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sample_name:"39S ribosomal protein L33, mitochondrial" AND author_orcid:"0000-0002-8136-2753"

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EMD-11278

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Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Release date: Jan. 13, 2021
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 6zm5
Q-score: 0.552

Itoh Y, Andrell J, Choi A, Richter U, Maiti P, Best RB, Barrientos A, Battersby BJ, Amunts A

Science (2021) 371 pp. 846-849 [ DOI: doi:10.1126/science.abe0763 Pubmed: 33602856 ]

Sample:

28s ribosomal protein s27, mitochondrial (47 kDa, Protein from Homo sapiens)
39s ribosomal protein l2, mitochondrial (33 kDa, Protein from Homo sapiens)
39s ribosomal protein l47, mitochondrial (29 kDa, Protein from Homo sapiens)
39s ribosomal protein l46, mitochondrial (31 kDa, Protein from Homo sapiens)
28s ribosomal protein s11, mitochondrial (20 kDa, Protein from Homo sapiens)
28s ribosomal protein s10, mitochondrial (23 kDa, Protein from Homo sapiens)
Aurora kinase a-interacting protein (22 kDa, Protein from Homo sapiens)
39s ribosomal protein l3, mitochondrial (38 kDa, Protein from Homo sapiens)
39s ribosomal protein s30, mitochondrial (50 kDa, Protein from Homo sapiens)
39s ribosomal protein l32, mitochondrial (21 kDa, Protein from Homo sapiens)
Water (18 Da, Ligand)
28s ribosomal protein s24, mitochondrial (19 kDa, Protein from Homo sapiens)
28s ribosomal protein s35, mitochondrial (36 kDa, Protein from Homo sapiens)
28s ribosomal protein s28, mitochondrial (20 kDa, Protein from Homo sapiens)
Fe2/s2 (inorganic) cluster (175 Da, Ligand)
39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from Homo sapiens)
39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Homo sapiens)
P-site trna (22 kDa, RNA from Homo sapiens)
39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Homo sapiens)
39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Homo sapiens)
39s ribosomal protein l18, mitochondrial (20 kDa, Protein from Homo sapiens)
39s ribosomal protein l17, mitochondrial (20 kDa, Protein from Homo sapiens)
39s ribosomal protein l22, mitochondrial (23 kDa, Protein from Homo sapiens)
39s ribosomal protein l36, mitochondrial (11 kDa, Protein from Homo sapiens)
39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Homo sapiens)
39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
39s ribosomal protein l55, mitochondrial (15 kDa, Protein from Homo sapiens)
39s ribosomal protein l49, mitochondrial (19 kDa, Protein from Homo sapiens)
28s ribosomal protein s23, mitochondrial (21 kDa, Protein from Homo sapiens)
Potassium ion (39 Da, Ligand)
39s ribosomal protein l14, mitochondrial (15 kDa, Protein from Homo sapiens)
Translating ribosome with insertase (2 MDa, Complex from Homo sapiens)
39s ribosomal protein l43, mitochondrial (23 kDa, Protein from Homo sapiens)
39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Homo sapiens)
39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Homo sapiens)
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from Homo sapiens)
39s ribosomal protein l53, mitochondrial (12 kDa, Protein from Homo sapiens)
39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Homo sapiens)
Large subunit of ribosome (Complex from Homo sapiens)
Nascent polypeptide (2 kDa, Protein from Homo sapiens)
39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Homo sapiens)
12s mitochondrial rrna (306 kDa, RNA from Homo sapiens)
39s ribosomal protein l27, mitochondrial (16 kDa, Protein from Homo sapiens)
39s ribosomal protein l40, mitochondrial (24 kDa, Protein from Homo sapiens)
39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s34, mitochondrial (25 kDa, Protein from Homo sapiens)
