Cryo-EM structure of the fd bacteriophage capsid major coat protein pVIII
Resolution: 3.2 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ch5
Q-score: 0.482
Bohning J, Graham M, Letham SC, Davis LK, Schulze U, Stansfeld PJ, Corey RA, Pearce P, Tarafder AK, Bharat TAM
Nat Commun (2023) 14 pp. 8429-8429 [ DOI: doi:10.1038/s41467-023-44160-8 Pubmed: 38114502 ]
- Major capsid protein pviii (5 kDa, Protein from Escherichia coli)
- Enterobacteria phage fd (Virus from Enterobacteria phage fd)
Capsid of genome release intermediate of bacteriophage SU10
Siborova M, Fuzik T, Prochazkova M, Novacek J, Benesik M, Nilsson AS, Plevka P
Nat Commun (2022) 13 pp. 5622-5622 [ Pubmed: 36153309 DOI: doi:10.1038/s41467-022-33305-w ]
- Major capsid protein (Protein from Escherichia coli)
- Escherichia phage vb_ecop_su10 (27 MDa, Virus from Escherichia phage vB EcoP SU10)
Satellite phage P4 procapsid including size determination (Sid) protein
Resolution: 4.19 Å
EM Method: Single-particle
Fitted PDBs: 7jw1
Q-score: 0.445
Kizziah JL, Rodenburg CM, Dokland T
Viruses (2020) 12 [ DOI: doi:10.3390/v12090953 Pubmed: 32867300 ]
- Size determination protein sid (27 kDa, Protein from Enterobacteria phage P4)
- Major capsid protein gpn (40 kDa, Protein from Escherichia phage P2)
- P4 procapsid (Complex from Escherichia coli)
Icosahedral reconstruction of bacteriophage P4 procapsid
Dearborn AD, Laurinmaki P, Chandramouli P, Rodenburg CM, Wang S, Butcher SJ, Dokland T
J Struct Biol (2012) 178 pp. 215-224 [ DOI: doi:10.1016/j.jsb.2012.04.002 Pubmed: 22508104 ]
- Gpn (9 MDa, Protein from Escherichia coli)
- Satellite bacteriophage p4 procapsid (11 MDa, Sample)
- Sid (1 MDa, Protein from Escherichia coli)
Icosahedral reconstruction of bacteriophage P2 procapsid
Dearborn AD, Laurinmaki P, Chandramouli P, Rodenburg CM, Wang S, Butcher SJ, Dokland T
J Struct Biol (2012) 178 pp. 215-224 [ DOI: doi:10.1016/j.jsb.2012.04.002 Pubmed: 22508104 ]
- Gpn (16 MDa, Protein from Escherichia coli)
- Bacteriophage p2 procapsid (16 MDa, Sample)
Structure of a chaperonin complex with non-native substrate protein gp23
Clare DK, Bakkes PJ, van Heerikhuizen H, van der Vies SM, Saibil HR
Nature (2009) 457 pp. 107-110 [ DOI: doi:10.1038/nature07479 Pubmed: 19122642 ]
- Groel-gp23 (850 kDa, Sample)
- Gp23 (56 kDa, Protein from Enterobacteria phage T4)
- Groel (56 kDa, Protein from Escherichia coli)
Structure of a chaperonin complex with non-native substrate protein gp23
Clare DK, Bakkes PJ, van Heerikhuizen H, van der Vies SM, Saibil HR
Nature (2009) 457 pp. 107-110 [ DOI: doi:10.1038/nature07479 Pubmed: 19122642 ]
- Gp23 (56 kDa, Protein from Enterobacteria phage T4)
- Groel (56 kDa, Protein from Escherichia coli)
- Groel-gp23(2) (900 kDa, Sample)
Clare DK, Bakkes PJ, van Heerikhuizen H, van der Vies SM, Saibil HR
Nature (2009) 457 pp. 107-110 [ DOI: doi:10.1038/nature07479 Pubmed: 19122642 ]
- Groel-gp31-gp23(1)-adpalf3 (950 kDa, Sample)
- Groel (56 kDa, Protein from Escherichia coli)
- Adpalf3 (Ligand from synthetic construct)
- Gp23 (56 kDa, Protein from Enterobacteria phage T4)
- Gp31 (12 kDa, Protein from Enterobacteria phage T4)
Clare DK, Bakkes PJ, van Heerikhuizen H, van der Vies SM, Saibil HR
Nature (2009) 457 pp. 107-110 [ DOI: doi:10.1038/nature07479 Pubmed: 19122642 ]
- Groel (56 kDa, Protein from Escherichia coli)
- Adpalf3 (Ligand from synthetic construct)
- Gp23 (56 kDa, Protein from Enterobacteria phage T4)
- Gp31 (12 kDa, Protein from Enterobacteria phage T4)
- Groel-gp31-gp23(2)-adpalf3 (1 MDa, Sample)