Edit your search query here and hit Return to execute it:
sample_name:"PsbM"
Cryo-EM structure of cryptophyte photosystem II
Li K, Zhao LS, Zhang YZ, Liu LN
To Be Published
Sample:
- Pheophytin a (871 Da, Ligand)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e})-3,7,12,16-tetramethyl-18-[(4~{r})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol (564 Da, Ligand)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Acpii-3 (24 kDa, Protein from Chroomonas placoidea)
- Psbm (3 kDa, Protein from Chroomonas placoidea)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Psb-gama_linker (31 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein j (3 kDa, Protein from Chroomonas placoidea)
- Chlorophyll c2 (608 Da, Ligand)
- Photosystem ii d2 protein (39 kDa, Protein from Chroomonas placoidea)
- Photosystem ii cytochrome c550 (17 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein k (5 kDa, Protein from Chroomonas placoidea)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein psb30 (3 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein i (4 kDa, Protein from Chroomonas placoidea)
- Acpii-1 (23 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein z (6 kDa, Protein from Chroomonas placoidea)
- Fe (ii) ion (55 Da, Ligand)
- Psbw (13 kDa, Protein from Chroomonas placoidea)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Photosystem ii of cryptophyte (1 MDa, Complex from Chroomonas placoidea)
- Acpii-2 (22 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein l (4 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein h (7 kDa, Protein from Chroomonas placoidea)
- Chloride ion (35 Da, Ligand)
- Psbo (32 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein x (4 kDa, Protein from Chroomonas placoidea)
- Acpii-4 (23 kDa, Protein from Chroomonas placoidea)
- Cytochrome b559 subunit beta (4 kDa, Protein from Chroomonas placoidea)
- Photosystem ii reaction center protein t (3 kDa, Protein from Chroomonas placoidea)
- Bicarbonate ion (61 Da, Ligand)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- Water (18 Da, Ligand)
- Psbc_cp43 (52 kDa, Protein from Chroomonas placoidea)
- Acpii-5 (23 kDa, Protein from Chroomonas placoidea)
- Acpii-6 (25 kDa, Protein from Chroomonas placoidea)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem ii protein d1 (39 kDa, Protein from Chroomonas placoidea)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol (550 Da, Ligand)
- (6'r,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene (536 Da, Ligand)
- Psbq (15 kDa, Protein from Chroomonas placoidea)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Chroomonas placoidea)
- Psbu (13 kDa, Protein from Chroomonas placoidea)
- Chlorophyll a (893 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
Release date: Dec. 20, 2023
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8j5k
Q-score: 0.504
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8j5k
Q-score: 0.504
Zhao S, Shen L, Li X, Tao Q, Li Z, Xu C, Zhou C, Yang Y, Sang M, Han G, Yu LJ, Kuang T, Shen JR, Wang W
Nat Commun (2023) 14 pp. 8164-8164 [ Pubmed: 38071196 DOI: doi:10.1038/s41467-023-44055-8 ]
Sample:
- Fe (ii) ion (55 Da, Ligand)
- Psbu (10 kDa, Protein from Stephanocyclus meneghinianus)
- Psbz (6 kDa, Protein from Stephanocyclus meneghinianus)
- Fcpii-i, fucoxanthin chlorophyll a/c binding protein (23 kDa, Protein from Stephanocyclus meneghinianus)
- Psbi (3 kDa, Protein from Stephanocyclus meneghinianus)
- Psbj (3 kDa, Protein from Stephanocyclus meneghinianus)
- Psbc (49 kDa, Protein from Stephanocyclus meneghinianus)
- Psbw (5 kDa, Protein from Stephanocyclus meneghinianus)
- Psby (3 kDa, Protein from Stephanocyclus meneghinianus)
- Cm-psii-fcpii (Complex from Stephanocyclus meneghinianus)
- Psbx (3 kDa, Protein from Stephanocyclus meneghinianus)
- Psbo (26 kDa, Protein from Stephanocyclus meneghinianus)
- Psbf (3 kDa, Protein from Stephanocyclus meneghinianus)
- Fcpii-g, fucoxanthin chlorophyll a/c binding protein (18 kDa, Protein from Stephanocyclus meneghinianus)
- Chlorophyll a (893 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Psbd (37 kDa, Protein from Stephanocyclus meneghinianus)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Beta-carotene (536 Da, Ligand)
- Pheophytin a (871 Da, Ligand)
- Fcpii-k, fucoxanthin chlorophyll a/c binding protein (13 kDa, Protein from Stephanocyclus meneghinianus)
- Psbh (7 kDa, Protein from Stephanocyclus meneghinianus)
