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was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

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Tissue biology and disease modelling

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sample_name:"Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial"

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EMD-16966

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Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.

Release date: Jan. 10, 2024
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8om2
Q-score: 0.602

Ast T, Itoh Y, Sadre S, McCoy JG, Namkoong G, Wengrod JC, Chicherin I, Joshi PR, Kamenski P, Suess DLM, Amunts A, Mootha VK

Mol Cell (2024) 84 pp. 359- [ DOI: doi:10.1016/j.molcel.2023.12.016 Pubmed: 38199006 ]

Sample:

Probable s-adenosyl-l-methionine-dependent rna methyltransferase rsm22, mitochondrial (72 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp21, mitochondrial (20 kDa, Protein from Saccharomyces cerevisiae)
Potassium ion (39 Da, Ligand)
Water (18 Da, Ligand)
Small subunit of mitochondrial ribosome in complex with mettl17/rsm22 (Complex from Saccharomyces cerevisiae)
37s ribosomal protein s18, mitochondrial (24 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s9, mitochondrial (31 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s26, mitochondrial (30 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s5, mitochondrial (34 kDa, Protein from Saccharomyces cerevisiae)
Ribosomal protein var1, mitochondrial (47 kDa, Protein from Saccharomyces cerevisiae)
3-hydroxyisobutyryl-coa hydrolase, mitochondrial (56 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein nam9, mitochondrial (56 kDa, Protein from Saccharomyces cerevisiae)
Mitochondrial 37s ribosomal protein s27 (12 kDa, Protein from Saccharomyces cerevisiae)
15s mitochondrial rrna (528 kDa, RNA from Saccharomyces cerevisiae)
37s ribosomal protein sws2, mitochondrial (16 kDa, Protein from Saccharomyces cerevisiae)
Iron/sulfur cluster (351 Da, Ligand)
37s ribosomal protein s17, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s7, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
Mitochondrial mrna-processing protein cox24 (12 kDa, Protein from Saccharomyces cerevisiae)
Adenosine-5'-triphosphate (507 Da, Ligand)
37s ribosomal protein s24, mitochondrial (37 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s12, mitochondrial (16 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s19, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s10, mitochondrial (23 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp10, mitochondrial (10 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp51, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s16, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
Protein fyv4, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
Magnesium ion (24 Da, Ligand)
37s ribosomal protein s35, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp17, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s25, mitochondrial (30 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp4, mitochondrial (44 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s23, mitochondrial (50 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein rsm18, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp1, mitochondrial (36 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp13, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
Dodecyl-beta-d-maltoside (510 Da, Ligand)
37s ribosomal protein mrp2, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s28, mitochondrial (33 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s8, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein pet123, mitochondrial (36 kDa, Protein from Saccharomyces cerevisiae)

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EMD-27249

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Yeast mitochondrial small subunit assembly intermediate (State 1)

Release date: Dec. 21, 2022
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8d8j
Q-score: 0.425

Harper NJ, Burnside C, Klinge S

Nature (2023) 614 pp. 175-181 [ DOI: doi:10.1038/s41586-022-05621-0 Pubmed: 36482135 ]

Sample:

37s ribosomal protein nam9, mitochondrial (56 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp17, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s17, mitochondrial (27 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s5, mitochondrial (34 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s28, mitochondrial (33 kDa, Protein from Saccharomyces cerevisiae)
Probable s-adenosyl-l-methionine-dependent rna methyltransferase rsm22, mitochondrial (72 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s8, mitochondrial (17 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein rsm18, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
Magnesium ion (24 Da, Ligand)
37s ribosomal protein s16, mitochondrial (13 kDa, Protein from Saccharomyces cerevisiae)
Protein fyv4, mitochondrial (15 kDa, Protein from Saccharomyces cerevisiae)
Iron/sulfur cluster (351 Da, Ligand)
15s ribosomal rna (549 kDa, RNA from Saccharomyces cerevisiae)
Mitochondrial group i intron splicing factor ccm1 (101 kDa, Protein from Saccharomyces cerevisiae)
Yeast mitochondrial small subunit assembly intermediate (state 3) (1 MDa, Complex from Saccharomyces cerevisiae)
37s ribosomal protein pet123, mitochondrial (36 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein s35, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)
Us12m (16 kDa, Protein from Saccharomyces cerevisiae)
37s ribosomal protein mrp13, mitochondrial (39 kDa, Protein from Saccharomyces cerevisiae)

