Edit your search query here and hit Return to execute it:
sample_name:"30S ribosomal protein S14" AND xref_links:"drugbank" AND software_ft:"CTFFIND"
Damaged 70S ribosome with PrfH bound
Release date: Aug. 3, 2022
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 7sa4
Q-score: 0.61
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 7sa4
Q-score: 0.61
Tian Y, Zeng F, Raybarman A, Fatma S, Carruthers A, Li Q, Huang RH
PNAS (2022) 119 pp. e2202464119-e2202464119 [ Pubmed: 35858322 DOI: doi:10.1073/pnas.2202464119 ]
Sample:
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- Putative peptide chain release factor homolog (Cellular component)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- Trna (Cellular component)
- 50s (Complex)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 30s (Complex)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l10 (17 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- P-trna, e-trna (24 kDa, RNA from Escherichia coli)
- Mrna (8 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- Damaged 70s with prfh (Complex from Escherichia coli)
- 16s ribosomal rna (497 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- Peptide chain release factor h (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
Release date: March 23, 2022
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7p7r
Q-score: -0.017
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7p7r
Q-score: -0.017
Crowe-McAuliffe C, Murina V, Turnbull KJ, Huch S, Kasari M, Takada H, Nersisyan L, Sundsfjord A, Hegstad K, Atkinson GC, Pelechano V, Wilson DN, Hauryliuk V
Nat Commun (2022) 13 pp. 1860-1860 [ DOI: doi:10.1038/s41467-022-29274-9 Pubmed: 35387982 ]
Sample:
- 50s ribosomal protein l5 (20 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l28 (7 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- Potassium ion (39 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- Spectinomycin (332 Da, Ligand)
- 30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 1,4-diaminobutane (88 Da, Ligand)
- 30s ribosomal protein s2 (29 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s19 (10 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis V583)
- 5s rrna (37 kDa, RNA from Enterococcus faecalis V583)
- 50s ribosomal protein l31 type b (10 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s18 (9 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 30s ribosomal protein s17 (10 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- Complex of poxta-eq2 bound to the 70s ribosome from e. faecalis (initiation complex), state i. (2 MDa, Complex)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l33 3 (5 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 23s rrna (944 kDa, RNA from Enterococcus faecalis V583)
- Trna-fmet (24 kDa, RNA from Enterococcus faecalis V583)
- Mrna (6 kDa, RNA from Enterococcus faecalis V583)
- Are-abc-f family resistance factor poxta (70 kDa, Complex from Enterococcus faecalis)
- 50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 16s rrna (504 kDa, RNA from Enterococcus faecalis V583)
- 50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s13 (13 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l24 (11 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 70s ribosome (2 MDa, Complex from Enterococcus faecalis)
- 50s ribosomal protein l17 (14 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l27 (10 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s11 (13 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l1 (24 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l32-3 (6 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- Are-abc-f family resistance factor poxta (67 kDa, Protein from Enterococcus faecalis V583)
- 50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s3 (24 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l23 (11 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
- 50s ribosomal protein l16 (16 kDa, Protein from Enterococcus faecalis (strain ATCC 700802 / V583))
PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II
Release date: Feb. 23, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7p7s
Q-score: 0.526
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7p7s
Q-score: 0.526
Crowe-McAuliffe C, Murina V, Turnbull KJ, Huch S, Kasari M, Takada H, Nersisyan L, Sundsfjord A, Hegstad K, Atkinson GC, Pelechano V, Wilson DN, Hauryliuk V
Nat Commun (2022) 13 pp. 1860-1860 [ DOI: doi:10.1038/s41467-022-29274-9 Pubmed: 35387982 ]
Sample:
- 30s ribosomal protein s19 (10 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s11 (13 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis)
- Are-abc-f family resistance factor poxta (67 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis)
- 16s rrna (504 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s17 (10 kDa, Protein from Streptococcus faecalis)
- 23s rrna (944 kDa, RNA from Enterococcus faecalis)
- 50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l24 (11 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s2 (29 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis)
- Potassium ion (39 Da, Ligand)
- 50s ribosomal protein l31 type b (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis)
- Zinc ion (65 Da, Ligand)
- Mrna (6 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s13 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis)
- Are-abc-f family resistance factor poxta (Complex from Enterococcus faecalis)
- 1,4-diaminobutane (88 Da, Ligand)
- 50s ribosomal protein l28 (7 kDa, Protein from Enterococcus faecalis)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 50s ribosomal protein l23 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis)
- 70s ribosome (Complex from Enterococcus faecalis)
- 5s rrna (37 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s18 (9 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l16 (16 kDa, Protein from Streptococcus faecalis)
- 50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis)
- Complex of poxta-eq2 bound to the 70s ribosome from e. faecalis (initiation complex), state ii. (Complex)
- 50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis)
- Trna-fmet (25 kDa, RNA from Enterococcus faecalis)
- 50s ribosomal protein l5 (20 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s3 (24 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l1 (24 kDa, Protein from Enterococcus faecalis)
- Spectinomycin (332 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l27 (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l17 (14 kDa, Protein from Enterococcus faecalis)
PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III
Release date: Feb. 23, 2022
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7p7t
Q-score: 0.534
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7p7t
Q-score: 0.534
Crowe-McAuliffe C, Murina V, Turnbull KJ, Huch S, Kasari M, Takada H, Nersisyan L, Sundsfjord A, Hegstad K, Atkinson GC, Pelechano V, Wilson DN, Hauryliuk V
Nat Commun (2022) 13 pp. 1860-1860 [ DOI: doi:10.1038/s41467-022-29274-9 Pubmed: 35387982 ]
Sample:
- 30s ribosomal protein s19 (10 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s11 (13 kDa, Protein from Enterococcus faecalis)
- A-site trna (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis)
- Are-abc-f family resistance factor poxta (67 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis)
- Mrna (6 kDa, RNA from Enterococcus faecalis)
- 50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis)
- Trna-fmet (24 kDa, RNA from Enterococcus faecalis)
- 70s ribosome (Cellular component from Enterococcus faecalis)
- 16s rrna (504 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s17 (10 kDa, Protein from Enterococcus faecalis)
- 23s rrna (944 kDa, RNA from Enterococcus faecalis)
- 50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l24 (11 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s2 (29 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis)
- A-site trna (Complex from Escherichia coli)
- 50s ribosomal protein l31 type b (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis)
- Potassium ion (39 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Complex of poxta-eq2 bound to the 70s ribosome from e. faecalis (initiation complex), state iii. (Complex)
- 30s ribosomal protein s13 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis)
- Are-abc-f family resistance factor poxta (Complex from Enterococcus faecalis)
- 1,4-diaminobutane (88 Da, Ligand)
- 50s ribosomal protein l16 (16 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l28 (7 kDa, Protein from Enterococcus faecalis)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 50s ribosomal protein l23 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis)
- 5s rrna (37 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s18 (9 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis)
- Water (18 Da, Ligand)
- 50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s3 (24 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l5 (20 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis)
- Spectinomycin (332 Da, Ligand)
- 50s ribosomal protein l1 (24 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l27 (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l17 (14 kDa, Protein from Enterococcus faecalis)
E. faecalis 70S ribosome with P-tRNA, state IV
Release date: Feb. 23, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7p7u
Q-score: 0.526
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7p7u
Q-score: 0.526
Crowe-McAuliffe C, Murina V, Turnbull KJ, Huch S, Kasari M, Takada H, Nersisyan L, Sundsfjord A, Hegstad K, Atkinson GC, Pelechano V, Wilson DN, Hauryliuk V
Nat Commun (2022) 13 pp. 1860-1860 [ DOI: doi:10.1038/s41467-022-29274-9 Pubmed: 35387982 ]
Sample:
- 30s ribosomal protein s19 (10 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s11 (13 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis)
- Trna-fmet (24 kDa, RNA from Enterococcus faecalis)
- 16s rrna (504 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s17 (10 kDa, Protein from Streptococcus faecalis)
- 23s rrna (944 kDa, RNA from Enterococcus faecalis)
- 50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l24 (11 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s2 (29 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis)
- Potassium ion (39 Da, Ligand)
- 50s ribosomal protein l31 type b (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis)
- Zinc ion (65 Da, Ligand)
- Mrna (6 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s13 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis)
- 70s ribosome from e. faecalis with p-trna (initiation complex), state iv. (Complex from Enterococcus faecalis)
- 50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis)
- 1,4-diaminobutane (88 Da, Ligand)
- 50s ribosomal protein l16 (16 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l28 (7 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l23 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis)
- 5s rrna (37 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s18 (9 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s3 (24 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l5 (20 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis)
- Spectinomycin (332 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l27 (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l17 (14 kDa, Protein from Enterococcus faecalis)
Mid translocation intermediate with EF-G bound with GDP (Structure IV)
Release date: Feb. 23, 2022
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7ssd
Q-score: 0.385
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7ssd
Q-score: 0.385
Carbone CE, Loveland AB, Gamper Jr HB, Hou YM, Demo G, Korostelev AA
Nat Commun (2021) 12 pp. 7236-7236 [ DOI: doi:10.1038/s41467-021-27415-0 Pubmed: 34903725 ]
Sample:
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 16s rrna (498 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 5s rna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli K-12)
- Mid translocation intermediate with ef-g bound with gdp (structure iv) (2 MDa, Complex from Escherichia coli K-12)
- Mrna (12 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s6 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- 23s rrna (941 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Trna fmet (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- Trna pro (24 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- Elongation factor g (76 kDa, Protein from Escherichia coli 113303)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (25 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l1 (24 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
