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sample_name:"40S ribosomal protein S17" AND release_date:[2023-01-01T00:00:00Z TO 2023-12-31T23:59:59Z]
CryoEM structure of wheat 40S ribosomal subunit, head domain
Release date: Dec. 27, 2023
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 8r57
Q-score: 0.58
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 8r57
Q-score: 0.58
Kravchenko OV, Baymukhametov TN, Afonina ZA, Vassilenko KS
Int J Mol Sci (2023) 24 [ DOI: doi:10.3390/ijms242417453 Pubmed: 38139282 ]
Sample:
- 40s ribosomal protein s3 (25 kDa, Protein from Triticum aestivum)
- Rna (458-mer) (584 kDa, RNA from Triticum aestivum)
- Small ribosomal subunit from triticum aestivum (common wheat) (Complex from Triticum aestivum)
- Ribosomal protein s20 (14 kDa, Protein from Triticum aestivum)
- Ubiquitin-like domain-containing protein (17 kDa, Protein from Triticum aestivum)
- Potassium ion (39 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Plectin/es10 n-terminal domain-containing protein (20 kDa, Protein from Triticum aestivum)
- Putative ribosomal protein s18 (17 kDa, Protein from Triticum aestivum)
- Water (18 Da, Ligand)
- 40s ribosomal protein s16 (16 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s17 (16 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us14 (6 kDa, Protein from Triticum aestivum)
- Ribosomal protein rack1 subfamily. wd repeat g protein beta family (36 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s12 (15 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us7c (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s15 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s28 (7 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s25 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s19 (17 kDa, Protein from Triticum aestivum)
CryoEM structure of wheat 40S ribosomal subunit, body domain
Release date: Dec. 27, 2023
Resolution: 2.34 Å
EM Method: Single-particle
Fitted PDBs: 8r6f
Q-score: 0.6
Resolution: 2.34 Å
EM Method: Single-particle
Fitted PDBs: 8r6f
Q-score: 0.6
Kravchenko OV, Baymukhametov TN, Afonina ZA, Vassilenko KS
Int J Mol Sci (2023) 24 [ DOI: doi:10.3390/ijms242417453 Pubmed: 38139282 ]
Sample:
- Potassium ion (39 Da, Ligand)
- 40s ribosomal protein s6 (28 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s4 (30 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us15 n-terminal domain-containing protein (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s8 (25 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit from triticum aestivum (common wheat) (Complex from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- S5 drbm domain-containing protein (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s7 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s26 (15 kDa, Protein from Triticum aestivum)
- Large ribosomal subunit protein el41z/el41y/el41x/el41w/el41v (3 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s17 (16 kDa, Protein from Triticum aestivum)
- Genome assembly, chromosome: ii (8 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s30 (6 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us17 n-terminal domain-containing protein (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s27 (9 kDa, Protein from Triticum aestivum)
- 30s ribosomal protein s4, chloroplastic (22 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- Rna (1177-mer) (584 kDa, RNA from Triticum aestivum)
- 30s ribosomal protein s11, chloroplastic (16 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein us2 (33 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s23 (15 kDa, Protein from Triticum aestivum)
- Small ribosomal subunit protein es1 (30 kDa, Protein from Triticum aestivum)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us8c (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein s24 (15 kDa, Protein from Triticum aestivum)
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : WILD TYPE
Release date: Dec. 20, 2023
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8a3w
Q-score: 0.607
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8a3w
Q-score: 0.607
To Be Published
Sample:
- 60s ribosomal protein l18a (20 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l28 (16 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s3 (24 kDa, Protein from Leishmania major strain Friedlin)
- Putative ribosomal protein l1a (41 kDa, Protein from Leishmania major strain Friedlin)
- Putative rna binding protein (25 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l36 (11 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l34 (19 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s8 (24 kDa, Protein from Leishmania major strain Friedlin)
- Lsua_rrna_chain_1 (576 kDa, RNA from Leishmania major strain Friedlin)
- E-site_trna_chain_s4 (6 kDa, RNA from Leishmania major strain Friedlin)
- Water (18 Da, Ligand)
- Putative 40s ribosomal protein s13 (17 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l7a (29 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l37a (10 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s10 (18 kDa, Protein from Leishmania major strain Friedlin)
- Putative ribosomal protein s20 (13 kDa, Protein from Leishmania major strain Friedlin)
- Ribosomal protein l37 (9 kDa, Protein from Leishmania major strain Friedlin)
- Ssu_rrna_chain_s1 (710 kDa, RNA from Leishmania major strain Friedlin)
- 40s ribosomal protein s14 (15 kDa, Protein from Leishmania major strain Friedlin)
- Sr2_chain_4 (59 kDa, RNA from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l35 (15 kDa, Protein from Leishmania major strain Friedlin)
- 5s_rrna_chain_8 (39 kDa, RNA from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s11 (20 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s6 (28 kDa, Protein from Leishmania major strain Friedlin)
- Sodium ion (22 Da, Ligand)
- 60s ribosomal protein l27 (15 kDa, Protein from Leishmania major strain Friedlin)
- Potassium ion (39 Da, Ligand)
- Putative 60s ribosomal protein l23a (16 kDa, Protein from Leishmania major strain Friedlin)
- El13_chain_i (24 kDa, Protein from Leishmania major strain Friedlin)
- Putative ribosomal protein l3 (47 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s23 (15 kDa, Protein from Leishmania major strain Friedlin)
- Sr1_chain_3 (69 kDa, RNA from Leishmania major strain Friedlin)
- Putative ribosomal protein l35a (16 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l26 (16 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l30 (11 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s27-1 (9 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l17 (19 kDa, Protein from Leishmania major strain Friedlin)
- 5.8s_rrna_chain_7 (54 kDa, RNA from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l19 (28 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l22 (15 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l18 (22 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal subunit protein l31 (21 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s25 (13 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s15a (14 kDa, Protein from Leishmania major strain Friedlin)
- Sr4_chain_5 (43 kDa, RNA from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein l14 (19 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l23 (14 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s17 (16 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s16 (16 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l11 (21 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l44 (12 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l5 (34 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l39 (6 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l41 (4 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s24 (15 kDa, Protein from Leishmania major strain Friedlin)
- Lsub_rrna_chain_2 (491 kDa, RNA from Leishmania major strain Friedlin)
- 40s ribosomal protein s5 (21 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s33 (9 kDa, Protein from Leishmania major strain Friedlin)
- Putative ribosomal protein l24 (14 kDa, Protein from Leishmania major strain Friedlin)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s3a (30 kDa, Protein from Leishmania major strain Friedlin)
- Sr6_chain_6 (23 kDa, RNA from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l21 (18 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s18 (17 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l9 (21 kDa, Protein from Leishmania major strain Friedlin)
- Putative ribosomal protein l38 (9 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l6 (21 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s7 (23 kDa, Protein from Leishmania major strain Friedlin)
- Cryo-em structure of leishmania major 80s ribosome wild type (Complex from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l13a (25 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s21 (17 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein sa (27 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s4 (30 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s2 (28 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l29 (8 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s9 (22 kDa, Protein from Leishmania major strain Friedlin)
- Zinc ion (65 Da, Ligand)
- Putative 60s ribosomal protein l27a/l29 (16 kDa, Protein from Leishmania major strain Friedlin)
- Putative ribosomal protein s29 (6 kDa, Protein from Leishmania major strain Friedlin)
- Putative 40s ribosomal protein s15 (17 kDa, Protein from Leishmania major strain Friedlin)
- 60s ribosomal protein l32 (15 kDa, Protein from Leishmania major strain Friedlin)
- Small ribosomal subunit protein rack1 (34 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s26 (12 kDa, Protein from Leishmania major strain Friedlin)
- Ribosomal protein l15 (24 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s19-like protein (18 kDa, Protein from Leishmania major strain Friedlin)
- Ul30_chain_c (28 kDa, Protein from Leishmania major strain Friedlin)
- 40s ribosomal protein s30 (7 kDa, Protein from Leishmania major strain Friedlin)
- Putative 60s ribosomal protein l2 (28 kDa, Protein from Leishmania major strain Friedlin)
Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)
Release date: Dec. 6, 2023
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8jdj
Q-score: 0.594
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8jdj
Q-score: 0.594
Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T
Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]
Sample:
- 60s ribosomal protein l8 (28 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l7 (29 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18a (20 kDa, Protein from Homo sapiens)
- Mrna (4 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l38 (8 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l28 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l24 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l31 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l14 (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l35 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l9 (21 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s19 (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l26 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l4 (47 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- Trna(asp) (24 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l23a (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (13 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l37 (11 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l3 (46 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- 28s ribosomal rna (1 MDa, RNA from Homo sapiens)
- 60s ribosomal protein l23 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13a (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l27 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l29 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l10-like (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l32 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18 (21 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s18 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l30 (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l39 (6 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36a (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- 5.8s ribosomal rna (50 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l5 (34 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l11 (20 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- The complex of human 80s ribosome with mrna and a-, p- site trna (Complex from Homo sapiens)
- 60s ribosomal protein l7a (30 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36 (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l15 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l6 (32 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l27a (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l37a (10 kDa, Protein from Homo sapiens)
- 18s ribosomal rna (603 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l21 (18 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s30 (6 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l19 (23 kDa, Protein from Homo sapiens)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l34 (13 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (38 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l35a (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l22 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l17 (21 kDa, Protein from Homo sapiens)
Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
Release date: Dec. 6, 2023
Resolution: 2.26 Å
EM Method: Single-particle
Fitted PDBs: 8jdk
Q-score: 0.577
Resolution: 2.26 Å
EM Method: Single-particle
Fitted PDBs: 8jdk
Q-score: 0.577
Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T
Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]
Sample:
- 60s ribosomal protein l8 (28 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l7 (29 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18a (20 kDa, Protein from Homo sapiens)
- Mrna (4 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l38 (8 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l28 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l24 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l31 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l14 (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l35 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l9 (21 kDa, Protein from Homo sapiens)
- Trna (asp) (24 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s19 (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l26 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l4 (47 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l23a (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (13 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l37 (11 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l3 (46 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- 28s ribosomal rna (1 MDa, RNA from Homo sapiens)
- 60s ribosomal protein l23 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13a (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l27 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l29 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l10-like (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l32 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18 (21 kDa, Protein from Homo sapiens)
- Alpha-d-mannopyranose (180 Da, Ligand)
- 40s ribosomal protein s18 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l30 (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l39 (6 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36a (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- 5.8s ribosomal rna (50 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l5 (34 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l11 (20 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- The complex of human 80s ribosome with mrna and a-, p- site trna (Complex from Homo sapiens)
- 60s ribosomal protein l7a (30 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36 (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l15 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l6 (32 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l27a (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l37a (10 kDa, Protein from Homo sapiens)
- 18s ribosomal rna (603 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l21 (18 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s30 (6 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l19 (23 kDa, Protein from Homo sapiens)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l34 (13 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (38 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l35a (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l22 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l17 (21 kDa, Protein from Homo sapiens)
Release date: Dec. 6, 2023
Resolution: 2.42 Å
EM Method: Single-particle
Fitted PDBs: 8jdl
Q-score: 0.573
Resolution: 2.42 Å
EM Method: Single-particle
Fitted PDBs: 8jdl
Q-score: 0.573
Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T
Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]
Sample:
- 60s ribosomal protein l8 (28 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l7 (29 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18a (20 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l38 (8 kDa, Protein from Homo sapiens)
- Trna (tyr) (24 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l28 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l24 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l31 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l14 (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l35 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l9 (21 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s19 (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l26 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l4 (47 kDa, Protein from Homo sapiens)
- The complex of human 80s ribosome with mrna and p- site trna (Complex from Homo sapiens)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l23a (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (13 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l37 (11 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l3 (46 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- 28s ribosomal rna (1 MDa, RNA from Homo sapiens)