- Psbv (14 kDa, Protein from Stephanocyclus meneghinianus)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- (3s,3'r,5r,6s,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol (582 Da, Ligand)
- Psba (36 kDa, Protein from Stephanocyclus meneghinianus)
- Psbb (53 kDa, Protein from Stephanocyclus meneghinianus)
- Psb34 (2 kDa, Protein from Stephanocyclus meneghinianus)
- Fcpii-h1, fucoxanthin chlorophyll a/c binding protein (18 kDa, Protein from Stephanocyclus meneghinianus)
- Fcpii-h2, fucoxanthin chlorophyll a/c binding protein (18 kDa, Protein from Stephanocyclus meneghinianus)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- (3s,3's,5r,5'r,6s,6'r,8'r)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate (658 Da, Ligand)
- Psbk (4 kDa, Protein from Stephanocyclus meneghinianus)
- Fcpii-j, fucoxanthin chlorophyll a/c binding protein (17 kDa, Protein from Stephanocyclus meneghinianus)
- Psbq' (16 kDa, Protein from Stephanocyclus meneghinianus)
- Chloride ion (35 Da, Ligand)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Psbe (8 kDa, Protein from Stephanocyclus meneghinianus)
- Bicarbonate ion (61 Da, Ligand)
- Psbm (4 kDa, Protein from Stephanocyclus meneghinianus)
- Psbt (3 kDa, Protein from Stephanocyclus meneghinianus)
- (1~{r})-3,5,5-trimethyl-4-[(1~{e},3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e})-3,7,12,16-tetramethyl-18-[(4~{r})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15-octaen-17-ynyl]cyclohex-3-en-1-ol (566 Da, Ligand)
- Psbl (4 kDa, Protein from Stephanocyclus meneghinianus)
In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
Release date: Feb. 8, 2023
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7y7a
Q-score: 0.198
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7y7a
Q-score: 0.198
You X, Zhang X, Cheng J, Xiao Y, Ma J, Sun S, Zhang X, Wang HW, Sui SF
Nature (2023) 616 pp. 199-206 [ DOI: doi:10.1038/s41586-023-05831-0 Pubmed: 36922595 ]
Sample:
- Fas1 domain-containing protein (31 kDa, Protein from Porphyridium purpureum)
- Fas1 domain-containing protein (26 kDa, Protein from Porphyridium purpureum)
- (1r,2s)-4-{(1e,3e,5e,7e,9e,11e,13e,15e,17e)-18-[(4s)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol (568 Da, Ligand)
- (2s)-2,3-dihydroxypropyl octadecanoate (358 Da, Ligand)
- Psbq' (22 kDa, Protein from Porphyridium purpureum)
- Lpp1 (10 kDa, Protein from Porphyridium purpureum)
- Phycocyanobilin (588 Da, Ligand)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Porphyridium purpureum)
- Psab (82 kDa, Protein from Porphyridium purpureum)
- Phycoerythrin alpha subunit (17 kDa, Protein from Porphyridium purpureum)
- Psbw (3 kDa, Protein from Porphyridium purpureum)
- Beta-d-glucopyranose (180 Da, Ligand)
- Psii_pbs31 domain-containing protein (22 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 31.8 kda linker polypeptide, phycoerythrin-associated, rod (27 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein t (3 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein 1b-21, chloroplastic (19 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit iii (17 kDa, Protein from Porphyridium purpureum)
- Water (18 Da, Ligand)
- Photosystem i reaction center subunit xi (14 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein of lhcii type iii, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- Fe (iii) ion (55 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Photosystem i subunit o (9 kDa, Protein from Porphyridium purpureum)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Phycobilisome 27.9 kda linker polypeptide, phycoerythrin-associated, rod (37 kDa, Protein from Porphyridium purpureum)
- C-phycocyanin alpha subunit (17 kDa, Protein from Porphyridium purpureum)
- Lrc5 (30 kDa, Protein from Porphyridium purpureum)
- Cytochrome c550 (17 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 31.8 kda linker polypeptide, phycoerythrin-associated, rod (55 kDa, Protein from Porphyridium purpureum)
- Linker4 (11 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein z (6 kDa, Protein from Porphyridium purpureum)
- Phylloquinone (450 Da, Ligand)
- Oxygen-evolving enhancer protein (30 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a (893 Da, Ligand)
- Phycoerythrobilin (588 Da, Ligand)
- Photosystem i reaction center subunit psak (6 kDa, Protein from Porphyridium purpureum)