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EMD-27250

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Yeast mitochondrial small subunit assembly intermediate (State 2)

Release date: Dec. 21, 2022
Resolution: 3.13 Å
EM Method: Single-particle
Fitted PDBs: 8d8k
Q-score: 0.508

Harper NJ, Burnside C, Klinge S

Nature (2023) 614 pp. 175-181 [ DOI: doi:10.1038/s41586-022-05621-0 Pubmed: 36482135 ]

Sample:

37s ribosomal protein s7, mitochondrial (27 kDa, Protein from baker's yeast)
37s ribosomal protein s9, mitochondrial (31 kDa, Protein from baker's yeast)
37s ribosomal protein sws2, mitochondrial (16 kDa, Protein from baker's yeast)
37s ribosomal protein mrp13, mitochondrial (39 kDa, Protein from baker's yeast)
37s ribosomal protein rsm18, mitochondrial (15 kDa, Protein from baker's yeast)
37s ribosomal protein mrp10, mitochondrial (10 kDa, Protein from baker's yeast)
37s ribosomal protein s16, mitochondrial (13 kDa, Protein from baker's yeast)
37s ribosomal protein mrp4, mitochondrial (44 kDa, Protein from baker's yeast)
37s ribosomal protein mrp17, mitochondrial (15 kDa, Protein from baker's yeast)
37s ribosomal protein s26, mitochondrial (30 kDa, Protein from baker's yeast)
37s ribosomal protein mrp1, mitochondrial (36 kDa, Protein from baker's yeast)
37s ribosomal protein s19, mitochondrial (10 kDa, Protein from baker's yeast)
Mrps12 isoform 1 (16 kDa, Protein from baker's yeast)
37s ribosomal protein mrp2, mitochondrial (13 kDa, Protein from baker's yeast)
15s ribosomal rna (549 kDa, RNA from baker's yeast)
Mitochondrial 37s ribosomal protein s27 (12 kDa, Protein from baker's yeast)
37s ribosomal protein mrp51, mitochondrial (39 kDa, Protein from baker's yeast)
37s ribosomal protein s23, mitochondrial (50 kDa, Protein from baker's yeast)
Yeast mitochondrial small subunit assembly intermediate (state 2) (1 MDa, Complex from Saccharomyces cerevisiae)
37s ribosomal protein s28, mitochondrial (33 kDa, Protein from baker's yeast)
37s ribosomal protein s10, mitochondrial (23 kDa, Protein from baker's yeast)
37s ribosomal protein pet123, mitochondrial (36 kDa, Protein from baker's yeast)
Adenosine-5'-triphosphate (507 Da, Ligand)
Protein fyv4, mitochondrial (15 kDa, Protein from baker's yeast)
37s ribosomal protein s25, mitochondrial (30 kDa, Protein from baker's yeast)
Water (18 Da, Ligand)
37s ribosomal protein mrp21, mitochondrial (20 kDa, Protein from baker's yeast)
37s ribosomal protein s17, mitochondrial (27 kDa, Protein from baker's yeast)
Probable s-adenosyl-l-methionine-dependent rna methyltransferase rsm22, mitochondrial (72 kDa, Protein from baker's yeast)
Magnesium ion (24 Da, Ligand)
Iron/sulfur cluster (351 Da, Ligand)
37s ribosomal protein s18, mitochondrial (24 kDa, Protein from baker's yeast)
37s ribosomal protein s24, mitochondrial (37 kDa, Protein from baker's yeast)
37s ribosomal protein nam9, mitochondrial (56 kDa, Protein from baker's yeast)
37s ribosomal protein s5, mitochondrial (34 kDa, Protein from baker's yeast)
37s ribosomal protein s8, mitochondrial (17 kDa, Protein from baker's yeast)
Ribosomal protein var1, mitochondrial (47 kDa, Protein from baker's yeast)
Unknown protein sequence (8 kDa, Protein from baker's yeast)
37s ribosomal protein s35, mitochondrial (39 kDa, Protein from baker's yeast)
Mitochondrial group i intron splicing factor ccm1 (101 kDa, Protein from baker's yeast)