- 60s ribosomal protein l23 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13a (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l27 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l29 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l10-like (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l32 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18 (21 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s18 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l30 (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l39 (6 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36a (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- 5.8s ribosomal rna (50 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l5 (34 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l11 (20 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l7a (30 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36 (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l15 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l6 (32 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l27a (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l37a (10 kDa, Protein from Homo sapiens)
- 18s ribosomal rna (603 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l21 (18 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s30 (6 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l19 (23 kDa, Protein from Homo sapiens)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l34 (13 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (38 kDa, RNA from Homo sapiens)
- Beta-d-galactopyranose (180 Da, Ligand)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- Mrna (4 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l35a (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l22 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l17 (21 kDa, Protein from Homo sapiens)
Release date: Dec. 6, 2023
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 8jdm
Q-score: 0.557
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 8jdm
Q-score: 0.557
Zhao X, Ma D, Ishiguro K, Saito H, Akichika S, Matsuzawa I, Mito M, Irie T, Ishibashi K, Wakabayashi K, Sakaguchi Y, Yokoyama T, Mishima Y, Shirouzu M, Iwasaki S, Suzuki T, Suzuki T
Cell (2023) 186 pp. 5517- [ Pubmed: 37992713 DOI: doi:10.1016/j.cell.2023.10.026 ]
Sample:
- 60s ribosomal protein l5 (34 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l3 (46 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 5s ribosomal rna (38 kDa, RNA from Homo sapiens)
- Beta-d-galactopyranose (180 Da, Ligand)
- 60s ribosomal protein l37a (10 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s18 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l38 (8 kDa, Protein from Homo sapiens)
- 5.8s ribosomal rna (50 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18a (20 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l17 (21 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l9 (21 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13a (23 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l7 (29 kDa, Protein from Homo sapiens)
- Mrna (4 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l11 (20 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l10-like (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s30 (6 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l21 (18 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (13 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l32 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- 18s ribosomal rna (603 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l27 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36 (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l14 (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l6 (32 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l18 (21 kDa, Protein from Homo sapiens)
- 28s ribosomal rna (1 MDa, RNA from Homo sapiens)
- 60s ribosomal protein l27a (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l26 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l19 (23 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l22 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l23 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l34 (13 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l31 (14 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l36a (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l35 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l35a (12 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- The complex of human 80s ribosome with mrna and a-, p- site trna (rotated state) (Complex from Homo sapiens)
- 60s ribosomal protein l15 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l30 (12 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l13 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l24 (17 kDa, Protein from Homo sapiens)
- Trna (tyr) (24 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l29 (17 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l8 (28 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l37 (11 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s19 (16 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l39 (6 kDa, Protein from Homo sapiens)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l4 (47 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l28 (15 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l23a (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l7a (30 kDa, Protein from Homo sapiens)
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Release date: Nov. 29, 2023
Resolution: 2.47 Å
EM Method: Single-particle
Fitted PDBs: 8ova
Q-score: 0.63
Resolution: 2.47 Å
EM Method: Single-particle
Fitted PDBs: 8ova
Q-score: 0.63
Rajan KS, Madmoni H, Bashan A, Taoka M, Aryal S, Nobe Y, Doniger T, Galili Kostin B, Blumberg A, Cohen-Chalamish S, Schwartz S, Rivalta A, Zimmerman E, Unger R, Isobe T, Yonath A, Michaeli S
Nat Commun (2023) 14 pp. 7462-7462 [ Pubmed: 37985661 DOI: doi:10.1038/s41467-023-43263-6 ]
Sample:
- 40s ribosomal protein s10, putative (19 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s23, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l28, putative (16 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l37a, putative (10 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l18a (20 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal subunit protein l31, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l29 (8 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s30 (7 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l32, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l7, putative (29 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l9, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l38, putative (9 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s2, putative (28 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l27 (15 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l36, putative (12 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s8 (25 kDa, Protein from Trypanosoma brucei brucei)
- Water (18 Da, Ligand)
- 40s ribosomal protein s26 (12 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l34, putative (19 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s24 (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l35a, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal proteins s11, putative (20 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s21, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l22, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l23a (18 kDa, Protein from Trypanosoma brucei brucei)
- Sodium ion (22 Da, Ligand)
- Ssu rrna (734 kDa, RNA from Trypanosoma brucei brucei)
- Ubiquitin-60s ribosomal protein l40 (16 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s7 (23 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l35, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- Potassium ion (39 Da, Ligand)
- 60s ribosomal protein l27a (16 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l13a, putative (25 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l7a (30 kDa, Protein from Trypanosoma brucei brucei)
- Cryo-em structure of trypanosoma brucei procyclic form 80s ribosome : parental strain (Complex from Trypanosoma brucei brucei)
- 60s ribosomal protein l10, putative (24 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s27, putative (9 kDa, Protein from Trypanosoma brucei brucei)
- Rna-binding protein (30 kDa, Protein from Trypanosoma brucei brucei)
- Lsua rrna (619 kDa, RNA from Trypanosoma brucei brucei)
- 60s ribosomal protein l24, putative (14 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l44 (12 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l2, putative (28 kDa, Protein from Trypanosoma brucei brucei)
- 5s rrna (38 kDa, RNA from Trypanosoma brucei brucei)
- 40s ribosomal protein sa (31 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s15, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein l14, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s25 (12 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s3, putative (24 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s14 (15 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s6 (28 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l4 (41 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l18 (21 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l15 (26 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l11, putative (22 kDa, Protein from Trypanosoma brucei brucei)
- Lsub rrna (494 kDa, RNA from Trypanosoma brucei brucei)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l30 (11 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s16, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- Srrna-4 (43 kDa, RNA from Trypanosoma brucei brucei)
- 60s ribosomal protein l6, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l17, putative (19 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s5, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l37 (10 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein s19, putative (18 kDa, Protein from Trypanosoma brucei brucei)
- Srrna-1 (69 kDa, RNA from Trypanosoma brucei brucei)
- 40s ribosomal protein s3a (29 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s33, putative (11 kDa, Protein from Trypanosoma brucei brucei)
- Us14 (6 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l19, putative (29 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s12 (15 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s13, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s18, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- Srrna-2 (59 kDa, RNA from Trypanosoma brucei brucei)
- 5.8s rrna (67 kDa, RNA from Trypanosoma brucei brucei)
- 60s ribosomal protein l13 (25 kDa, Protein from Trypanosoma brucei brucei)
- E-site trna (6 kDa, RNA from Trypanosoma brucei brucei)
- Srrna-6 (24 kDa, RNA from Trypanosoma brucei brucei)
- 60s ribosomal protein l39, putative (6 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s15a, putative (14 kDa, Protein from Trypanosoma brucei brucei)
- Probable 40s ribosomal protein s9 (22 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l26, putative (16 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l41 (4 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s4 (30 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein s10 (13 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l23, putative (14 kDa, Protein from Trypanosoma brucei brucei)
- Zinc ion (65 Da, Ligand)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l21e, putative (18 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l3, mitochondrial, putative (48 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s17, putative (16 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l5, putative (34 kDa, Protein from Trypanosoma brucei brucei)
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Release date: Nov. 29, 2023
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8ove
Q-score: 0.605
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8ove
Q-score: 0.605
Rajan KS, Madmoni H, Bashan A, Taoka M, Aryal S, Nobe Y, Doniger T, Galili Kostin B, Blumberg A, Cohen-Chalamish S, Schwartz S, Rivalta A, Zimmerman E, Unger R, Isobe T, Yonath A, Michaeli S
Nat Commun (2023) 14 pp. 7462-7462 [ Pubmed: 37985661 DOI: doi:10.1038/s41467-023-43263-6 ]
Sample:
- Srrna 2 (59 kDa, RNA from Trypanosoma brucei brucei)
- Srrna 6 (24 kDa, RNA from Trypanosoma brucei brucei)
- 40s ribosomal protein s24 (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l35a, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 80s ribosome (Complex from Trypanosoma brucei brucei)
- Ssu rrna (734 kDa, RNA from Trypanosoma brucei brucei)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l3, mitochondrial, putative (48 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l13a, putative (25 kDa, Protein from Trypanosoma brucei brucei)
