EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"IRON/SULFUR CLUSTER" AND xref_links:"cpx" AND author_orcid:"0000-0001-9906-0334"

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EMD-11602

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Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Release date: Oct. 14, 2020
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7a09
Q-score: 0.399

Kratzat H, Mackens-Kiani T, Ameismeier M, Potocnjak M, Cheng J, Dacheux E, Namane A, Berninghausen O, Herzog F, Fromont-Racine M, Becker T, Beckmann R

EMBO J (2021) 40 pp. e105179-e105179 [ Pubmed: 33289941 DOI: doi:10.15252/embj.2020105179 ]

Sample:

Abce1-bound 43s pre-initiation complex (Complex from Homo sapiens)
40s ribosomal protein s24 (15 kDa, Protein from Human)
Receptor of activated protein c kinase 1 (35 kDa, Protein from Human)
18s ribosomal rna (555 kDa, RNA from Human)
Atp-binding cassette sub-family e member 1 (67 kDa, Protein from Human)
Adenosine-5'-diphosphate (427 Da, Ligand)
Eukaryotic translation initiation factor 2 subunit 1 (36 kDa, Protein from Human)
40s ribosomal protein s12 (14 kDa, Protein from Human)
40s ribosomal protein s14 (16 kDa, Protein from Human)
Eukaryotic translation initiation factor 2 subunit 2 (38 kDa, Protein from Human)
Guanosine-5'-triphosphate (523 Da, Ligand)
40s ribosomal protein s21 (9 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit l (66 kDa, Protein from Human)
Ubiquitin-40s ribosomal protein s27a (18 kDa, Protein from Human)
Adenosine-5'-triphosphate (507 Da, Ligand)
40s ribosomal protein s25 (13 kDa, Protein from Human)
40s ribosomal protein s23 (15 kDa, Protein from Human)
40s ribosomal protein s9 (22 kDa, Protein from Human)
40s ribosomal protein s10 (18 kDa, Protein from Human)
40s ribosomal protein s29 (6 kDa, Protein from Human)
Magnesium ion (24 Da, Ligand)
40s ribosomal protein s8 (24 kDa, Protein from Human)
Rna recognition motif (5 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit i (36 kDa, Protein from Human)
40s ribosomal protein s6 (28 kDa, Protein from Human)
40s ribosomal protein s3 (26 kDa, Protein from Human)
40s ribosomal protein s19 (16 kDa, Protein from Human)
40s ribosomal protein s5 (22 kDa, Protein from Human)
Eukaryotic translation initiation factor 1 (12 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit a (166 kDa, Protein from Human)
40s ribosomal protein s17 (15 kDa, Protein from Human)
40s ribosomal protein s27 (9 kDa, Protein from Human)
Trna (24 kDa, RNA from Human)
Methionine (149 Da, Ligand)
40s ribosomal protein s4, x isoform (29 kDa, Protein from Human)
Eukaryotic translation initiation factor 1a, x-chromosomal (12 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit m (42 kDa, Protein from Human)
40s ribosomal protein s11 (18 kDa, Protein from Human)
40s ribosomal protein s18 (17 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit k (25 kDa, Protein from Human)
40s ribosomal protein s26 (13 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit d (64 kDa, Protein from Human)
Zinc ion (65 Da, Ligand)
Eukaryotic translation initiation factor 3 subunit h (39 kDa, Protein from Human)
40s ribosomal protein s7 (22 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit f (37 kDa, Protein from Human)
60s ribosomal protein l41 (3 kDa, Protein from Human)
40s ribosomal protein s13 (17 kDa, Protein from Human)
40s ribosomal protein s28 (7 kDa, Protein from Human)
40s ribosomal protein s30 (6 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit c,eukaryotic translation initiation factor 3 subunit c,eukaryotic translation initiation factor 3 subunit c (106 kDa, Protein from Human)
40s ribosomal protein s2 (31 kDa, Protein from Human)
40s ribosomal protein s16 (16 kDa, Protein from Human)
40s ribosomal protein s3a (30 kDa, Protein from Human)
Iron/sulfur cluster (351 Da, Ligand)
40s ribosomal protein sa (32 kDa, Protein from Human)
40s ribosomal protein s15a (14 kDa, Protein from Human)
40s ribosomal protein s20 (13 kDa, Protein from Human)
40s ribosomal protein s15 (17 kDa, Protein from Human)
Eukaryotic translation initiation factor 2 subunit 3 (51 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit b (92 kDa, Protein from Human)
Eukaryotic translation initiation factor 3 subunit e (52 kDa, Protein from Human)

