EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"POTASSIUM ION" AND author_name:"Fernandez-marino AI" AND resolution:[3 TO 4}

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EMD-40350

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CryoEM structure of rat Kv2.1(1-598) L403A mutant in nanodiscs

Release date: Sept. 27, 2023
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 8sda
Q-score: 0.478

Fernandez-Marino AI, Tan XF, Bae C, Huffer K, Jiang J, Swartz KJ

Nature (2023) 622 pp. 410-417 [ DOI: doi:10.1038/s41586-023-06582-8 Pubmed: 37758949 ]

Sample:

(2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
Potassium voltage-gated channel subfamily b member 1 (68 kDa, Protein from Rattus norvegicus)
Potassium ion (39 Da, Ligand)
Voltage-dependent potassium channel kv2.1 l403a mutant (Complex from Rattus norvegicus)

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EMD-25414

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Structure of human Kv1.3 with Fab-ShK fusion

Release date: June 29, 2022
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 7ssv
Q-score: 0.441

Selvakumar P, Fernandez-Marino AI, Khanra N, He C, Paquette AJ, Wang B, Huang R, Smider VV, Rice WJ, Swartz KJ, Meyerson JR

Nat Commun (2022) 13 pp. 3854-3854 [ DOI: doi:10.1038/s41467-022-31285-5 Pubmed: 35788586 ]

Sample:

Potassium ion (39 Da, Ligand)
Potassium voltage-gated channel subfamily a member 3,green fluorescent protein fusion (95 kDa, Protein from Aequorea victoria)
Kv1.3 with fab-shk (Complex from Homo sapiens)
Fab-shk fusion, light chain (22 kDa, Protein from unidentified)
Fab-shk fusion, heavy chain (29 kDa, Protein from unidentified)

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EMD-25417

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Structure of human Kv1.3 with A0194009G09 nanobodies

Release date: June 29, 2022
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 7ssz
Q-score: 0.481

Selvakumar P, Fernandez-Marino AI, Khanra N, He C, Paquette AJ, Wang B, Huang R, Smider VV, Rice WJ, Swartz KJ, Meyerson JR

Nat Commun (2022) 13 pp. 3854-3854 [ DOI: doi:10.1038/s41467-022-31285-5 Pubmed: 35788586 ]

Sample:

Kv1.3 with nanobody a0194009g09 (Complex from Homo sapiens)
Nanobody a0194009g09 (13 kDa, Protein from synthetic construct)
Potassium voltage-gated channel subfamily a member 3,green fluorescent protein fusion (95 kDa, Protein from Aequorea victoria)
Potassium ion (39 Da, Ligand)

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EMD-25147

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Structure of shaker-IR

Release date: March 30, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7sip
Q-score: 0.529

Tan XF, Bae C, Stix R, Fernandez-Marino AI, Huffer K, Chang TH, Jiang J, Faraldo-Gomez JD, Swartz KJ

Sci Adv (2022) 8 pp. eabm7814-eabm7814 [ DOI: doi:10.1126/sciadv.abm7814 Pubmed: 35302848 ]

Sample:

Potassium channel (Cell from Drosophila melanogaster)
Water (18 Da, Ligand)
Potassium ion (39 Da, Ligand)
(2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
Potassium voltage-gated channel protein shaker (69 kDa, Protein from Drosophila melanogaster)

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Sort by: Download

Showing 1 - 4 of 4. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [4]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

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