Electron Microscopy Data Bank

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"IRON/SULFUR CLUSTER" AND natural_source_ncbi_code:"329726" AND author_name:"Kashino Y"

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EMD-30420

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Structure of the far-red light utilizing photosystem I of Acaryochloris marina

Release date: March 31, 2021
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7coy
Q-score: 0.553

Hamaguchi T, Kawakami K, Shinzawa-Itoh K, Inoue-Kashino N, Itoh S, Ifuku K, Yamashita E, Maeda K, Yonekura K, Kashino Y

Nat Commun (2021) 12 pp. 2333-2333 [ Pubmed: 33879791 DOI: doi:10.1038/s41467-021-22502-8 ]

Sample:

Phylloquinone (450 Da, Ligand)
Photosystem i protein psa27 (3 kDa, Protein from Acaryochloris marina MBIC11017)
Photosystem i protein psaf (17 kDa, Protein from Acaryochloris marina MBIC110017)
Photosystem i complex from acaryochloris marina (Complex from Acaryochloris marina)
Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Acaryochloris marina MBIC11017)
Photosystem i protein psal (15 kDa, Protein from Acaryochloris marina MBIC 11017)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
Photosystem i iron-sulfur center (8 kDa, Protein from Acaryochloris marina MBIC110017)
Chlorophyll d (895 Da, Ligand)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Pheophytin a (871 Da, Ligand)
Chlorophyll d isomer (895 Da, Ligand)
Photosystem i reaction center subunit psak (9 kDa, Protein from Acaryochloris marina MBIC 11017)
Water (18 Da, Ligand)
Photosystem i reaction center subunit iv (9 kDa, Protein from Acaryochloris marina MBIC110017)
Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Acaryochloris marina MBIC110017)
Iron/sulfur cluster (351 Da, Ligand)
Unknown ligand (Ligand)
Photosystem i reaction center subunit ix (5 kDa, Protein from Acaryochloris marina MBIC110017)
Photosystem i protein psam (3 kDa, Protein from Acaryochloris marina MBIC11017)
Photosystem i protein psad (15 kDa, Protein from Acaryochloris marina MBIC110017)

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