[Show more]

EMD-27251

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Yeast mitochondrial small subunit assembly intermediate (State 3)

Release date: Dec. 14, 2022
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8d8l
Q-score: 0.614

Harper NJ, Burnside C, Klinge S

Nature (2023) 614 pp. 175-181 [ DOI: doi:10.1038/s41586-022-05621-0 Pubmed: 36482135 ]

Sample:

37s ribosomal protein s7, mitochondrial (27 kDa, Protein from baker's yeast)
37s ribosomal protein s9, mitochondrial (31 kDa, Protein from baker's yeast)
3-hydroxyisobutyryl-coa hydrolase, mitochondrial (56 kDa, Protein from baker's yeast)
37s ribosomal protein sws2, mitochondrial (16 kDa, Protein from baker's yeast)
37s ribosomal protein mrp13, mitochondrial (39 kDa, Protein from baker's yeast)
37s ribosomal protein rsm18, mitochondrial (15 kDa, Protein from baker's yeast)
37s ribosomal protein mrp10, mitochondrial (10 kDa, Protein from baker's yeast)
37s ribosomal protein s16, mitochondrial (13 kDa, Protein from baker's yeast)
37s ribosomal protein mrp4, mitochondrial (44 kDa, Protein from baker's yeast)
37s ribosomal protein mrp17, mitochondrial (15 kDa, Protein from baker's yeast)
37s ribosomal protein s26, mitochondrial (30 kDa, Protein from baker's yeast)
37s ribosomal protein mrp1, mitochondrial (36 kDa, Protein from baker's yeast)
37s ribosomal protein s19, mitochondrial (10 kDa, Protein from baker's yeast)
37s ribosomal protein mrp2, mitochondrial (13 kDa, Protein from baker's yeast)
15s ribosomal rna (549 kDa, RNA from baker's yeast)
37s ribosomal protein mrp51, mitochondrial (39 kDa, Protein from baker's yeast)
Mitochondrial 37s ribosomal protein s27 (12 kDa, Protein from baker's yeast)
37s ribosomal protein s23, mitochondrial (50 kDa, Protein from baker's yeast)
37s ribosomal protein s28, mitochondrial (33 kDa, Protein from baker's yeast)
37s ribosomal protein s10, mitochondrial (23 kDa, Protein from baker's yeast)
37s ribosomal protein pet123, mitochondrial (36 kDa, Protein from baker's yeast)
Adenosine-5'-triphosphate (507 Da, Ligand)
Protein fyv4, mitochondrial (15 kDa, Protein from baker's yeast)
37s ribosomal protein s25, mitochondrial (30 kDa, Protein from baker's yeast)
Water (18 Da, Ligand)
37s ribosomal protein mrp21, mitochondrial (20 kDa, Protein from baker's yeast)
37s ribosomal protein s17, mitochondrial (27 kDa, Protein from baker's yeast)
Probable s-adenosyl-l-methionine-dependent rna methyltransferase rsm22, mitochondrial (72 kDa, Protein from baker's yeast)
Magnesium ion (24 Da, Ligand)
Iron/sulfur cluster (351 Da, Ligand)
37s ribosomal protein s18, mitochondrial (24 kDa, Protein from baker's yeast)
37s ribosomal protein s24, mitochondrial (37 kDa, Protein from baker's yeast)
37s ribosomal protein nam9, mitochondrial (56 kDa, Protein from baker's yeast)
37s ribosomal protein s12, mitochondrial (16 kDa, Protein from baker's yeast)
37s ribosomal protein s5, mitochondrial (34 kDa, Protein from baker's yeast)
37s ribosomal protein s8, mitochondrial (17 kDa, Protein from baker's yeast)
Ribosomal protein var1, mitochondrial (47 kDa, Protein from baker's yeast)
Yeast mitochondrial small subunit assembly intermediate (state 3) (1 MDa, Complex from Saccharomyces cerevisiae)
Unknown protein sequence (8 kDa, Protein from baker's yeast)
37s ribosomal protein s35, mitochondrial (39 kDa, Protein from baker's yeast)

[Show more]

Sort by: Download

Showing 1 - 4 of 4. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [4]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: