Rat 80S ribosome purified from brain RNA granules. Class 1 60S subunit 2_5A resolution.
Anadolu MN, Sun J, Kailasam S, Chalkiadaki K, Krimbacher K, Li JT, Markova T, Jafarnejad SM, Lefebvre F, Ortega J, Gkogkas CG, Sossin WS
J.Neurosci. (2023) 43 pp. 2440-2459 [ Pubmed: 36849416 DOI: doi:10.1523/JNEUROSCI.1002-22.2023 ]
Rat 80S ribosome purified from brain RNA granules. Class 2 60S subunit.
Anadolu MN, Sun J, Kailasam S, Chalkiadaki K, Krimbacher K, Li JT, Markova T, Jafarnejad SM, Lefebvre F, Ortega J, Gkogkas CG, Sossin WS
J.Neurosci. (2023) 43 pp. 2440-2459 [ Pubmed: 36849416 DOI: doi:10.1523/JNEUROSCI.1002-22.2023 ]
eEF1A(GDP)aa-tRNA stalled on the rabbit 80S ribosome by ternatin-4
Juette MF, Carelli JD, Rundlet EJ, Brown A, Shao S, Ferguson A, Wasserman MR, Holm M, Taunton J, Blanchard SC
eLife (2022) 11 [ Pubmed: 36264623 DOI: doi:10.7554/eLife.81608 ]
- Eef1a(gdp)aa-trna stalled on the rabbit 80s ribosome by ternatin-4 (Complex from Oryctolagus cuniculus)
- Peptidyl-trna (Complex from Oryctolagus cuniculus)
- 40s subunit (Complex from Oryctolagus cuniculus)
- 60s subunit (Complex from Oryctolagus cuniculus)
- Eef1a(gdp)-aatrna (Complex from Oryctolagus cuniculus)
- Deacyl-trna (Complex from Oryctolagus cuniculus)
eEF1A(GDP)aa-tRNA stalled on the human 80S ribosome by didemnin B
Juette MF, Carelli JD, Rundlet EJ, Brown A, Shao S, Ferguson A, Wasserman MR, Holm M, Taunton J, Blanchard SC
eLife (2022) 11 [ Pubmed: 36264623 DOI: doi:10.7554/eLife.81608 ]
- 40s subunit (Complex from Homo sapiens)
- 60s subunit (Complex from Homo sapiens)
- Met-trnafmet (Complex from Escherichia coli)
- Eef1a(gdp)aa-trna stalled on the human 80s ribosome by didemnin b (Complex)
- Eef1a(gdp) (Complex from Oryctolagus cuniculus)
- Phe-trnaphe (Complex from Escherichia coli)
eEF1A(GDP)aa-tRNA stalled on the human 80S ribosome by ternatin-4
Juette MF, Carelli JD, Rundlet EJ, Brown A, Shao S, Ferguson A, Wasserman MR, Holm M, Taunton J, Blanchard SC
eLife (2022) 11 [ Pubmed: 36264623 DOI: doi:10.7554/eLife.81608 ]
- 40s subunit (Complex from Homo sapiens)
- 60s subunit (Complex from Homo sapiens)
- Met-trnafmet (Complex from Escherichia coli)
- Eef1a(gdp) (Complex from Oryctolagus cuniculus)
- Eef1a(gdp)aa-trna stalled on the human 80s ribosome by ternatin-4 (Complex)
- Phe-trnaphe (Complex from Escherichia coli)
Yeast FAP-80S Complex in Rotated State - Body 1 - 60S subunit
Li S, Ikeuchi K, Kato M, Buschauer R, Sugiyama T, Adachi S, Kusano H, Natsume T, Berninghausen O, Matsuo Y, Becker T, Beckmann R, Inada T
Mol Cell (2022) 82 pp. 3424-3437.e8 [ DOI: doi:10.1016/j.molcel.2022.08.018 Pubmed: 36113412 ]
Structure of Candida albicans 80S ribosome in complex with cycloheximide
Resolution: 2.56 Å
EM Method: Single-particle
Fitted PDBs: 7q08
Q-score: 0.517
Zgadzay Y, Kolosova O, Stetsenko A, Wu C, Bruchlen D, Usachev K, Validov S, Jenner L, Rogachev A, Yusupova G, Sachs MS, Guskov A, Yusupov M
Sci Adv (2022) 8 pp. eabn1062-eabn1062 [ Pubmed: 35613268 DOI: doi:10.1126/sciadv.abn1062 ]
- Ribosomal 40s subunit protein s16a (15 kDa, Protein from Candida albicans SC5314)
- Habp4_pai-rbp1 domain-containing protein (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l2a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l21a (18 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s4 (29 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s6 (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s19a (16 kDa, Protein from Candida albicans SC5314)
- Candida albicans 80s ribosome (3 MDa, Complex from Candida albicans SC5314)
- 60s ribosomal protein l6 (19 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l24a (17 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l13 (23 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s3 (27 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s26 (13 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l17b (21 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l8 (28 kDa, Protein from Candida albicans SC5314)
- Ubiquitin-ribosomal 40s subunit protein s31 fusion protein (22 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s25 (11 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l7a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l4b (39 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s14b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l5 (34 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s13 (16 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s24 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l18a (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s11a (17 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s23b (16 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s21 (9 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s7 (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l31b (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s17b (15 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s8 (22 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l43a (10 kDa, Protein from Candida albicans SC5314)
- Rpl40bp (6 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l34b (13 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l39 (6 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s27 (8 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s2 (26 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein el41 (3 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l35a (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l9b (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s9b (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l38 (8 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s28b (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l30 (11 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l27 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l11b (19 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s10a (13 kDa, Protein from Candida albicans SC5314)
- 5.8s ribosomal rna (50 kDa, RNA from Candida albicans SC5314)
- Ribosomal 40s subunit protein s20 (13 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s30 (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l19 (21 kDa, Protein from Candida albicans SC5314)