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EMD-11458

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Structure of a human ABCE1-bound 43S pre-initiation complex - State II

Release date: Oct. 7, 2020
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6zvj
Q-score: 0.365

Kratzat H, Mackens-Kiani T, Ameismeier M, Potocnjak M, Cheng J, Dacheux E, Namane A, Berninghausen O, Herzog F, Fromont-Racine M, Becker T, Beckmann R

EMBO J (2021) 40 pp. e105179-e105179 [ Pubmed: 33289941 DOI: doi:10.15252/embj.2020105179 ]

Sample:

40s ribosomal protein s16 (15 kDa, Protein from Homo sapiens)
40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit k (24 kDa, Protein from Homo sapiens)
40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
Receptor of activated protein c kinase 1 (34 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit b (65 kDa, Protein from Homo sapiens)
40s ribosomal protein s15 (14 kDa, Protein from Homo sapiens)
40s ribosomal protein s10 (11 kDa, Protein from Homo sapiens)
Adenosine-5'-diphosphate (427 Da, Ligand)
Eukaryotic translation initiation factor 3 subunit a (85 kDa, Protein from Homo sapiens)
40s ribosomal protein s24 (14 kDa, Protein from Homo sapiens)
40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
40s ribosomal protein s3 (24 kDa, Protein from Homo sapiens)
60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
Adenosine-5'-triphosphate (507 Da, Ligand)
40s ribosomal protein s4, x isoform (28 kDa, Protein from Homo sapiens)
Magnesium ion (24 Da, Ligand)
40s ribosomal protein s20 (11 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit e (50 kDa, Protein from Homo sapiens)
40s ribosomal protein s8 (23 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit i (35 kDa, Protein from Homo sapiens)
40s ribosomal protein s5 (21 kDa, Protein from Homo sapiens)
40s ribosomal protein s30 (5 kDa, Protein from Homo sapiens)
40s ribosomal protein s18 (16 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit f (29 kDa, Protein from Homo sapiens)
Rna recognition motif (unknown) (5 kDa, Protein from Homo sapiens)
40s ribosomal protein s12 (12 kDa, Protein from Homo sapiens)
40s ribosomal protein s14 (13 kDa, Protein from Homo sapiens)
40s ribosomal protein s28 (6 kDa, Protein from Homo sapiens)
Iron/sulfur cluster (351 Da, Ligand)
Atp-binding cassette sub-family e member 1 (66 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit c (86 kDa, Protein from Homo sapiens)
40s ribosomal protein s25 (7 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit l (44 kDa, Protein from Homo sapiens)
40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit h (36 kDa, Protein from Homo sapiens)
40s ribosomal protein s9 (21 kDa, Protein from Homo sapiens)
40s ribosomal protein s21 (8 kDa, Protein from Homo sapiens)
40s ribosomal protein s19 (15 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit m (41 kDa, Protein from Homo sapiens)
Zinc ion (65 Da, Ligand)
40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit d (61 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit j (29 kDa, Protein from Homo sapiens)
40s ribosomal protein s6 (25 kDa, Protein from Homo sapiens)
Abce1-bound 43s initiation complex (Complex from Homo sapiens)
40s ribosomal protein sa (24 kDa, Protein from Homo sapiens)
Ubiquitin-40s ribosomal protein s27a (7 kDa, Protein from Homo sapiens)
40s ribosomal protein s7 (20 kDa, Protein from Homo sapiens)
40s ribosomal protein s26 (11 kDa, Protein from Homo sapiens)
40s ribosomal protein s2 (23 kDa, Protein from Homo sapiens)
18s ribosomal rna (555 kDa, RNA from Homo sapiens)
40s ribosomal protein s3a (24 kDa, Protein from Homo sapiens)
40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 1 (10 kDa, Protein from Homo sapiens)
40s ribosomal protein s11 (16 kDa, Protein from Homo sapiens)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: