 pp. 16301-16301 [ DOI: doi:10.1038/s41598-020-73199-6 Pubmed: 33004869 ]

Sample:

5s rrna (37 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l28 (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s17 (9 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis)
50s subunit (941 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l5 (19 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s13 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l27 (8 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s11 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s3 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l16 (15 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l17 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l23 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l25 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s18 (7 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l24 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis)
Zinc ion (65 Da, Ligand)
Mrna (1 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis)
Trna (24 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l31 type b (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis)
Enterococcus faecalis (2 MDa, Complex from Enterococcus faecalis)
50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s19 (8 kDa, Protein from Enterococcus faecalis)
16s rrna (493 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis)

[Show more]

EMD-0657

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Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Release date: Sept. 23, 2020
Resolution: 3.68 Å
EM Method: Single-particle
Fitted PDBs: 6o8x
Q-score: 0.402

Murphy EL, Singh KV, Avila B, Kleffmann T, Gregory ST, Murray BE, Krause KL, Khayat R, Jogl G

Sci Rep (2020) 10 pp. 16301-16301 [ DOI: doi:10.1038/s41598-020-73199-6 Pubmed: 33004869 ]

Sample:

5s rrna (37 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s17 (9 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l5 (19 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis)
16s rrna (494 kDa, RNA from Enterococcus faecalis)
30s ribosomal protein s13 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l27 (8 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s11 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s3 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l16 (15 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l17 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l23 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l25 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s18 (7 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l24 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l31 type b (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis)
Zinc ion (65 Da, Ligand)
50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis)
23s rrna (941 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis)
Enterococcus faecalis (2 MDa, Complex from Enterococcus faecalis)
50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s19 (8 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l28 (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis)

[Show more]

EMD-0659

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Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Release date: Sept. 16, 2020
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 6o8z
Q-score: 0.46

Murphy EL, Singh KV, Avila B, Kleffmann T, Gregory ST, Murray BE, Krause KL, Khayat R, Jogl G

Sci Rep (2020) 10 pp. 16301-16301 [ DOI: doi:10.1038/s41598-020-73199-6 Pubmed: 33004869 ]

Sample:

5s rrna (37 kDa, RNA from Enterococcus faecalis)
50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis)
23s rrna (942 kDa, RNA from Enterococcus faecalis)
30s ribosomal protein s17 (9 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l5 (19 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis)
16s rrna (494 kDa, RNA from Enterococcus faecalis)
30s ribosomal protein s13 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l27 (8 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s11 (12 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s3 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l16 (15 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l17 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l23 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l25 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s18 (7 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l24 (10 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis)
Zinc ion (65 Da, Ligand)
50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l31 type b (9 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis)
Enterococcus faecalis (2 MDa, Complex from Enterococcus faecalis)
50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis)
30s ribosomal protein s19 (8 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l28 (6 kDa, Protein from Enterococcus faecalis)
50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis)

[Show more]

Sort by: Download

Showing 1 - 5 of 5. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [5]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: