Cryo-EM structure of the marine siphophage vB_Dshs-R4C capsid
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 8gta
Q-score: 0.475
Cryo-EM structure of pseudorabies virus C-capsid
Resolution: 4.43 Å
EM Method: Single-particle
Fitted PDBs: 7fj1
Q-score: 0.142
Wang G, Zha Z, Huang P, Sun H, Huang Y, He M, Chen T, Lin L, Chen Z, Kong Z, Que Y, Li T, Gu Y, Yu H, Zhang J, Zheng Q, Chen Y, Li S, Xia N
Nat Commun (2022) 13 pp. 1533-1533 [ Pubmed: 35318331 DOI: doi:10.1038/s41467-022-29250-3 ]
- Capsid vertex component 1 (64 kDa, Protein from Suid alphaherpesvirus 1)
- Triplex capsid protein 1 (40 kDa, Protein from Suid alphaherpesvirus 1)
- Vp1/2 (7 kDa, Protein from Suid alphaherpesvirus 1)
- Suid alphaherpesvirus 1 (Virus from Suid alphaherpesvirus 1)
- Small capsomere-interacting protein (11 kDa, Protein from Suid alphaherpesvirus 1)
- Major capsid protein (146 kDa, Protein from Suid alphaherpesvirus 1)
- Triplex capsid protein 2 (31 kDa, Protein from Suid alphaherpesvirus 1)
- Dna packaging tegument protein ul25 (57 kDa, Protein from Suid alphaherpesvirus 1)
Cryo-EM structure of PRV A-capid
Resolution: 4.53 Å
EM Method: Single-particle
Fitted PDBs: 7fj3
Q-score: 0.023
Wang G, Zha Z, Huang P, Sun H, Huang Y, He M, Chen T, Lin L, Chen Z, Kong Z, Que Y, Li T, Gu Y, Yu H, Zhang J, Zheng Q, Chen Y, Li S, Xia N
Nat Commun (2022) 13 pp. 1533-1533 [ Pubmed: 35318331 DOI: doi:10.1038/s41467-022-29250-3 ]
- Triplex capsid protein 1 (40 kDa, Protein from Suid alphaherpesvirus 1)
- Suid alphaherpesvirus 1 (Virus from Suid alphaherpesvirus 1)
- Small capsomere-interacting protein (11 kDa, Protein from Suid alphaherpesvirus 1)
- Major capsid protein (146 kDa, Protein from Suid alphaherpesvirus 1)
- Triplex capsid protein 2 (31 kDa, Protein from Suid alphaherpesvirus 1)
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 7dnh
Q-score: 0.403
He M, Chi X, Zha Z, Li Y, Chen J, Huang Y, Huang S, Yu M, Wang Z, Song S, Liu X, Wei S, Li Z, Li T, Wang Y, Yu H, Zhao Q, Zhang J, Zheng Q, Gu Y, Li S, Xia N
J Virol (2021) 95 [ Pubmed: 33472937 DOI: doi:10.1128/JVI.01587-20 ]
- The light chain of 2h3 fab fragment (23 kDa, Protein from Mus musculus)
- Human papillomavirus type 58 (Complex from Mus musculus)
- Human papillomavirus type 58 in complexed with the fab fragment of 2h3 (Complex from Human papillomavirus type 58)
- Major capsid protein l1 (59 kDa, Protein from Human papillomavirus type 58)
- The heavy chain of 2h3 fab fragment (23 kDa, Protein from Mus musculus)
- Mus musculus (Complex)
Resolution: 6.41 Å
EM Method: Single-particle
Fitted PDBs: 7dnk
Q-score: 0.184
He M, Chi X, Zha Z, Li Y, Chen J, Huang Y, Huang S, Yu M, Wang Z, Song S, Liu X, Wei S, Li Z, Li T, Wang Y, Yu H, Zhao Q, Zhang J, Zheng Q, Gu Y, Li S, Xia N
J Virol (2021) 95 [ DOI: doi:10.1128/JVI.01587-20 Pubmed: 33472937 ]
- The light chain of 5g9 fab fragment (23 kDa, Protein from Mus musculus)
- Human papillomavirus type 58 pseudpvirus (Complex)
- 2-fold sub-articles refinement of human papillomavirus type 58 pseudpvirus in complexed with the fab fragment of 5g9 (Complex from Mus musculus)
- The heavy chain of 5g9 fab fragment (22 kDa, Protein from Mus musculus)
- Major capsid protein l1 (59 kDa, Protein from Human papillomavirus type 58)
- Fab fragment of 5g9 (Complex from Human papillomavirus type 58)
Resolution: 4.19 Å
EM Method: Single-particle
Fitted PDBs: 7dnl
Q-score: 0.339
He M, Chi X, Zha Z, Li Y, Chen J, Huang Y, Huang S, Yu M, Wang Z, Song S, Liu X, Wei S, Li Z, Li T, Wang Y, Yu H, Zhao Q, Zhang J, Zheng Q, Gu Y, Li S, Xia N
J Virol (2021) 95 [ Pubmed: 33472937 DOI: doi:10.1128/JVI.01587-20 ]
- Major capsid protein l1 (59 kDa, Protein from Human papillomavirus type 58)
- Human papillomavirus type 58 (Complex)
- The heavy chain of 2h3 fab fragment (23 kDa, Protein from Mus musculus)
- Fab fragment of a4b4 (Complex from Human papillomavirus type 58)
- Human papillomavirus type 58 in complexed with the fab fragment of a4b4 (Complex from Mus musculus)
- The light chain of a4b4 fab fragment (24 kDa, Protein from Mus musculus)