- 18s ribosomal rna (575 kDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l14b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l32 (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l3 (44 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s22-a (14 kDa, Protein from Candida albicans SC5314)
- 25s ribosomal rna (1 MDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l10 (25 kDa, Protein from Candida albicans SC5314)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s18b (17 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l29 (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l28 (16 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l37 (10 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s29a (6 kDa, Protein from Candida albicans SC5314)
- 4-{(2r)-2-[(1s,3s,5s)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione (281 Da, Ligand)
- 5s ribosomal rna (38 kDa, RNA from Candida albicans SC5314)
- 40s ribosomal protein s12 (15 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s0 (28 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l42a (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l15 (24 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l23b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s5 (25 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l20 (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l22b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l33a (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l25 (15 kDa, Protein from Candida albicans SC5314)
- Zinc ion (65 Da, Ligand)
- Spermidine (145 Da, Ligand)
- Ribosomal 40s subunit protein s15 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l26b (14 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s1 (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l16a (22 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l36 (11 kDa, Protein from Candida albicans SC5314)
Cryo-EM map of the Candida albicans 80S ribosome in complex with blasticidin s
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 7q0r
Q-score: 0.448
Zgadzay Y, Kolosova O, Stetsenko A, Wu C, Bruchlen D, Usachev K, Validov S, Jenner L, Rogachev A, Yusupova G, Sachs MS, Guskov A, Yusupov M
Sci Adv (2022) 8 pp. eabn1062-eabn1062 [ Pubmed: 35613268 DOI: doi:10.1126/sciadv.abn1062 ]
- Ribosomal 60s subunit protein l9b (21 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l27 (15 kDa, Protein from Candida albicans SC5314)
- 5s ribosomal rna (38 kDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l22b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l16a (22 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l34b (13 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s22-a (14 kDa, Protein from Candida albicans SC5314)
- Habp4_pai-rbp1 domain-containing protein (29 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s12 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s2 (26 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s23b (16 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l18a (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l2a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l24a (17 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l37 (10 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l5 (34 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l43a (10 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s28b (7 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l36 (11 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l31b (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l4b (39 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s26 (13 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l39 (6 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l33a (12 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l8 (28 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l7a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s3 (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l30 (11 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s0 (28 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s25 (11 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l14b (14 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l41 (3 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l29 (7 kDa, Protein from Candida albicans SC5314)
- Spermidine (145 Da, Ligand)
- 5.8s ribosomal rna (50 kDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l17b (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l23b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s13 (16 kDa, Protein from Candida albicans SC5314)
- Mixture of the endogenous e-trna (24 kDa, RNA from Candida albicans SC5314)
- Ribosomal 40s subunit protein s11a (17 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s10a (13 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s20 (13 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l28 (16 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l15 (24 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l13 (23 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l21a (18 kDa, Protein from Candida albicans SC5314)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Candida albicans SC5314)
- Rpl40bp (6 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s14b (14 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l20 (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l10 (25 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s6 (27 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s1 (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s15 (15 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s27 (8 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s19a (16 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s7 (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l35a (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l38 (8 kDa, Protein from Candida albicans SC5314)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s8 (22 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l26b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s17b (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l32 (14 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s4 (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l11b (19 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s9b (21 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s21 (9 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s29a (6 kDa, Protein from Candida albicans SC5314)
