EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

sample_name:"IRON/SULFUR CLUSTER" AND natural_source_ncbi_code:"1641165" AND sample_type:"complex" AND xref_links:"interpro" AND author_orcid:"0000-0001-9846-5903" AND assembly_molecular_weight:{500000 TO 1000000] AND release_date:[2020-01-01T00:00:00Z TO 2020-12-31T23:59:59Z] AND author_orcid:"0000-0001-8070-3248"

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EMD-0726

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Structure of PSI from H. hongdechloris grown under white light condition

Release date: Jan. 15, 2020
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 6kmw
Q-score: 0.645

Kato K, Shinoda T, Nagao R, Akimoto S, Suzuki T, Dohmae N, Chen M, Allakhverdiev SI, Shen JR, Akita F, Miyazaki N, Tomo T

Nat Commun (2020) 11 pp. 238-238 [ DOI: doi:10.1038/s41467-019-13898-5 Pubmed: 31932639 ]

Sample:

1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
Beta-carotene (536 Da, Ligand)
Phylloquinone (450 Da, Ligand)
Chlorophyll a isomer (893 Da, Ligand)
Photosystem i reaction center subunit xii (3 kDa, Protein from Halomicronema hongdechloris C2206)
White psi (Complex from Halomicronema hongdechloris C2206)
Photosystem i p700 chlorophyll a apoprotein a1 (84 kDa, Protein from Halomicronema hongdechloris C2206)
Photosystem i reaction center subunit viii (4 kDa, Protein from Halomicronema hongdechloris C2206)
Photosystem i reaction center subunit ii (15 kDa, Protein from Halomicronema hongdechloris C2206)
Unknown ligand (Ligand)
Iron/sulfur cluster (351 Da, Ligand)
Photosystem i reaction center subunit xi (16 kDa, Protein from Halomicronema hongdechloris C2206)
Chlorophyll a (893 Da, Ligand)
Water (18 Da, Ligand)
Photosystem i reaction center subunit iv (7 kDa, Protein from Halomicronema hongdechloris C2206)
Photosystem i p700 chlorophyll a apoprotein a2 (83 kDa, Protein from Halomicronema hongdechloris C2206)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Dodecyl-beta-d-maltoside (510 Da, Ligand)
Calcium ion (40 Da, Ligand)
Photosystem i iron-sulfur center (8 kDa, Protein from Halomicronema hongdechloris C2206)

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