- Psar (12 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center x protein (4 kDa, Protein from Porphyridium purpureum)
- R-phycoerythrin gamma chain, chloroplastic (36 kDa, Protein from Porphyridium purpureum)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Chlorophyll a-b binding protein 1b-21, chloroplastic (19 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Porphyridium purpureum)
- Ps ii complex 12 kda extrinsic protein (16 kDa, Protein from Porphyridium purpureum)
- Phycourobilin (590 Da, Ligand)
- Pheophytin a (871 Da, Ligand)
- Lrc4 (16 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein j (3 kDa, Protein from Porphyridium purpureum)
- Cnt (10 kDa, Protein from Porphyridium purpureum)
- Photosystem ii d2 protein (39 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 31.8 kda linker polypeptide, phycoerythrin-associated, rod (39 kDa, Protein from Porphyridium purpureum)
- Cytochrome c6 (8 kDa, Protein from Porphyridium purpureum)
- Lpp2 (17 kDa, Protein from Porphyridium purpureum)
- Carsp1 (24 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (10 kDa, Protein from Porphyridium purpureum)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Porphyridium purpureum)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Photosystem ii reaction center protein i (4 kDa, Protein from Porphyridium purpureum)
- In situ double-pbs-psii-psi-lhcs megacomplex from porphyridium purpureum. (Cell from Porphyridium purpureum)
- Lr6 (46 kDa, Protein from Porphyridium purpureum)
- Photosystem i p700 chlorophyll a apoprotein a1 (82 kDa, Protein from Porphyridium purpureum)
- Cytochrome b559 subunit beta (5 kDa, Protein from Porphyridium purpureum)
- Redcap (19 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein, chloroplastic (19 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin gamma subunit (18 kDa, Protein from Porphyridium purpureum)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit ii (14 kDa, Protein from Porphyridium purpureum)
- Photosystem ii protein y (3 kDa, Protein from Porphyridium purpureum)
- Psbm (10 kDa, Protein from Porphyridium purpureum)
- Photosystem ii protein d1 (39 kDa, Protein from Porphyridium purpureum)
- Phycobiliprotein apce (99 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 32.1 kda linker polypeptide, phycocyanin-associated, rod (53 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein k (5 kDa, Protein from Porphyridium purpureum)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- B-phycoerythrin beta chain (18 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein h (7 kDa, Protein from Porphyridium purpureum)
- Glycerol (92 Da, Ligand)
- Bicarbonate ion (61 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin beta subunit (17 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Porphyridium purpureum)
- Carsp2 (15 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Porphyridium purpureum)
- Lps1 (5 kDa, Protein from Porphyridium purpureum)
- Ferredoxin (10 kDa, Protein from Porphyridium purpureum)
- R-phycoerythrin gamma chain, chloroplastic (31 kDa, Protein from Porphyridium purpureum)
- Lrh (20 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin alpha subunit (17 kDa, Protein from Porphyridium purpureum)
- Beta-carotene (536 Da, Ligand)
- Photosystem i iron-sulfur center (8 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit iv (6 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein 1b-21, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 27.9 kda linker polypeptide, phycoerythrin-associated, rod (34 kDa, Protein from Porphyridium purpureum)
- C-phycocyanin beta subunit (18 kDa, Protein from Porphyridium purpureum)
- Photosystem ii cp43 reaction center protein (52 kDa, Protein from Porphyridium purpureum)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- Photosystem ii reaction center protein l (4 kDa, Protein from Porphyridium purpureum)
- Fucoxanthin-chlorophyll a-c binding protein, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- R-phycoerythrin gamma chain, chloroplastic (29 kDa, Protein from Porphyridium purpureum)
- Psb34 (2 kDa, Protein from Porphyridium purpureum)
- Phycobilisome rod-core linker polypeptide (26 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin beta 18 subunit (19 kDa, Protein from Porphyridium purpureum)
- Chloride ion (35 Da, Ligand)
- R-phycoerythrin gamma chain, chloroplastic (31 kDa, Protein from Porphyridium purpureum)
In situ single-PBS-PSII-PSI-LHCs megacomplex.