- 18s ribosomal rna (575 kDa, RNA from Candida albicans SC5314)
- 60s ribosomal protein l6 (19 kDa, Protein from Candida albicans SC5314)
- Blasticidin s (422 Da, Ligand)
- Ribosomal 40s subunit protein s5 (25 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s16a (15 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l3 (44 kDa, Protein from Candida albicans SC5314)
- Candida albicans 80s ribosome (3 MDa, Complex from Candida albicans SC5314)
- 25s ribosomal rna (1 MDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l42a (12 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s30 (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l25 (15 kDa, Protein from Candida albicans SC5314)
- Ubiquitin-ribosomal 40s subunit protein s31 fusion protein (22 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s24 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l19 (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s18b (17 kDa, Protein from Candida albicans SC5314)
Cryo-EM map of the vacant Candida albicans 80S ribosome
Resolution: 2.32 Å
EM Method: Single-particle
Fitted PDBs: 7pzy
Q-score: 0.53
Zgadzay Y, Kolosova O, Stetsenko A, Wu C, Bruchlen D, Usachev K, Validov S, Jenner L, Rogachev A, Yusupova G, Sachs MS, Guskov A, Yusupov M
Sci Adv (2022) 8 pp. eabn1062-eabn1062 [ Pubmed: 35613268 DOI: doi:10.1126/sciadv.abn1062 ]
- Ribosomal 40s subunit protein s16a (15 kDa, Protein from Candida albicans SC5314)
- Habp4_pai-rbp1 domain-containing protein (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l2a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l21a (18 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s4 (29 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s6 (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s19a (16 kDa, Protein from Candida albicans SC5314)
- Candida albicans 80s ribosome (3 MDa, Complex from Candida albicans SC5314)
- 60s ribosomal protein l6 (19 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l24a (17 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l13 (23 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s3 (27 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s26 (13 kDa, Protein from Candida albicans SC5314)
- Water (18 Da, Ligand)
- Ribosomal 60s subunit protein l17b (21 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l8 (28 kDa, Protein from Candida albicans SC5314)
- Mixture of endogenous e-trnas (24 kDa, RNA from Candida albicans SC5314)
- Ubiquitin-ribosomal 40s subunit protein s31 fusion protein (22 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s25 (11 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l7a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l4b (39 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s14b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l5 (34 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s13 (16 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s24 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l18a (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s11a (17 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s23b (16 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s21 (9 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s7 (21 kDa, Protein from Candida albicans SC5314)
- 1,4-diaminobutane (88 Da, Ligand)
- Ribosomal 60s subunit protein l31b (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s17b (15 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s8 (22 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l43a (10 kDa, Protein from Candida albicans SC5314)
- Rpl40bp (6 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l34b (13 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l39 (6 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s27 (8 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s2 (26 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l35a (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l9b (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s9b (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l38 (8 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s28b (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l30 (11 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l27 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l11b (19 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s10a (13 kDa, Protein from Candida albicans SC5314)
- 5.8s ribosomal rna (50 kDa, RNA from Candida albicans SC5314)
- Ribosomal 40s subunit protein s20 (13 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s30 (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l19 (21 kDa, Protein from Candida albicans SC5314)
- 18s ribosomal rna (575 kDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l14b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l32 (14 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s22-a (14 kDa, Protein from Candida albicans SC5314)
- 25s ribosomal rna (1 MDa, RNA from Candida albicans SC5314)
- 60s ribosomal protein l41 (3 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l10 (25 kDa, Protein from Candida albicans SC5314)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s18b (17 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l29 (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l28 (16 kDa, Protein from Candida albicans SC5314)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein l37 (10 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s29a (6 kDa, Protein from Candida albicans SC5314)
- 5s ribosomal rna (38 kDa, RNA from Candida albicans SC5314)
- 40s ribosomal protein s12 (15 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s0 (28 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l42a (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l15 (24 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l23b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s5 (25 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l20 (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l22b (14 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l3 (44 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l33a (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l25 (15 kDa, Protein from Candida albicans SC5314)
- Zinc ion (65 Da, Ligand)
- Spermidine (145 Da, Ligand)
- Ribosomal 40s subunit protein s15 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l26b (14 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s1 (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l16a (22 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l36 (11 kDa, Protein from Candida albicans SC5314)
Cryo-EM map of Candida albicans 80S ribosome in complex with phyllanthoside
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 7q0f
Q-score: 0.521
Zgadzay Y, Kolosova O, Stetsenko A, Wu C, Bruchlen D, Usachev K, Validov S, Jenner L, Rogachev A, Yusupova G, Sachs MS, Guskov A, Yusupov M
Sci Adv (2022) 8 pp. eabn1062-eabn1062 [ Pubmed: 35613268 DOI: doi:10.1126/sciadv.abn1062 ]
- Ribosomal 40s subunit protein s16a (15 kDa, Protein from Candida albicans SC5314)
- Habp4_pai-rbp1 domain-containing protein (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l2a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l21a (18 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s4 (29 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s6 (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s19a (16 kDa, Protein from Candida albicans SC5314)
- Candida albicans 80s ribosome (3 MDa, Complex from Candida albicans SC5314)
- 60s ribosomal protein l6 (19 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l24a (17 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l13 (23 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s3 (27 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s26 (13 kDa, Protein from Candida albicans SC5314)
- 5.8s ribosomal rna (50 kDa, RNA from Candida albicans)
- Ribosomal 60s subunit protein l17b (21 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l8 (28 kDa, Protein from Candida albicans SC5314)
- 3-o-acetyl-2-o-(3-o-acetyl-6-deoxy-beta-d-glucopyranosyl)-6-deoxy-1-o-{[(2r,2's,3a'r,4''s,5''r,6's,7a's)-5''-methyl-4''-{[(2e)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-d-glucopyranose (804 Da, Ligand)
- Ubiquitin-ribosomal 40s subunit protein s31 fusion protein (22 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s25 (11 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l7a (27 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l4b (39 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s14b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l5 (34 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s13 (16 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s24 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l18a (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s11a (17 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s23b (16 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s21 (9 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s7 (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l31b (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s17b (15 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s8 (22 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l43a (10 kDa, Protein from Candida albicans SC5314)
- Rpl40bp (6 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l34b (13 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l39 (6 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s27 (8 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s2 (26 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein el41 (3 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l35a (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l9b (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s9b (21 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l38 (8 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s28b (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l30 (11 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l27 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l11b (19 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s10a (13 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s20 (13 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s30 (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l19 (21 kDa, Protein from Candida albicans SC5314)
- 18s ribosomal rna (575 kDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l14b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l32 (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l3 (44 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s22-a (14 kDa, Protein from Candida albicans SC5314)
- 25s ribosomal rna (1 MDa, RNA from Candida albicans SC5314)
- Ribosomal 60s subunit protein l10 (25 kDa, Protein from Candida albicans SC5314)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s18b (17 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l29 (7 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l28 (16 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l37 (10 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s29a (6 kDa, Protein from Candida albicans SC5314)
- 5s ribosomal rna (38 kDa, RNA from Candida albicans SC5314)
- 40s ribosomal protein s12 (15 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s0 (28 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l42a (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal protein l15 (24 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l23b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 40s subunit protein s5 (25 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l20 (20 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l22b (14 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l33a (12 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l25 (15 kDa, Protein from Candida albicans SC5314)
- Zinc ion (65 Da, Ligand)
- Spermidine (145 Da, Ligand)
- Ribosomal 40s subunit protein s15 (15 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l26b (14 kDa, Protein from Candida albicans SC5314)
- 40s ribosomal protein s1 (29 kDa, Protein from Candida albicans SC5314)
- Ribosomal 60s subunit protein l16a (22 kDa, Protein from Candida albicans SC5314)
- 60s ribosomal protein l36 (11 kDa, Protein from Candida albicans SC5314)