Human cytomegalovirus portal vertex, virion configuration 1 (VC1)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8tep
Q-score: 0.374
Sci Adv (2024) 10 pp. eadj1640-eadj1640 [ DOI: doi:10.1126/sciadv.adj1640 Pubmed: 38394211 ]
- Human herpesvirus 5 strain ad169 (Virus from Human herpesvirus 5 strain AD169)
- Large tegument protein deneddylase (253 kDa, Protein from Human herpesvirus 5 strain AD169)
- Inner tegument protein (110 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 1 (33 kDa, Protein from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (8 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 2 (71 kDa, Protein from Human herpesvirus 5 strain AD169)
- Large structural phosphoprotein (112 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 1 (68 kDa, Protein from Human herpesvirus 5 strain AD169)
- Major capsid protein (154 kDa, Protein from Human herpesvirus 5 strain AD169)
Human cytomegalovirus portal vertex, virion configuration 2 (VC2)
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 8tes
Q-score: 0.567
Sci Adv (2024) 10 pp. eadj1640-eadj1640 [ Pubmed: 38394211 DOI: doi:10.1126/sciadv.adj1640 ]
- Triplex capsid protein 1 (33 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 5 strain AD169)
- Large tegument protein deneddylase (253 kDa, Protein from Human herpesvirus 5 strain AD169)
- Large structural phosphoprotein (112 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 2 (71 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 1 (68 kDa, Protein from Human herpesvirus 5 strain AD169)
- Human herpesvirus 5 strain ad169 (Virus from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (8 kDa, Protein from Human herpesvirus 5 strain AD169)
- Major capsid protein (154 kDa, Protein from Human herpesvirus 5 strain AD169)
Human cytomegalovirus portal vertex, non-infectious enveloped particle (NIEP) configuration 1 (NC1)
Resolution: 4.26 Å
EM Method: Single-particle
Fitted PDBs: 8tet
Q-score: 0.461
Sci Adv (2024) 10 pp. eadj1640-eadj1640 [ Pubmed: 38394211 DOI: doi:10.1126/sciadv.adj1640 ]
- Triplex capsid protein 1 (33 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 5 strain AD169)
- Large tegument protein deneddylase (253 kDa, Protein from Human herpesvirus 5 strain AD169)
- Large structural phosphoprotein (112 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 2 (71 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 1 (68 kDa, Protein from Human herpesvirus 5 strain AD169)
- Human herpesvirus 5 strain ad169 (Virus from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (8 kDa, Protein from Human herpesvirus 5 strain AD169)
- Major capsid protein (154 kDa, Protein from Human herpesvirus 5 strain AD169)
Resolution: 4.01 Å
EM Method: Single-particle
Fitted PDBs: 8teu
Q-score: 0.43
Sci Adv (2024) 10 pp. eadj1640-eadj1640 [ DOI: doi:10.1126/sciadv.adj1640 Pubmed: 38394211 ]
- Human herpesvirus 5 strain ad169 (Virus from Human herpesvirus 5 strain AD169)
- Large tegument protein deneddylase (253 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 1 (33 kDa, Protein from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (8 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 2 (71 kDa, Protein from Human herpesvirus 5 strain AD169)
- Large structural phosphoprotein (112 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 1 (68 kDa, Protein from Human herpesvirus 5 strain AD169)
- Major capsid protein (154 kDa, Protein from Human herpesvirus 5 strain AD169)
Human cytomegalovirus penton vertex, CVSC-bound configuration
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 8tew
Q-score: 0.544
Sci Adv (2024) 10 pp. eadj1640-eadj1640 [ DOI: doi:10.1126/sciadv.adj1640 Pubmed: 38394211 ]
- Human herpesvirus 5 strain ad169 (Virus from Human herpesvirus 5 strain AD169)
