EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"30S ribosomal protein S14" AND xref_links:"drugbank" AND sample_type:"cell"

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EMD-13412

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70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Release date: May 25, 2022
Resolution: 4.9 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7phb
Q-score: 0.297

Xue L, Lenz S, Zimmermann-Kogadeeva M, Tegunov D, Cramer P, Bork P, Rappsilber J, Mahamid J

Nature (2022) 610 pp. 205-211 [ Pubmed: 36171285 DOI: doi:10.1038/s41586-022-05255-2 ]

Sample:

16s ribosomal rna (491 kDa, RNA from Mycoplasma pneumoniae M129)
30s ribosomal protein s20 (9 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l27 (11 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s16 (10 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s5 (24 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s10 (12 kDa, Protein from Mycoplasma pneumoniae M129)
5s ribosomal rna (34 kDa, RNA from Mycoplasma pneumoniae M129)
30s ribosomal protein s17 (9 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l17 (14 kDa, Protein from Mycoplasma pneumoniae M129)
Nascent peptide (443 Da, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l13 (16 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s19 (10 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s3 (30 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l16 (15 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s14 type z (6 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l19 (13 kDa, Protein from Mycoplasma pneumoniae (strain ATCC 29342 / M129))
30s ribosomal protein s9 (15 kDa, Protein from Mycoplasma pneumoniae M129)
Chloramphenicol (323 Da, Ligand)
30s ribosomal protein s11 (12 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l2 (31 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l15 (16 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s7 (17 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l23 (25 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l31 (10 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s15 (9 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l11 (14 kDa, Protein from Mycoplasma pneumoniae M129)
23s ribosomal rna (940 kDa, RNA from Mycoplasma pneumoniae M129)
50s ribosomal protein l21 (11 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l34 (5 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l36 (4 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l29 (13 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l14 (13 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l35 (6 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l3 (31 kDa, Protein from Mycoplasma pneumoniae M129)
Mrna (12 kDa, RNA from Mycoplasma pneumoniae M129)
Trna-phe (24 kDa, RNA from Mycoplasma pneumoniae M129)
50s ribosomal protein l5 (20 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s6 (25 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s12 (15 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l9 (17 kDa, Protein from Mycoplasma pneumoniae (strain ATCC 29342 / M129))
30s ribosomal protein s13 (14 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l6 (20 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s2 (33 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l10 (17 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s18 (12 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s21 (7 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s8 (15 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l20 (14 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l22 (17 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l28 (7 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l33 1 (6 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l24 (12 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l18 (13 kDa, Protein from Mycoplasma pneumoniae M129)
Cryo-electron tomograms of chloramphenicol-treated mycoplasma pneumoniae cells (Cell from Mycoplasma pneumoniae M129)
50s ribosomal protein l32 (6 kDa, Protein from Mycoplasma pneumoniae M129)

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EMD-13435

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70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Release date: May 25, 2022
Resolution: 4.7 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7pib
Q-score: 0.299

Xue L, Lenz S, Zimmermann-Kogadeeva M, Tegunov D, Cramer P, Bork P, Rappsilber J, Mahamid J

Nature (2022) 610 pp. 205-211 [ Pubmed: 36171285 DOI: doi:10.1038/s41586-022-05255-2 ]

Sample:

16s ribosomal rna (491 kDa, RNA from Mycoplasma pneumoniae M129)
30s ribosomal protein s20 (9 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
Cryo-electron tomograms of spectinomycin-treated mycoplasma pneumoniae cells (Cell from Mycoplasma pneumoniae M129)
50s ribosomal protein l27 (11 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s16 (10 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s5 (24 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s10 (12 kDa, Protein from Mycoplasma pneumoniae M129)
5s ribosomal rna (34 kDa, RNA from Mycoplasma pneumoniae M129)
30s ribosomal protein s17 (9 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l17 (14 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l13 (16 kDa, Protein from Mycoplasma pneumoniae M129)
Elongation factor g (76 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s3 (30 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s19 (10 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l16 (15 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s14 type z (6 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s9 (15 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l7/l12 (13 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s11 (12 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l2 (31 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l15 (16 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l19 (13 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s7 (17 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l23 (25 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l31 (10 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s15 (9 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l11 (14 kDa, Protein from Mycoplasma pneumoniae M129)
23s ribosomal rna (940 kDa, RNA from Mycoplasma pneumoniae M129)
50s ribosomal protein l9 (17 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l21 (11 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l34 (5 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l36 (4 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l29 (13 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l14 (13 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l35 (6 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l3 (31 kDa, Protein from Mycoplasma pneumoniae M129)
Spectinomycin (332 Da, Ligand)
Trna-phe (24 kDa, RNA from Mycoplasma pneumoniae M129)
50s ribosomal protein l5 (20 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s6 (25 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s12 (15 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s13 (14 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l6 (20 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s2 (33 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l10 (17 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s18 (12 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s21 (7 kDa, Protein from Mycoplasma pneumoniae M129)
30s ribosomal protein s8 (15 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l20 (14 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l22 (17 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l28 (7 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l33 1 (6 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l24 (12 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l18 (13 kDa, Protein from Mycoplasma pneumoniae M129)
50s ribosomal protein l32 (6 kDa, Protein from Mycoplasma pneumoniae M129)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: