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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"30S ribosomal subunit" AND structure_determination_method:"singleparticle" AND citation_journal_name:"ACS CHEM BIOL"

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EMD-31655

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T.thermophilus 30S ribosome with KsgA, class K1k2

Release date: April 6, 2022
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7v2l
Q-score: 0.524

Singh J, Raina R, Vinothkumar KR, Anand R

ACS Chem Biol (2022) 17 pp. 829-839 [ DOI: doi:10.1021/acschembio.1c00732 Pubmed: 35316014 ]

Sample:

30s ribosomal subunit (Complex from Thermus thermophilus HB8)
30s ribosomal protein s11 (13 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s8 (15 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s6 (11 kDa, Protein from Thermus thermophilus HB8)
16s ribosomal rna (493 kDa, RNA from Thermus thermophilus HB8)
30s ribosomal protein s19 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s17 (12 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s10 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s16 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s13 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s9 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s14 type z (7 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s12 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s15 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein thx (3 kDa, Protein from Thermus thermophilus HB8)
Rna methyltransferase (Complex from Bacillus subtilis (strain 168))
Zinc ion (65 Da, Ligand)
30s ribosomal protein s7 (18 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal with bound ksga, a rna methyltransferase at position 2 (746 kDa, Complex)
30s ribosomal protein s5 (17 kDa, Protein from Thermus thermophilus HB8)
Ribosomal rna small subunit methyltransferase a (33 kDa, Protein from Bacillus subtilis (strain 168))
30s ribosomal protein s18 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s2 (29 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s4 (24 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s20 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s3 (26 kDa, Protein from Thermus thermophilus HB8)

[Show more]

EMD-31656

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T.thermophilus 30S ribosome with KsgA, class K1k4

Release date: April 6, 2022
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7v2m
Q-score: 0.478

Singh J, Raina R, Vinothkumar KR, Anand R

ACS Chem Biol (2022) 17 pp. 829-839 [ DOI: doi:10.1021/acschembio.1c00732 Pubmed: 35316014 ]

Sample:

30s ribosomal subunit (Complex from Thermus thermophilus HB8)
30s ribosomal protein s11 (13 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s8 (15 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s6 (11 kDa, Protein from Thermus thermophilus HB8)
16s ribosomal rna (493 kDa, RNA from Thermus thermophilus HB8)
30s ribosomal protein s19 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s17 (12 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s10 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s16 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s13 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s9 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s14 type z (7 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s12 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal with bound ksga, a rna methyltransferase (771 kDa, Complex)
30s ribosomal protein s15 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein thx (3 kDa, Protein from Thermus thermophilus HB8)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s7 (18 kDa, Protein from Thermus thermophilus HB8)
Ksga (Complex from Bacillus subtilis (strain 168))
30s ribosomal protein s5 (17 kDa, Protein from Thermus thermophilus HB8)
Ribosomal rna small subunit methyltransferase a (33 kDa, Protein from Bacillus subtilis (strain 168))
30s ribosomal protein s18 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s2 (29 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s4 (24 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s20 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s3 (26 kDa, Protein from Thermus thermophilus HB8)

[Show more]

EMD-31657

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T.thermophilus 30S ribosome with KsgA, class K2

Release date: April 6, 2022
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7v2n
Q-score: 0.446

Singh J, Raina R, Vinothkumar KR, Anand R

ACS Chem Biol (2022) 17 pp. 829-839 [ DOI: doi:10.1021/acschembio.1c00732 Pubmed: 35316014 ]

Sample:

30s ribosomal protein s19 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein thx (3 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s10 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s18 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s9 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s12 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s13 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s15 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s3 (26 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s20 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s8 (15 kDa, Protein from Thermus thermophilus HB8)
16s ribosomal rna (493 kDa, RNA from Thermus thermophilus HB8)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s11 (13 kDa, Protein from Thermus thermophilus HB8)
Ribosomal rna small subunit methyltransferase a (33 kDa, Protein from Bacillus subtilis (strain 168))
30s ribosomal subunit (Complex from Thermus thermophilus HB8)
30s ribosomal with bound ksga, a rna methyltransferase (710 kDa, Complex)
30s ribosomal protein s7 (18 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s16 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s5 (17 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s4 (24 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s17 (12 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s14 type z (7 kDa, Protein from Thermus thermophilus HB8)
Ksga (Complex from Bacillus subtilis (strain 168))
30s ribosomal protein s2 (29 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s6 (11 kDa, Protein from Thermus thermophilus HB8)

[Show more]