Release date: Feb. 1, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7y5e
Q-score: 0.318
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7y5e
Q-score: 0.318
You X, Zhang X, Cheng J, Xiao Y, Ma J, Sun S, Zhang X, Wang HW, Sui SF
Nature (2023) 616 pp. 199-206 [ DOI: doi:10.1038/s41586-023-05831-0 Pubmed: 36922595 ]
Sample:
- Photosystem i reaction center subunit viii (4 kDa, Protein from Porphyridium purpureum)
- B-phycoerythrin beta chain (18 kDa, Protein from Porphyridium purpureum)
- Phycoerythrin alpha subunit (17 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 27.9 kda linker polypeptide, phycoerythrin-associated, rod (37 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein of lhcii type iii, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein 1b-21, chloroplastic (19 kDa, Protein from Porphyridium purpureum)
- Psbq' (22 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein z (6 kDa, Protein from Porphyridium purpureum)
- Lps1 (5 kDa, Protein from Porphyridium purpureum)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Porphyridium purpureum)
- Psbw (3 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein, chloroplastic (19 kDa, Protein from Porphyridium purpureum)
- Photosystem ii protein y (3 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a-b binding protein 1b-21, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 31.8 kda linker polypeptide, phycoerythrin-associated, rod (39 kDa, Protein from Porphyridium purpureum)
- R-phycoerythrin gamma chain, chloroplastic (31 kDa, Protein from Porphyridium purpureum)
- C-phycocyanin alpha subunit (17 kDa, Protein from Porphyridium purpureum)
- Photosystem i iron-sulfur center (8 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Porphyridium purpureum)
- Beta-d-glucopyranose (180 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit ii (15 kDa, Protein from Porphyridium purpureum)
- Phycocyanobilin (588 Da, Ligand)
- Phycobilisome 27.9 kda linker polypeptide, phycoerythrin-associated, rod (34 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit iv (7 kDa, Protein from Porphyridium purpureum)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 31.8 kda linker polypeptide, phycoerythrin-associated, rod (46 kDa, Protein from Porphyridium purpureum)
- Carsp2 (36 kDa, Protein from Porphyridium purpureum)
- Fas1 domain-containing protein (26 kDa, Protein from Porphyridium purpureum)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Phycoerythrobilin (588 Da, Ligand)
- Glycerol (92 Da, Ligand)
- R-phycoerythrin gamma chain, chloroplastic (29 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 31.8 kda linker polypeptide, phycoerythrin-associated, rod (55 kDa, Protein from Porphyridium purpureum)
- Oxygen-evolving enhancer protein (30 kDa, Protein from Porphyridium purpureum)
- Chloride ion (35 Da, Ligand)
- Lpp1 (10 kDa, Protein from Porphyridium purpureum)
- Ps ii complex 12 kda extrinsic protein (16 kDa, Protein from Porphyridium purpureum)
- Phycourobilin (590 Da, Ligand)
- Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 31.8 kda linker polypeptide, phycoerythrin-associated, rod (32 kDa, Protein from Porphyridium purpureum)
- (2s)-2,3-dihydroxypropyl octadecanoate (358 Da, Ligand)
- R-phycoerythrin gamma chain, chloroplastic (31 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein t (3 kDa, Protein from Porphyridium purpureum)
- Cnt (10 kDa, Protein from Porphyridium purpureum)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Chlorophyll a-b binding protein 1b-21, chloroplastic (19 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein h (7 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin alpha subunit (17 kDa, Protein from Porphyridium purpureum)
- Fucoxanthin-chlorophyll a-c binding protein, chloroplastic (18 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein k (5 kDa, Protein from Porphyridium purpureum)
- Linker4 (14 kDa, Protein from Porphyridium purpureum)
- Beta-carotene (536 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Cytochrome b559 subunit beta (5 kDa, Protein from Porphyridium purpureum)
- Lrh (20 kDa, Protein from Porphyridium purpureum)
- Cytochrome c6 (11 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 32.1 kda linker polypeptide, phycocyanin-associated, rod (53 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center x protein (4 kDa, Protein from Porphyridium purpureum)
- Psaa (83 kDa, Protein from Porphyridium purpureum)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Lrc4 (16 kDa, Protein from Porphyridium purpureum)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (10 kDa, Protein from Porphyridium purpureum)
- Cytochrome c550 (17 kDa, Protein from Porphyridium purpureum)
- Lrc5 (30 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit psak (6 kDa, Protein from Porphyridium purpureum)
- Iron/sulfur cluster (351 Da, Ligand)
- Photosystem ii d2 protein (39 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein i (4 kDa, Protein from Porphyridium purpureum)
- Ferredoxin (10 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin beta subunit (17 kDa, Protein from Porphyridium purpureum)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Porphyridium purpureum)
- Photosystem ii protein d1 (39 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein j (3 kDa, Protein from Porphyridium purpureum)
- Water (18 Da, Ligand)
- Fas1 domain-containing protein (31 kDa, Protein from Porphyridium purpureum)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Porphyridium purpureum)
- Phycobiliprotein apce (99 kDa, Protein from Porphyridium purpureum)
- (1r,2s)-4-{(1e,3e,5e,7e,9e,11e,13e,15e,17e)-18-[(4s)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol (568 Da, Ligand)
- Psb34 (2 kDa, Protein from Porphyridium purpureum)
- Photosystem i subunit o (9 kDa, Protein from Porphyridium purpureum)
- Photosystem ii cp43 reaction center protein (52 kDa, Protein from Porphyridium purpureum)
- Phylloquinone (450 Da, Ligand)
- Phycobilisome rod-core linker polypeptide (26 kDa, Protein from Porphyridium purpureum)
- Carsps1 (31 kDa, Protein from Porphyridium purpureum)
- Psbm (10 kDa, Protein from Porphyridium purpureum)
- Psar (8 kDa, Protein from Porphyridium purpureum)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Redcap (19 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin beta 18 subunit (19 kDa, Protein from Porphyridium purpureum)
- Allophycocyanin gamma subunit (18 kDa, Protein from Porphyridium purpureum)
- Fe (iii) ion (55 Da, Ligand)
- C-phycocyanin beta subunit (18 kDa, Protein from Porphyridium purpureum)
- Psii_pbs31 domain-containing protein (22 kDa, Protein from Porphyridium purpureum)
- Pheophytin a (871 Da, Ligand)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- Bicarbonate ion (61 Da, Ligand)
- In situ single-pbs-psii-psi-lhcs megacomplex (Cell from Porphyridium purpureum)
- Lpp2 (17 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i reaction center subunit xi (14 kDa, Protein from Porphyridium purpureum)
- R-phycoerythrin gamma chain, chloroplastic (36 kDa, Protein from Porphyridium purpureum)
- Psbl (4 kDa, Protein from Porphyridium purpureum)
PSII-d3 of PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
You X, Zhang X, Cheng J, Xiao YN, Sun S, Sui SF
To Be Published
Sample:
- Photosystem ii reaction center protein h (7 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein k (5 kDa, Protein from Porphyridium purpureum)
- Photosystem ii cp43 reaction center protein (52 kDa, Protein from Porphyridium purpureum)
- Beta-carotene (536 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Cytochrome b559 subunit beta (5 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein i (4 kDa, Protein from Porphyridium purpureum)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Psbm (10 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center x protein (4 kDa, Protein from Porphyridium purpureum)
- Cnt (6 kDa, Protein from Porphyridium purpureum)
- Psbq' (22 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein z (6 kDa, Protein from Porphyridium purpureum)
- Psb34 (3 kDa, Protein from Porphyridium purpureum)
- Cytochrome c550 (17 kDa, Protein from Porphyridium purpureum)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Glycerol (92 Da, Ligand)
- Cnt (1 kDa, Protein from Porphyridium purpureum)
- Oxygen-evolving enhancer protein (30 kDa, Protein from Porphyridium purpureum)
- Photosystem ii d2 protein (39 kDa, Protein from Porphyridium purpureum)
- Chloride ion (35 Da, Ligand)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Porphyridium purpureum)
- Photosystem ii protein y (3 kDa, Protein from Porphyridium purpureum)
- Cnt (2 kDa, Protein from Porphyridium purpureum)
- Ps ii complex 12 kda extrinsic protein (16 kDa, Protein from Porphyridium purpureum)
- Fe (iii) ion (55 Da, Ligand)
- Psii_pbs31 domain-containing protein (22 kDa, Protein from Porphyridium purpureum)
- Lateral hexamer of pbs (Complex from Porphyridium purpureum)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Porphyridium purpureum)
- Pheophytin a (871 Da, Ligand)
- Photosystem ii reaction center protein j (3 kDa, Protein from Porphyridium purpureum)
- Bicarbonate ion (61 Da, Ligand)
- Lpp1 (5 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center psb28 protein (12 kDa, Protein from Porphyridium purpureum)
- Photosystem ii protein d1 (38 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a (893 Da, Ligand)
- Photosystem ii reaction center protein t (3 kDa, Protein from Porphyridium purpureum)
- Water (18 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem ii reaction center protein l (4 kDa, Protein from Porphyridium purpureum)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Porphyridium purpureum)
PSII-d1-d2 of PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
You X, Zhang X, Cheng J, Xiao YN, Sun S, Sui SF
To Be Published
Sample:
- Photosystem ii protein d1 (38 kDa, Protein from Porphyridium purpureum)
- Cytochrome b559 subunit beta (5 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein z (6 kDa, Protein from Porphyridium purpureum)
- Oxygen-evolving enhancer protein (30 kDa, Protein from Porphyridium purpureum)
- Chlorophyll a (893 Da, Ligand)
- Psbq' (22 kDa, Protein from Porphyridium purpureum)
- Psb34 (2 kDa, Protein from Porphyridium purpureum)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem ii reaction center x protein (4 kDa, Protein from Porphyridium purpureum)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Porphyridium purpureum)
- Beta-carotene (536 Da, Ligand)
- Ps ii complex 12 kda extrinsic protein (16 kDa, Protein from Porphyridium purpureum)
- Pheophytin a (871 Da, Ligand)
- Photosystem ii cp43 reaction center protein (52 kDa, Protein from Porphyridium purpureum)
- Photosystem ii protein y (3 kDa, Protein from Porphyridium purpureum)
- Psbm (10 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein j (3 kDa, Protein from Porphyridium purpureum)
- Psii_pbs31 domain-containing protein (22 kDa, Protein from Porphyridium purpureum)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- Photosystem ii reaction center protein l (4 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein t (3 kDa, Protein from Porphyridium purpureum)
- Photosystem ii d2 protein (39 kDa, Protein from Porphyridium purpureum)
- Water (18 Da, Ligand)
- Psb34 (1 kDa, Protein from Porphyridium purpureum)
- Cnt (1 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein k (5 kDa, Protein from Porphyridium purpureum)
- Fe (iii) ion (55 Da, Ligand)
- Cnt (2 kDa, Protein from Porphyridium purpureum)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Porphyridium purpureum)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Lateral hexamer of pbs (Complex from Porphyridium purpureum)
- Chloride ion (35 Da, Ligand)
- Photosystem ii reaction center protein i (4 kDa, Protein from Porphyridium purpureum)
- Cnt (5 kDa, Protein from Porphyridium purpureum)
- Photosystem ii reaction center protein h (7 kDa, Protein from Porphyridium purpureum)
- Glycerol (92 Da, Ligand)
- Photosystem ii reaction center psb28 protein (12 kDa, Protein from Porphyridium purpureum)
- Bicarbonate ion (61 Da, Ligand)
- Lpp1 (8 kDa, Protein from Porphyridium purpureum)
- Cytochrome c550 (17 kDa, Protein from Porphyridium purpureum)
Unstacked compact Dunaliella PSII
Release date: Aug. 17, 2022
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 7pi0
Q-score: 0.623
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 7pi0
Q-score: 0.623
Caspy I, Fadeeva M, Mazor Y, Nelson N
eLife (2023) 12 [ Pubmed: 36799903 DOI: doi:10.7554/eLife.81150 ]
Sample:
- Fe (ii) ion (55 Da, Ligand)
- Photosystem ii reaction center protein l (4 kDa, Protein from Dunaliella salina)
- (1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol (600 Da, Ligand)
- Cp29 (21 kDa, Protein from Dunaliella salina)
- Chlorophyll a (893 Da, Ligand)