Release date: Feb. 23, 2022
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7ssl
Q-score: 0.326
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7ssl
Q-score: 0.326
Carbone CE, Loveland AB, Gamper Jr HB, Hou YM, Demo G, Korostelev AA
Nat Commun (2021) 12 pp. 7236-7236 [ DOI: doi:10.1038/s41467-021-27415-0 Pubmed: 34903725 ]
Sample:
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
- Elongation factor g (76 kDa, Protein from Escherichia coli 113303)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- Trna pro (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l1 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- Pre translocation intermediate with ef-g bound to gdp and pi (structure iii) (2 MDa, Complex from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (5 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli K-12)
- 5s rrna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli K-12)
- Mrna (11 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- Trna fmet (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 16s rrna (498 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- Phosphate ion (94 Da, Ligand)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli K-12)
- 23s rrna (941 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s2 (25 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli K-12)
Release date: Feb. 23, 2022
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7st7
Q-score: 0.417
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7st7
Q-score: 0.417
Carbone CE, Loveland AB, Gamper Jr HB, Hou YM, Demo G, Korostelev AA
Nat Commun (2021) 12 pp. 7236-7236 [ DOI: doi:10.1038/s41467-021-27415-0 Pubmed: 34903725 ]
Sample:
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 5s rrna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 16s rrna (498 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s2 (24 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (7 kDa, Protein from Escherichia coli K-12)
- Trna pro (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- 23s rrna (941 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- Trna fmet (24 kDa, RNA from Escherichia coli K-12)
- Phosphate ion (94 Da, Ligand)
- 50s ribosomal protein l1 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
- Pre translocation intermediate stalled with viomycin and bound with ef-g in a gdp and pi state (structure iii-vio) (2 MDa, Complex)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- Elongation factor g (76 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli K-12)
- Mrna (6 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- Viomycin (703 Da, Protein from Streptomyces californicus)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
Release date: May 5, 2021
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7nhk
Q-score: 0.519
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7nhk
Q-score: 0.519
Crowe-McAuliffe C, Murina V, Turnbull KJ, Kasari M, Mohamad M, Polte C, Takada H, Vaitkevicius K, Johansson J, Ignatova Z, Atkinson GC, O'Neill AJ, Hauryliuk V, Wilson DN
Nat Commun (2021) 12 pp. 3577-3577 [ Pubmed: 34117249 DOI: doi:10.1038/s41467-021-23753-1 ]
Sample:
- 5s rrna (37 kDa, RNA from Enterococcus faecalis)
- 50s ribosomal protein l22 (12 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l16 (16 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s4 (23 kDa, Protein from Enterococcus faecalis)
- Potassium ion (39 Da, Ligand)
- 30s ribosomal protein s17 (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l36 (4 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l35 (7 kDa, Protein from Enterococcus faecalis)
- 1,4-diaminobutane (88 Da, Ligand)
- 30s ribosomal protein s10 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l30 (6 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s15 (10 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s2 (29 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l32 (6 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s6 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l2 (30 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s7 (17 kDa, Protein from Enterococcus faecalis)
- Rna (5'-r(p*gp*gp*ap*gp*gp*up*ap*up*gp*ap*cp*ap*a)-3') (5 kDa, RNA from Enterococcus faecalis)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 50s ribosomal protein l17 (14 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l29 (7 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s20 (8 kDa, Protein from Enterococcus faecalis)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s16 (10 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s8 (14 kDa, Protein from Enterococcus faecalis)
- Abc-f type ribosomal protection protein lsa(a) (62 kDa, Protein from Enterococcus faecalis)
- 16s rrna (504 kDa, RNA from Enterococcus faecalis)
- Lsaa-in complex with 70s ribosome, mrna, and trna (2 MDa, Complex from Enterococcus faecalis)
- 30s ribosomal protein s11 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l4 (22 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l18 (12 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l27 (10 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s18 (9 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s5 (17 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l33 (6 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l13 (16 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l6 (19 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l14 (13 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s3 (24 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s12 (15 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l5 (20 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s19 (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l15 (15 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l1 (24 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l23 (11 kDa, Protein from Enterococcus faecalis)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s13 (13 kDa, Protein from Enterococcus faecalis)
- 23s rrna (944 kDa, RNA from Enterococcus faecalis)
- 30s ribosomal protein s9 (14 kDa, Protein from Enterococcus faecalis)
- 30s ribosomal protein s14 type z (7 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l31 type b (10 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l24 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l21 (11 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l28 (7 kDa, Protein from Enterococcus faecalis)
- Trna-fmeti (24 kDa, RNA from Enterococcus faecalis)
- 50s ribosomal protein l3 (22 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l20 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l19 (13 kDa, Protein from Enterococcus faecalis)
- 50s ribosomal protein l34 (5 kDa, Protein from Enterococcus faecalis)
Conformation of methylated GGQ in the peptidyl transferase center during translation termination
Release date: Feb. 21, 2018
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 6c4i
Q-score: 0.432
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 6c4i
Q-score: 0.432
Sci Rep (2018) 8 pp. 2349-2349 [ DOI: doi:10.1038/s41598-018-20107-8 Pubmed: 29403017 ]
Sample:
- 50s ribosomal protein l35 (Cellular component from Escherichia coli)
- 30s ribosomal protein s6 (Cellular component from Escherichia coli)
- 50s ribosomal protein l3 (Cellular component from Escherichia coli)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s19 (Cellular component from Escherichia coli)
- 50s ribosomal protein l28 (Cellular component from Escherichia coli)
- 30s ribosomal protein s14 (Cellular component from Escherichia coli)
- 30s ribosomal proteins (Complex from Escherichia coli)
- 50s ribosomal protein l11 (Cellular component from Escherichia coli)
- E-site or p-site trna fmet (24 kDa, RNA from Escherichia coli)
- E-site or p-site trna fmet (Cellular component from Escherichia coli)
- 30s ribosomal protein s3 (Cellular component from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (Cellular component from Escherichia coli)
- 50s ribosomal protein l34 (Cellular component from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s12 (Cellular component from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s16 (Cellular component from Escherichia coli)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (Cellular component from Escherichia coli)
- 50s ribosomal protein l4 (Cellular component from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (Cellular component from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (Cellular component from Escherichia coli)
- 5s rrna (Cellular component from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (Cellular component from Escherichia coli)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- Peptide chain release factor 2 (Cellular component from Escherichia coli)
- 50s ribosomal protein l9 (Cellular component from Escherichia coli)
- 50s ribosomal protein l25 (Cellular component from Escherichia coli)
- Alternative ribosome-rescue factor a (Cellular component from Escherichia coli)
- 16s rrna (497 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l18 (Cellular component from Escherichia coli)
- 50s ribosomal protein l15 (Cellular component from Escherichia coli)
- 16s rrna (Cellular component from Escherichia coli)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli)
- Peptide chain release factor 2 (43 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (Cellular component from Escherichia coli)
- 50s ribosomal protein l31 (Cellular component from Escherichia coli)
- 30s ribosomal protein s2 (Cellular component from Escherichia coli)
- 30s ribosomal protein s7 (Cellular component from Escherichia coli)
- 50s ribosomal protein l20 (Cellular component from Escherichia coli)
- 30s ribosomal protein s5 (Cellular component from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l10 (Cellular component from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (Cellular component from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (Cellular component from Escherichia coli)
- 30s ribosomal protein s15 (Cellular component from Escherichia coli)
- 50s ribosomal protein l17 (Cellular component from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (Cellular component from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (Cellular component from Escherichia coli)
- 30s subunit (Complex from Escherichia coli)
- 50s ribosomal protein l24 (Cellular component from Escherichia coli)
- 30s ribosomal protein s11 (Cellular component from Escherichia coli)
- 50s ribosomal protein l33 (Cellular component from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l29 (Cellular component from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- 50s ribosomal protein l13 (Cellular component from Escherichia coli)
- Alternative ribosome-rescue factor a (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- Mrna (5 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l14 (Cellular component from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (Cellular component from Escherichia coli)
- 30s ribosomal protein s17 (Cellular component from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (Cellular component from Escherichia coli)
- 50s ribosomal protein l27 (Cellular component from Escherichia coli)
- 30s ribosomal protein s8 (Cellular component from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l10 (17 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- 50s subunit (Complex from Escherichia coli)
- 23s rrna (Cellular component from Escherichia coli)
- 30s ribosomal protein s10 (Cellular component from Escherichia coli)
- 50s ribosomal protein l16 (Cellular component from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l2 (Cellular component from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal proteins (Complex from Escherichia coli)
- 50s ribosomal protein l32 (Cellular component from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (Cellular component from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- Nonstop mrna (Cellular component from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- Nonstop ribosomal complex with arfa/rf2 (Complex)
- 50s ribosomal protein l5 (Cellular component from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)