28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Homo sapiens)
28s ribosomal protein s31, mitochondrial (45 kDa, Protein from Homo sapiens)
Guanosine-5'-triphosphate (523 Da, Ligand)
39s ribosomal protein l45, mitochondrial (35 kDa, Protein from Homo sapiens)
28s ribosomal protein s6, mitochondrial (14 kDa, Protein from Homo sapiens)
28s ribosomal protein s26, mitochondrial (24 kDa, Protein from Homo sapiens)
Pentatricopeptide repeat domain-containing protein 3, mitochondrial (78 kDa, Protein from Homo sapiens)
39s ribosomal protein l50, mitochondrial (18 kDa, Protein from Homo sapiens)
28s ribosomal protein s29, mitochondrial (45 kDa, Protein from Homo sapiens)
39s ribosomal protein l48, mitochondrial (23 kDa, Protein from Homo sapiens)
Mitochondrial inner membrane protein oxa1l (48 kDa, Protein from Homo sapiens)
39s ribosomal protein l10, mitochondrial (29 kDa, Protein from Homo sapiens)
Small subunit of ribosome (Complex from Homo sapiens)
39s ribosomal protein l39, mitochondrial (38 kDa, Protein from Homo sapiens)
28s ribosomal protein s25, mitochondrial (20 kDa, Protein from Homo sapiens)
Magnesium ion (24 Da, Ligand)
A-site trna with aminoacylation (21 kDa, RNA from Homo sapiens)
28s ribosomal protein s7, mitochondrial (28 kDa, Protein from Homo sapiens)
28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Homo sapiens)
39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s15, mitochondrial (29 kDa, Protein from Homo sapiens)
28s ribosomal protein s14, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s22, mitochondrial (41 kDa, Protein from Homo sapiens)
28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Homo sapiens)
28s ribosomal protein s18c, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Homo sapiens)
39s ribosomal protein l12, mitochondrial (21 kDa, Protein from Homo sapiens)
Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from Homo sapiens)
28s ribosomal protein s12, mitochondrial (15 kDa, Protein from Homo sapiens)
39s ribosomal protein l21, mitochondrial (22 kDa, Protein from Homo sapiens)
39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Homo sapiens)
Mitochondrial trnaval (22 kDa, RNA from Homo sapiens)
39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Homo sapiens)
39s ribosomal protein l42, mitochondrial (16 kDa, Protein from Homo sapiens)
28s ribosomal protein s17, mitochondrial (14 kDa, Protein from Homo sapiens)
Zinc ion (65 Da, Ligand)
39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Homo sapiens)
39s ribosomal protein l4, mitochondrial (34 kDa, Protein from Homo sapiens)
39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Homo sapiens)
39s ribosomal protein l20, mitochondrial (17 kDa, Protein from Homo sapiens)
28s ribosomal protein s33, mitochondrial (12 kDa, Protein from Homo sapiens)
39s ribosomal protein l24, mitochondrial (24 kDa, Protein from Homo sapiens)
Adenosine-5'-triphosphate (507 Da, Ligand)
28s ribosomal protein s5, mitochondrial (48 kDa, Protein from Homo sapiens)
28s ribosomal protein s2, mitochondrial (33 kDa, Protein from Homo sapiens)
Mrna (6 kDa, RNA from Homo sapiens)
Alanine (89 Da, Ligand)
16s mitochondrial rrna (500 kDa, RNA from Homo sapiens)
39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Homo sapiens)
Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from Homo sapiens)
39s ribosomal protein l37, mitochondrial (48 kDa, Protein from Homo sapiens)
39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Homo sapiens)
39s ribosomal protein l11, mitochondrial (20 kDa, Protein from Homo sapiens)
Oxa1l insertase (Complex from Homo sapiens)
Ribosomal protein 63, mitochondrial (12 kDa, Protein from Homo sapiens)

[Show more]

EMD-11279

Download Map 3D View

Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA

Release date: Jan. 13, 2021
Resolution: 2.59 Å
EM Method: Single-particle
Fitted PDBs: 6zm6
Q-score: 0.579

Itoh Y, Andrell J, Choi A, Richter U, Maiti P, Best RB, Barrientos A, Battersby BJ, Amunts A

Science (2021) 371 pp. 846-849 [ DOI: doi:10.1126/science.abe0763 Pubmed: 33602856 ]

Sample:

39s ribosomal protein l36, mitochondrial (11 kDa, Protein from Homo sapiens)
39s ribosomal protein l21, mitochondrial (22 kDa, Protein from Homo sapiens)
28s ribosomal protein s11, mitochondrial (20 kDa, Protein from Homo sapiens)
Adenosine-5'-triphosphate (507 Da, Ligand)
Small subunit of ribosome (Complex from Homo sapiens)
Mitochondrial trnaval (22 kDa, RNA from Homo sapiens)
39s ribosomal protein l24, mitochondrial (24 kDa, Protein from Homo sapiens)
39s ribosomal protein l37, mitochondrial (48 kDa, Protein from Homo sapiens)
39s ribosomal protein l55, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s6, mitochondrial (14 kDa, Protein from Homo sapiens)
28s ribosomal protein s12, mitochondrial (15 kDa, Protein from Homo sapiens)
P-site trna (22 kDa, RNA from Homo sapiens)
39s ribosomal protein l12, mitochondrial (21 kDa, Protein from Homo sapiens)
39s ribosomal protein l39, mitochondrial (38 kDa, Protein from Homo sapiens)
39s ribosomal protein l22, mitochondrial (23 kDa, Protein from Homo sapiens)
39s ribosomal protein l32, mitochondrial (21 kDa, Protein from Homo sapiens)
39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Homo sapiens)
39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Homo sapiens)
39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Homo sapiens)
28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Homo sapiens)
39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Homo sapiens)
39s ribosomal protein s30, mitochondrial (50 kDa, Protein from Homo sapiens)
39s ribosomal protein l46, mitochondrial (31 kDa, Protein from Homo sapiens)
39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Homo sapiens)
Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from Homo sapiens)
Guanosine-5'-triphosphate (523 Da, Ligand)
28s ribosomal protein s25, mitochondrial (20 kDa, Protein from Homo sapiens)
39s ribosomal protein l53, mitochondrial (12 kDa, Protein from Homo sapiens)
39s ribosomal protein l47, mitochondrial (29 kDa, Protein from Homo sapiens)
39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Homo sapiens)
39s ribosomal protein l42, mitochondrial (16 kDa, Protein from Homo sapiens)
16s mitochondrial rrna (500 kDa, RNA from Homo sapiens)
28s ribosomal protein s10, mitochondrial (23 kDa, Protein from Homo sapiens)
28s ribosomal protein s28, mitochondrial (20 kDa, Protein from Homo sapiens)
39s ribosomal protein l4, mitochondrial (34 kDa, Protein from Homo sapiens)
39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from Homo sapiens)
39s ribosomal protein l20, mitochondrial (17 kDa, Protein from Homo sapiens)
39s ribosomal protein l45, mitochondrial (35 kDa, Protein from Homo sapiens)
39s ribosomal protein l50, mitochondrial (18 kDa, Protein from Homo sapiens)
Large subunit of ribosome (Complex from Homo sapiens)
28s ribosomal protein s33, mitochondrial (12 kDa, Protein from Homo sapiens)
28s ribosomal protein s31, mitochondrial (45 kDa, Protein from Homo sapiens)
39s ribosomal protein l3, mitochondrial (38 kDa, Protein from Homo sapiens)
39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Homo sapiens)
39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Homo sapiens)
Potassium ion (39 Da, Ligand)
28s ribosomal protein s22, mitochondrial (41 kDa, Protein from Homo sapiens)
39s ribosomal protein l18, mitochondrial (20 kDa, Protein from Homo sapiens)
28s ribosomal protein s5, mitochondrial (48 kDa, Protein from Homo sapiens)
A-site trna (21 kDa, RNA from Homo sapiens)
39s ribosomal protein l49, mitochondrial (19 kDa, Protein from Homo sapiens)
39s ribosomal protein l2, mitochondrial (33 kDa, Protein from Homo sapiens)
28s ribosomal protein s18c, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s15, mitochondrial (29 kDa, Protein from Homo sapiens)
28s ribosomal protein s7, mitochondrial (28 kDa, Protein from Homo sapiens)
39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Homo sapiens)
Pentatricopeptide repeat domain-containing protein 3, mitochondrial (78 kDa, Protein from Homo sapiens)
39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s29, mitochondrial (45 kDa, Protein from Homo sapiens)
Fe2/s2 (inorganic) cluster (175 Da, Ligand)
39s ribosomal protein l14, mitochondrial (15 kDa, Protein from Homo sapiens)
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from Homo sapiens)
28s ribosomal protein s26, mitochondrial (24 kDa, Protein from Homo sapiens)
39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Homo sapiens)
Ribosome with mrna and trnas (2 MDa, Complex from Homo sapiens)
Zinc ion (65 Da, Ligand)
28s ribosomal protein s35, mitochondrial (36 kDa, Protein from Homo sapiens)
39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Homo sapiens)
39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Homo sapiens)
Water (18 Da, Ligand)
39s ribosomal protein l11, mitochondrial (20 kDa, Protein from Homo sapiens)
39s ribosomal protein l48, mitochondrial (23 kDa, Protein from Homo sapiens)
28s ribosomal protein s17, mitochondrial (14 kDa, Protein from Homo sapiens)
39s ribosomal protein l40, mitochondrial (24 kDa, Protein from Homo sapiens)
28s ribosomal protein s14, mitochondrial (15 kDa, Protein from Homo sapiens)
Magnesium ion (24 Da, Ligand)
39s ribosomal protein l17, mitochondrial (20 kDa, Protein from Homo sapiens)
39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Homo sapiens)
12s mitochondrial rrna (306 kDa, RNA from Homo sapiens)
28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Homo sapiens)
28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Homo sapiens)
39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Homo sapiens)
Ribosomal protein 63, mitochondrial (12 kDa, Protein from Homo sapiens)
28s ribosomal protein s24, mitochondrial (19 kDa, Protein from Homo sapiens)
39s ribosomal protein l27, mitochondrial (16 kDa, Protein from Homo sapiens)
Aurora kinase a-interacting protein (22 kDa, Protein from Homo sapiens)
39s ribosomal protein l10, mitochondrial (29 kDa, Protein from Homo sapiens)
Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from Homo sapiens)
28s ribosomal protein s23, mitochondrial (21 kDa, Protein from Homo sapiens)
39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Homo sapiens)
28s ribosomal protein s34, mitochondrial (25 kDa, Protein from Homo sapiens)
28s ribosomal protein s2, mitochondrial (33 kDa, Protein from Homo sapiens)
28s ribosomal protein s27, mitochondrial (47 kDa, Protein from Homo sapiens)
28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Homo sapiens)
39s ribosomal protein l43, mitochondrial (23 kDa, Protein from Homo sapiens)
39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
Mrna (6 kDa, RNA from Homo sapiens)

[Show more]

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Display: Statistics

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EMDB [2]

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Select the script type:

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