- Chlorophyll b (907 Da, Ligand)
- Psbo (25 kDa, Protein from Dunaliella salina)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- 1,2-diacyl-glycerol-3-sn-phosphate (704 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Beta-carotene (536 Da, Ligand)
- Photosystem ii cp43 reaction center protein (49 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein i (3 kDa, Protein from Dunaliella salina)
- Pheophytin a (871 Da, Ligand)
- Sphingosine (299 Da, Ligand)
- Photosystem ii reaction center protein t (3 kDa, Protein from Dunaliella salina)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Dunaliella salina)
- Cytochrome b559 subunit beta (3 kDa, Protein from Dunaliella salina)
- Psbu (3 kDa, Protein from Dunaliella salina)
- (2s)-3-{[(r)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate (453 Da, Ligand)
- Lhcii m3 (24 kDa, Protein from Dunaliella salina)
- Psbw (4 kDa, Protein from Dunaliella salina)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- (1~{s})-3,5,5-trimethyl-4-[(1~{e},3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-[(4~{s})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol (568 Da, Ligand)
- Cp26 (26 kDa, Protein from Dunaliella salina)
- Cytochrome b559 subunit alpha (8 kDa, Protein from Dunaliella salina)
- Water (18 Da, Ligand)
- Photosystem ii reaction center protein j (3 kDa, Protein from Dunaliella salina)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem ii reaction center protein h (7 kDa, Protein from Dunaliella salina)
- Diacyl glycerol (625 Da, Ligand)
- Psbx (2 kDa, Protein from Dunaliella salina)
- Photosystem ii d2 protein (38 kDa, Protein from Dunaliella salina)
- Photosystem ii protein d1 (37 kDa, Protein from Dunaliella salina)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Chloride ion (35 Da, Ligand)
- Phosphatidylethanolamine (734 Da, Ligand)
- Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein k (4 kDa, Protein from Dunaliella salina)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- Dunaliella salina photosystem ii complex (Complex from Dunaliella salina)
- Bicarbonate ion (61 Da, Ligand)
- (3r)-beta,beta-caroten-3-ol (552 Da, Ligand)
- Psbp (20 kDa, Protein from Dunaliella salina)
- Psbm (3 kDa, Protein from Dunaliella salina)
- Lhcii m1 (23 kDa, Protein from Dunaliella salina)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Photosystem ii cp47 reaction center protein (53 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein z (6 kDa, Protein from Dunaliella salina)
Stacked compact Dunaliella PSII
Release date: Aug. 17, 2022
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7pin
Q-score: 0.328
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7pin
Q-score: 0.328
Caspy I, Fadeeva M, Mazor Y, Nelson N
eLife (2023) 12 [ Pubmed: 36799903 DOI: doi:10.7554/eLife.81150 ]
Sample:
- Tripalmitoylglycerol (807 Da, Ligand)
- (1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol (600 Da, Ligand)
- Phosphatidylethanolamine (734 Da, Ligand)
- Psbj (3 kDa, Protein from Dunaliella salina)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Beta-carotene (536 Da, Ligand)
- Photosystem ii cp43 reaction center protein (49 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein h (7 kDa, Protein from Dunaliella salina)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem ii d2 protein (38 kDa, Protein from Dunaliella salina)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Photosystem ii reaction center protein k (4 kDa, Protein from Dunaliella salina)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Lhcii m1 (23 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein z (6 kDa, Protein from Dunaliella salina)
- Ergosterol (396 Da, Ligand)
- Lhcii m3 (24 kDa, Protein from Dunaliella salina)
- Psbm (3 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein i (3 kDa, Protein from Dunaliella salina)
- Cp26 (26 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein l (4 kDa, Protein from Dunaliella salina)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Glycerol (92 Da, Ligand)
- Psbu (3 kDa, Protein from Dunaliella salina)
- Dunaliella salina photosystem ii complex (Complex from Dunaliella salina)
- 1,2-diacyl-glycerol-3-sn-phosphate (704 Da, Ligand)
- Psbx (2 kDa, Protein from Dunaliella salina)
- Sodium ion (22 Da, Ligand)
- (3r)-beta,beta-caroten-3-ol (552 Da, Ligand)
- Psbw (4 kDa, Protein from Dunaliella salina)
- Chlorophyll b (907 Da, Ligand)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Dunaliella salina)
- Psbp (20 kDa, Protein from Dunaliella salina)
- Chloride ion (35 Da, Ligand)
- Trimethyl-[(2~{r})-1-oxidanyl-1-oxidanylidene-4-[(2~{s})-2-[(1~{s})-1-oxidanyloctadecoxy]-3-[(1~{r})-1-oxidanyloctadecoxy]propoxy]butan-2-yl]azanium (773 Da, Ligand)
- Cytochrome b559 subunit alpha (8 kDa, Protein from Dunaliella salina)
- Photosystem ii reaction center protein t (3 kDa, Protein from Dunaliella salina)
- Pheophytin a (871 Da, Ligand)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- Cp29 (21 kDa, Protein from Dunaliella salina)
- Bicarbonate ion (61 Da, Ligand)
- Photosystem ii cp47 reaction center protein (53 kDa, Protein from Dunaliella salina)
- Psbo (25 kDa, Protein from Dunaliella salina)
- Chlorophyll a (893 Da, Ligand)
- Fe (ii) ion (55 Da, Ligand)
- Diacyl glycerol (625 Da, Ligand)
- (1~{s})-3,5,5-trimethyl-4-[(1~{e},3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-[(4~{s})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol (568 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Dunaliella salina)
- Cytochrome b559 subunit beta (3 kDa, Protein from Dunaliella salina)
- Photosystem ii protein d1 (37 kDa, Protein from Dunaliella salina)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Sphingosine (299 Da, Ligand)
- (2s)-3-{[(r)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate (453 Da, Ligand)
Release date: July 31, 2019
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 6jlu
Q-score: 0.385
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 6jlu
Q-score: 0.385
Pi X, Zhao S, Wang W, Liu D, Xu C, Han G, Kuang T, Sui SF, Shen JR
Science (2019) 365 [ DOI: doi:10.1126/science.aax4406 Pubmed: 31371578 ]
Sample:
- Psbt (3 kDa, Protein from Chaetoceros gracilis)
- Psbi (3 kDa, Protein from Chaetoceros gracilis)
- Photosystem ii reaction center protein h (7 kDa, Protein from Chaetoceros gracilis)
- Beta-carotene (536 Da, Ligand)
- Psbw (5 kDa, Protein from Chaetoceros gracilis)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Fcp-d (24 kDa, Protein from Chaetoceros gracilis)
- Psb31 (18 kDa, Protein from Chaetoceros gracilis)
- Psbg (6 kDa, Protein from Chaetoceros gracilis)
- Fcp-a (18 kDa, Protein from Chaetoceros gracilis)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Psbj (3 kDa, Protein from Chaetoceros gracilis)
- Extrinsic protein in photosystem ii (26 kDa, Protein from Chaetoceros gracilis)
- Extrinsic protein in photosystem ii (22 kDa, Protein from Chaetoceros gracilis)
- Ca-mn4-o5 cluster (339 Da, Ligand)
- Psii-fcp supercomplex (Complex from Chaetoceros gracilis)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Psbz (6 kDa, Protein from Chaetoceros gracilis)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Psba (39 kDa, Protein from Chaetoceros gracilis)
- Psbk (4 kDa, Protein from Chaetoceros gracilis)
- Psb34 (2 kDa, Protein from Chaetoceros gracilis)
- Extrinsic protein in photosystem ii (10 kDa, Protein from Chaetoceros gracilis)
- Chloride ion (35 Da, Ligand)
- Fcp-f (18 kDa, Protein from Chaetoceros gracilis)
- Psbm (4 kDa, Protein from Chaetoceros gracilis)
- Photosystem ii reaction center x protein (3 kDa, Protein from Chaetoceros gracilis)
- Pheophytin a (871 Da, Ligand)
- Fcp-e (18 kDa, Protein from Chaetoceros gracilis)
- Psbl (4 kDa, Protein from Chaetoceros gracilis)
- Bicarbonate ion (61 Da, Ligand)
- Chlorophyll c1 (610 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Psbc (49 kDa, Protein from Chaetoceros gracilis)
- (3s,3'r,5r,6s,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol (582 Da, Ligand)
- Psbd (37 kDa, Protein from Chaetoceros gracilis)
- Fe (ii) ion (55 Da, Ligand)
- Chlorophyll c2 (608 Da, Ligand)
- Water (18 Da, Ligand)
- Psby (3 kDa, Protein from Chaetoceros gracilis)
- Psbf (3 kDa, Protein from Chaetoceros gracilis)
- Cytochrome c-550 (14 kDa, Protein from Chaetoceros gracilis)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- (3s,3's,5r,5'r,6s,6'r,8'r)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'-yl acetate (658 Da, Ligand)
- Psbb (56 kDa, Protein from Chaetoceros gracilis)
- Psbe (9 kDa, Protein from Chaetoceros gracilis)