- Large tegument protein deneddylase (253 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 1 (33 kDa, Protein from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (8 kDa, Protein from Human herpesvirus 5 strain AD169)
- Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 2 (71 kDa, Protein from Human herpesvirus 5 strain AD169)
- Large structural phosphoprotein (112 kDa, Protein from Human herpesvirus 5 strain AD169)
- Capsid vertex component 1 (68 kDa, Protein from Human herpesvirus 5 strain AD169)
- Major capsid protein (154 kDa, Protein from Human herpesvirus 5 strain AD169)
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 6w19
Q-score: 0.059
Liu W, Cui Y, Wang C, Li Z, Gong D, Dai X, Bi GQ, Sun R, Zhou ZH
Nat Microbiol (2020) 5 pp. 1285-1298 [ DOI: doi:10.1038/s41564-020-0758-1 Pubmed: 32719506 ]
- Human herpesvirus 4 strain b95-8 (Virus from Human herpesvirus 4 strain B95-8)
- Triplex capsid protein 1 (39 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Small capsomere-interacting protein (18 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Triplex capsid protein 2 (33 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Major capsid protein (154 kDa, Protein from Epstein-Barr virus (strain B95-8))
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6w2d
Q-score: 0.28
Liu W, Cui Y, Wang C, Li Z, Gong D, Dai X, Bi GQ, Sun R, Zhou ZH
Nat Microbiol (2020) 5 pp. 1285-1298 [ DOI: doi:10.1038/s41564-020-0758-1 Pubmed: 32719506 ]
- Major capsid protein (154 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Triplex capsid protein 1 (39 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Capsid vertex component 1 (54 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Large tegument protein deneddylase (338 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Human herpesvirus 4 strain b95-8 (Virus from Human herpesvirus 4 strain B95-8)
- Small capsomere-interacting protein (18 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Capsid vertex component 2 (62 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Triplex capsid protein 2 (33 kDa, Protein from Epstein-Barr virus (strain B95-8))
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6w2e
Q-score: 0.245
Liu W, Cui Y, Wang C, Li Z, Gong D, Dai X, Bi GQ, Sun R, Zhou ZH
Nat Microbiol (2020) 5 pp. 1285-1298 [ DOI: doi:10.1038/s41564-020-0758-1 Pubmed: 32719506 ]
- Major capsid protein (154 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Triplex capsid protein 1 (39 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Capsid vertex component 1 (54 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Large tegument protein deneddylase (338 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Human herpesvirus 4 strain b95-8 (Virus from Human herpesvirus 4 strain B95-8)
- Small capsomere-interacting protein (18 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Capsid vertex component 2 (62 kDa, Protein from Epstein-Barr virus (strain B95-8))
- Triplex capsid protein 2 (33 kDa, Protein from Epstein-Barr virus (strain B95-8))
Atomic structure of the Human Herpesvirus 6B Capsid and Capsid-Associated Tegument Complexes
Resolution: 9.0 Å
EM Method: Single-particle
Fitted PDBs: 6q1f
Q-score: 0.213
Zhang Y, Liu W, Li Z, Kumar V, Alvarez-Cabrera AL, Leibovitch EC, Cui Y, Mei Y, Bi GQ, Jacobson S, Zhou ZH
Nat Commun (2019) 10 pp. 5346-5346 [ DOI: doi:10.1038/s41467-019-13064-x Pubmed: 31767868 ]
- Human herpesvirus 6 strain z29 (Virus from Human herpesvirus 6 strain Z29)
- Triplex capsid protein 1 (34 kDa, Protein from Human herpesvirus 6B (strain Z29))
- Triplex capsid protein 2 (33 kDa, Protein from Human herpesvirus 6B (strain Z29))
- Large structural phosphoprotein (95 kDa, Protein from Human herpesvirus 6B (strain Z29))
- Small capsomere-interacting protein (9 kDa, Protein from Human herpesvirus 6B (strain Z29))
- Major capsid protein (152 kDa, Protein from Human herpesvirus 6B (strain Z29))