Prohead portal vertex of bacteriophage lambda
Resolution: 5.58 Å
EM Method: Single-particle
Fitted PDBs: 8xou
Q-score: 0.152
J Virol (2024) 98 pp. e0006824-e0006824 [ DOI: doi:10.1128/jvi.00068-24 Pubmed: 38661364 ]
- Major capsid protein (38 kDa, Protein from Escherichia phage Lambda)
- Escherichia phage lambda (Virus from Escherichia phage Lambda)
- Portal protein b (59 kDa, Protein from Escherichia phage Lambda)
Mature virion portal vertex of bacteriophage lambda
Resolution: 4.07 Å
EM Method: Single-particle
Fitted PDBs: 8xqb
Q-score: 0.334
J Virol (2024) 98 pp. e0006824-e0006824 [ DOI: doi:10.1128/jvi.00068-24 Pubmed: 38661364 ]
- Head-tail connector protein fii (12 kDa, Protein from Escherichia phage Lambda)
- Head completion protein (7 kDa, Protein from Escherichia phage Lambda)
- Escherichia phage lambda (Virus from Escherichia phage Lambda)
- Tail tube terminator protein (14 kDa, Protein from Escherichia phage Lambda)
- Major capsid protein (38 kDa, Protein from Escherichia phage Lambda)
- Portal protein b (59 kDa, Protein from Escherichia phage Lambda)
- Capsid decoration protein (11 kDa, Protein from Escherichia phage Lambda)
Cryo-EM structure of bacteriophage lambda procapsid at 5.03 Angstrom
Resolution: 5.03 Å
EM Method: Single-particle
Fitted PDBs: 7vi9
Q-score: 0.268
Structure (2022) 30 pp. 637- [ DOI: doi:10.1016/j.str.2021.12.009 Pubmed: 35026161 ]
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
Focused refinement of asymmetric unit of bacteriophage lambda procapsid at 3.88 Angstrom
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7via
Q-score: 0.444
Structure (2022) 30 pp. 637- [ Pubmed: 35026161 DOI: doi:10.1016/j.str.2021.12.009 ]
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
cryoEM structure of bacteriophage lambda capsid at 5.6 Angstrom
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 7vii
Q-score: 0.209
Structure (2022) 30 pp. 637- [ DOI: doi:10.1016/j.str.2021.12.009 Pubmed: 35026161 ]
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
- Capsid decoration protein (11 kDa, Protein from Escherichia phage lambda)
Asymmetric unit of cryoEM structure of bacteriophage lambda capsid at 3.76 Angstrom
Resolution: 3.76 Å
EM Method: Single-particle
Fitted PDBs: 7vik
Q-score: 0.447
Structure (2022) 30 pp. 637- [ Pubmed: 35026161 DOI: doi:10.1016/j.str.2021.12.009 ]
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
- Capsid decoration protein (11 kDa, Protein from Escherichia phage lambda)
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
Structure of HSV2 viron capsid portal vertex
Resolution: 5.39 Å
EM Method: Single-particle
Fitted PDBs: 6m6g
Q-score: 0.188
Wang N, Chen W, Zhu L, Zhu D, Feng R, Wang J, Zhu B, Zhang X, Chen X, Liu X, Yan R, Ni D, Zhou GG, Liu H, Rao Z, Wang X
Protein Cell (2020) 11 pp. 366-373 [ Pubmed: 32285350 DOI: doi:10.1007/s13238-020-00711-z ]
- Large tegument protein deneddylase (330 kDa, Protein from HHV-2)
- Coiled coils (7 kDa, Protein from HHV-2)
- Capsid vertex component 2 (63 kDa, Protein from HHV-2)
- Capsid vertex component 1 (74 kDa, Protein from HHV-2)
- Triplex capsid protein 2 (34 kDa, Protein from HHV-2)
- Human herpesvirus 2 (Virus from Human herpesvirus 2)
- Coiled coils (7 kDa, Protein from HHV-2)
- Triplex capsid protein 1 (50 kDa, Protein from HHV-2)
- Major capsid protein (149 kDa, Protein from HHV-2)
- Small capsomere-interacting protein (12 kDa, Protein from HHV-2)
Structure of HSV2 C-capsid portal vertex
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6m6h
Q-score: 0.202
Wang N, Chen W, Zhu L, Zhu D, Feng R, Wang J, Zhu B, Zhang X, Chen X, Liu X, Yan R, Ni D, Zhou GG, Liu H, Rao Z, Wang X
Protein Cell (2020) 11 pp. 366-373 [ Pubmed: 32285350 DOI: doi:10.1007/s13238-020-00711-z ]
- Large tegument protein deneddylase (330 kDa, Protein from HHV-2)
- Small capsomere-interacting protein (12 kDa, Protein from HHV-2)
- Human alphaherpesvirus 2 (Virus from Human alphaherpesvirus 2)
- Triplex capsid protein 2 (34 kDa, Protein from HHV-2)
- Triplex capsid protein 1 (50 kDa, Protein from HHV-2)
- Capsid vertex component 2 (63 kDa, Protein from HHV-2)
- Capsid vertex component 1 (74 kDa, Protein from HHV-2)
- Major capsid protein (149 kDa, Protein from HHV-2)
Structure of HSV2 B-capsid portal vertex
Resolution: 4.05 Å
EM Method: Single-particle
Fitted PDBs: 6m6i
Q-score: 0.257
Wang N, Chen W, Zhu L, Zhu D, Feng R, Wang J, Zhu B, Zhang X, Chen X, Liu X, Yan R, Ni D, Zhou GG, Liu H, Rao Z, Wang X
Protein Cell (2020) 11 pp. 366-373 [ DOI: doi:10.1007/s13238-020-00711-z Pubmed: 32285350 ]
- Major capsid protein (149 kDa, Protein from HHV-2)
- Human alphaherpesvirus 2 (Virus from Human alphaherpesvirus 2)
- Triplex capsid protein 1 (50 kDa, Protein from HHV-2)
- Coiled coils chain 2 (7 kDa, Protein from HHV-2)
- Small capsomere-interacting protein (12 kDa, Protein from HHV-2)
- Coiled coils chain 1 (6 kDa, Protein from HHV-2)
- Triplex capsid protein 2 (34 kDa, Protein from HHV-2)