- Rna-binding protein (30 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s15a, putative (14 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s7 (23 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s14 (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l39, putative (6 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l7a (30 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l17, putative (19 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l5, putative (34 kDa, Protein from Trypanosoma brucei brucei)
- Srrna 4 (43 kDa, RNA from Trypanosoma brucei brucei)
- Ribosomal protein l41 (4 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s3a (29 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein l14, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l11, putative (22 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l23a (18 kDa, Protein from Trypanosoma brucei brucei)
- 5.8s rrna (67 kDa, RNA from Trypanosoma brucei brucei)
- Lus_alpha rrna (619 kDa, RNA from Trypanosoma brucei brucei)
- 60s ribosomal protein l32, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l21e, putative (18 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein sa (31 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l29 (8 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l13 (25 kDa, Protein from Trypanosoma brucei brucei)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l15 (26 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s3, putative (24 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l27a (16 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein s19, putative (18 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s18, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l35, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s6 (28 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l22, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s23, putative (15 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l30 (11 kDa, Protein from Trypanosoma brucei brucei)
- Potassium ion (39 Da, Ligand)
- 60s ribosomal protein l6, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l9, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l34, putative (19 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s17, putative (16 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s25 (12 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l19, putative (29 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l2, putative (28 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l36, putative (12 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal proteins s11, putative (20 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s15, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s13, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 5s rrna (38 kDa, RNA from Trypanosoma brucei brucei)
- 40s ribosomal protein s21, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l27 (15 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s5, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- Sodium ion (22 Da, Ligand)
- Probable 40s ribosomal protein s9 (22 kDa, Protein from Trypanosoma brucei brucei)
- His-thr-cys-thr (461 Da, Protein from Trypanosoma brucei brucei)
- Srrna 1 (69 kDa, RNA from Trypanosoma brucei brucei)
- 40s ribosomal protein s27, putative (9 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l37a, putative (10 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s2, putative (28 kDa, Protein from Trypanosoma brucei brucei)
- Water (18 Da, Ligand)
- 40s ribosomal protein s33, putative (11 kDa, Protein from Trypanosoma brucei brucei)
- E-site trna (6 kDa, RNA from Trypanosoma brucei brucei)
- Lsub rrna (494 kDa, RNA from Trypanosoma brucei brucei)
- 60s ribosomal protein l18 (21 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein s10 (13 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s26 (12 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l10, putative (24 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s30 (7 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s16, putative (17 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l38, putative (9 kDa, Protein from Trypanosoma brucei brucei)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l18a (20 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s10, putative (19 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l28, putative (16 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l23, putative (14 kDa, Protein from Trypanosoma brucei brucei)
- Putative ribosomal protein s29 (6 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal subunit protein l31, putative (21 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s8 (25 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l37 (10 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l7, putative (29 kDa, Protein from Trypanosoma brucei brucei)
- 40s ribosomal protein s4 (30 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l24 (14 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l44 (12 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l26, putative (16 kDa, Protein from Trypanosoma brucei brucei)
- 60s ribosomal protein l4 (41 kDa, Protein from Trypanosoma brucei brucei)
Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunit
Release date: Oct. 18, 2023
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 8ppk
Q-score: 0.489
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 8ppk
Q-score: 0.489
Schubert K, Karousis ED, Ban I, Lapointe CP, Leibundgut M, Baumlin E, Kummerant E, Scaiola A, Schonhut T, Ziegelmuller J, Puglisi JD, Muhlemann O, Ban N
Mol Cell (2023) 83 pp. 3546-3557.e8 [ Pubmed: 37802027 DOI: doi:10.1016/j.molcel.2023.09.002 ]
Sample:
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein es19 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- Bat-hp-cov nsp1 - eif1 - 40s complex (Complex from Homo sapiens)
- Nsp1 (21 kDa, Protein from Bat Hp-betacoronavirus/Zhejiang2013)
- 60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us13 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (13 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s12 (14 kDa, Protein from Homo sapiens)
- 18s rrna (603 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- Unknown atom or ion (Ligand)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Eukaryotic translation initiation factor 1 (12 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein es30 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- Ubiquitin-40s ribosomal protein s27a (18 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)