EMD-31658

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T.thermophilus 30S ribosome with KsgA, class K4

Release date: April 6, 2022
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7v2o
Q-score: 0.466

Singh J, Raina R, Vinothkumar KR, Anand R

ACS Chem Biol (2022) 17 pp. 829-839 [ DOI: doi:10.1021/acschembio.1c00732 Pubmed: 35316014 ]

Sample:

30s ribosomal protein s19 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein thx (3 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s10 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s18 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s9 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s12 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s13 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s15 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s3 (26 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s20 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s8 (15 kDa, Protein from Thermus thermophilus HB8)
16s ribosomal rna (493 kDa, RNA from Thermus thermophilus HB8)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s11 (13 kDa, Protein from Thermus thermophilus HB8)
Ribosomal rna small subunit methyltransferase a (33 kDa, Protein from Bacillus subtilis (strain 168))
30s ribosomal subunit (Complex from Thermus thermophilus HB8)
30s ribosomal with bound ksga, a rna methyltransferase (740 kDa, Complex)
30s ribosomal protein s7 (18 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s16 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s5 (17 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s4 (24 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s17 (12 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s14 type z (7 kDa, Protein from Thermus thermophilus HB8)
Ksga (Complex from Bacillus subtilis (strain 168))
30s ribosomal protein s2 (29 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s6 (11 kDa, Protein from Thermus thermophilus HB8)

[Show more]

EMD-31659

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T.thermophilus 30S ribosome with KsgA, class K5

Release date: April 6, 2022
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7v2p
Q-score: 0.53

Singh J, Raina R, Vinothkumar KR, Anand R

ACS Chem Biol (2022) 17 pp. 829-839 [ DOI: doi:10.1021/acschembio.1c00732 Pubmed: 35316014 ]

Sample:

30s ribosomal subunit (Complex from Thermus thermophilus HB8)
30s ribosomal protein s11 (13 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s8 (15 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s6 (11 kDa, Protein from Thermus thermophilus HB8)
16s ribosomal rna (493 kDa, RNA from Thermus thermophilus HB8)
30s ribosomal protein s19 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s17 (12 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s10 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s16 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s13 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal with bound ksga, a rna methyltransferase (720 kDa, Complex)
30s ribosomal protein s9 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s14 type z (7 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s12 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s15 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein thx (3 kDa, Protein from Thermus thermophilus HB8)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s7 (18 kDa, Protein from Thermus thermophilus HB8)
Ksga (Complex from Bacillus subtilis (strain 168))
30s ribosomal protein s5 (17 kDa, Protein from Thermus thermophilus HB8)
Ribosomal rna small subunit methyltransferase a (33 kDa, Protein from Bacillus subtilis (strain 168))
30s ribosomal protein s18 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s2 (29 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s4 (24 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s20 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s3 (26 kDa, Protein from Thermus thermophilus HB8)

[Show more]

EMD-31660

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T.thermophilus 30S ribosome with KsgA, class K6

Release date: April 6, 2022
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 7v2q
Q-score: 0.486

Singh J, Raina R, Vinothkumar KR, Anand R

ACS Chem Biol (2022) 17 pp. 829-839 [ DOI: doi:10.1021/acschembio.1c00732 Pubmed: 35316014 ]

Sample:

30s ribosomal subunit (Complex from Thermus thermophilus HB8)
30s ribosomal protein s11 (13 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s8 (15 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s6 (11 kDa, Protein from Thermus thermophilus HB8)
16s ribosomal rna (493 kDa, RNA from Thermus thermophilus HB8)
30s ribosomal protein s19 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal with bound ksga, a rna methyltransferase (740 kDa, Complex)
30s ribosomal protein s17 (12 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s10 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s16 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s13 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s9 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s14 type z (7 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s12 (14 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s15 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein thx (3 kDa, Protein from Thermus thermophilus HB8)
Zinc ion (65 Da, Ligand)
30s ribosomal protein s7 (18 kDa, Protein from Thermus thermophilus HB8)
Ksga (Complex from Bacillus subtilis (strain 168))
30s ribosomal protein s5 (17 kDa, Protein from Thermus thermophilus HB8)
Ribosomal rna small subunit methyltransferase a (33 kDa, Protein from Bacillus subtilis (strain 168))
30s ribosomal protein s18 (10 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s2 (29 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s4 (24 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s20 (11 kDa, Protein from Thermus thermophilus HB8)
30s ribosomal protein s3 (26 kDa, Protein from Thermus thermophilus HB8)

[Show more]

Sort by: Download

Showing 1 - 6 of 6. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [6]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: